BLASTX 7.6.2
Query= RU17906 /QuerySize=347
(346 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G36910.1 | Symbols: ATPGP1, PGP1, ABCB1 | ABCB... 91 1e-019
TAIR9_protein||AT3G28860.1 | Symbols: ATMDR1, ATMDR11, PGP19, MD... 60 3e-010
TAIR9_protein||AT4G25960.1 | Symbols: PGP2 | PGP2 (P-GLYCOPROTEI... 58 8e-010
>TAIR9_protein||AT2G36910.1 | Symbols: ATPGP1, PGP1, ABCB1 | ABCB1 (ATP BINDING
CASSETTE SUBFAMILY B1); ATPase, coupled to transmembrane movement of
substances / auxin efflux transmembrane transporter/ calmodulin binding
| chr2:15502162-15507050 FORWARD
Length = 1287
Score = 91 bits (224), Expect = 1e-019
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +2
Query: 185 KPEAVPSIGFGEVFRFADGLDYVLMGIGSVGAIVHGCSLPIFLRFFADLVNSFG 346
K + + F E+FRFADGLDYVLMGIGSVGA VHGCSLP+FLRFFADLVNSFG
Sbjct: 20 KKAEIRGVAFKELFRFADGLDYVLMGIGSVGAFVHGCSLPLFLRFFADLVNSFG 73
>TAIR9_protein||AT3G28860.1 | Symbols: ATMDR1, ATMDR11, PGP19, MDR11, MDR1,
ATPGP19, ABCB19, ATABCB19 | ABCB19; ATPase, coupled to transmembrane
movement of substances / auxin efflux transmembrane transporter |
chr3:10870287-10877286 REVERSE
Length = 1253
Score = 60 bits (143), Expect = 3e-010
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +2
Query: 203 SIGFGEVFRFADGLDYVLMGIGSVGAIVHGCSLPIFLRFFADLVNSFG 346
S+ F ++F FAD DY+LM +GS+GAIVHG S+P+F F +VN FG
Sbjct: 23 SLPFFKLFSFADKFDYLLMFVGSLGAIVHGSSMPVFFLLFGQMVNGFG 70
>TAIR9_protein||AT4G25960.1 | Symbols: PGP2 | PGP2 (P-GLYCOPROTEIN 2); ATPase,
coupled to transmembrane movement of substances |
chr4:13177438-13183425 FORWARD
Length = 1274
Score = 58 bits (139), Expect = 8e-010
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Frame = +2
Query: 125 MESSAEPTTKKESNDSGGGEKPEAVPSIGFGEVFRFADGLDYVLMGIGSVGAIVHGCSLP 304
M+ S +P +K EK P + ++F FAD D VLM +GSVGA +HG S+P
Sbjct: 41 MQPSGDPAPEK--------EKEMTQPKVSLLKLFSFADFYDCVLMTLGSVGACIHGASVP 92
Query: 305 IFLRFFADLVNSFG 346
IF FF L+N G
Sbjct: 93 IFFIFFGKLINIIG 106
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,143,694,496
Number of Sequences: 33410
Number of Extensions: 3143694496
Number of Successful Extensions: 171315246
Number of sequences better than 0.0: 0
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