BLASTX 7.6.2
Query= RU17773 /QuerySize=474
(473 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G24510.1 | Symbols: | 60s acidic ribosomal pr... 92 1e-019
TAIR9_protein||AT1G01100.1 | Symbols: | 60S acidic ribosomal pr... 86 1e-017
TAIR9_protein||AT1G01100.2 | Symbols: | 60S acidic ribosomal pr... 86 1e-017
TAIR9_protein||AT1G01100.3 | Symbols: | 60S acidic ribosomal pr... 86 1e-017
TAIR9_protein||AT1G01100.4 | Symbols: | 60S acidic ribosomal pr... 86 1e-017
TAIR9_protein||AT5G47700.1 | Symbols: | 60S acidic ribosomal pr... 85 2e-017
TAIR9_protein||AT5G47700.2 | Symbols: | 60S acidic ribosomal pr... 85 2e-017
TAIR9_protein||AT4G00810.1 | Symbols: | 60S acidic ribosomal pr... 84 4e-017
TAIR9_protein||AT4G00810.2 | Symbols: | 60S acidic ribosomal pr... 84 4e-017
>TAIR9_protein||AT5G24510.1 | Symbols: | 60s acidic ribosomal protein P1,
putative | chr5:8369295-8369866 REVERSE
Length = 112
Score = 92 bits (228), Expect = 1e-019
Identities = 42/63 (66%), Positives = 53/63 (84%)
Frame = -3
Query: 420 MSTGEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLTM 241
MST E+AC YAA+ILHD+GI ITAE I+ L+K+ANVNVE+YWP+LFA L E+K++ L M
Sbjct: 1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60
Query: 240 NVG 232
NVG
Sbjct: 61 NVG 63
>TAIR9_protein||AT1G01100.1 | Symbols: | 60S acidic ribosomal protein P1
(RPP1A) | chr1:50284-50954 REVERSE
Length = 113
Score = 86 bits (210), Expect = 1e-017
Identities = 41/64 (64%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = -3
Query: 420 MST-GEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLT 244
MST GE+AC+YA MIL DEGI ITA+KIATL+K+A V++E+YWP LFA +AE++++ L
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60
Query: 243 MNVG 232
MNVG
Sbjct: 61 MNVG 64
>TAIR9_protein||AT1G01100.2 | Symbols: | 60S acidic ribosomal protein P1
(RPP1A) | chr1:50284-50954 REVERSE
Length = 113
Score = 86 bits (210), Expect = 1e-017
Identities = 41/64 (64%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = -3
Query: 420 MST-GEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLT 244
MST GE+AC+YA MIL DEGI ITA+KIATL+K+A V++E+YWP LFA +AE++++ L
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60
Query: 243 MNVG 232
MNVG
Sbjct: 61 MNVG 64
>TAIR9_protein||AT1G01100.3 | Symbols: | 60S acidic ribosomal protein P1
(RPP1A) | chr1:50284-50954 REVERSE
Length = 97
Score = 86 bits (210), Expect = 1e-017
Identities = 41/64 (64%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = -3
Query: 420 MST-GEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLT 244
MST GE+AC+YA MIL DEGI ITA+KIATL+K+A V++E+YWP LFA +AE++++ L
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60
Query: 243 MNVG 232
MNVG
Sbjct: 61 MNVG 64
>TAIR9_protein||AT1G01100.4 | Symbols: | 60S acidic ribosomal protein P1
(RPP1A) | chr1:50284-50954 REVERSE
Length = 113
Score = 86 bits (210), Expect = 1e-017
Identities = 41/64 (64%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = -3
Query: 420 MST-GEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLT 244
MST GE+AC+YA MIL DEGI ITA+KIATL+K+A V++E+YWP LFA +AE++++ L
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60
Query: 243 MNVG 232
MNVG
Sbjct: 61 MNVG 64
>TAIR9_protein||AT5G47700.1 | Symbols: | 60S acidic ribosomal protein P1
(RPP1C) | chr5:19328019-19328724 REVERSE
Length = 114
Score = 85 bits (209), Expect = 2e-017
Identities = 41/64 (64%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Frame = -3
Query: 420 MST-GEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLT 244
MST GE+AC+YA MIL DEGI ITA+KIATL+K+A V +E+YWP LFA +AE++++ L
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60
Query: 243 MNVG 232
MNVG
Sbjct: 61 MNVG 64
>TAIR9_protein||AT5G47700.2 | Symbols: | 60S acidic ribosomal protein P1
(RPP1C) | chr5:19328019-19328724 REVERSE
Length = 114
Score = 85 bits (209), Expect = 2e-017
Identities = 41/64 (64%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Frame = -3
Query: 420 MST-GEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLT 244
MST GE+AC+YA MIL DEGI ITA+KIATL+K+A V +E+YWP LFA +AE++++ L
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60
Query: 243 MNVG 232
MNVG
Sbjct: 61 MNVG 64
>TAIR9_protein||AT4G00810.1 | Symbols: | 60S acidic ribosomal protein P1
(RPP1B) | chr4:346179-346957 REVERSE
Length = 114
Score = 84 bits (206), Expect = 4e-017
Identities = 40/64 (62%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Frame = -3
Query: 420 MST-GEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLT 244
MST GE+AC+YA MIL DEGI IT++KIATL+K+A V +E+YWP LFA +AE++++ L
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60
Query: 243 MNVG 232
MNVG
Sbjct: 61 MNVG 64
>TAIR9_protein||AT4G00810.2 | Symbols: | 60S acidic ribosomal protein P1
(RPP1B) | chr4:346179-346957 REVERSE
Length = 114
Score = 84 bits (206), Expect = 4e-017
Identities = 40/64 (62%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Frame = -3
Query: 420 MST-GEVACAYAAMILHDEGIPITAEKIATLIKSANVNVEAYWPNLFANLAEQKDLGGLT 244
MST GE+AC+YA MIL DEGI IT++KIATL+K+A V +E+YWP LFA +AE++++ L
Sbjct: 1 MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60
Query: 243 MNVG 232
MNVG
Sbjct: 61 MNVG 64
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,143,694,496
Number of Sequences: 33410
Number of Extensions: 3143694496
Number of Successful Extensions: 171315246
Number of sequences better than 0.0: 0
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