Blast details for RU17907 (Arabidopsis)


BLASTX 7.6.2

Query= RU17907 /QuerySize=624
        (623 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G58030.1 | Symbols:  | transport protein parti...     49   2e-006

>TAIR9_protein||AT5G58030.1 | Symbols:  | transport protein particle (TRAPP)
        component Bet3 family protein | chr5:23487021-23488483 REVERSE

          Length = 196

 Score =  49 bits (116), Expect = 2e-006
 Identities = 27/50 (54%), Positives = 29/50 (58%)
 Frame = +3

Query: 198 G*MKLLPNVLDRPLSKGKQXXXXXXXXXXXXXXXQYSQTQVDNIA*LEPR 347
           G MK   NVLD+PLSKGKQ               QY+QTQVDNIA LE R
Sbjct:   5 GKMKQYSNVLDKPLSKGKQEVSLTAFAFLFSELVQYNQTQVDNIAELERR 54

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,143,694,496
Number of Sequences: 33410
Number of Extensions: 3143694496
Number of Successful Extensions: 171315246
Number of sequences better than 0.0: 0