BLASTX 7.6.2
Query= RU18131 /QuerySize=162
(161 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING... 117 2e-027
TAIR9_protein||AT3G20880.1 | Symbols: | zinc finger (C2H2 type)... 112 7e-026
TAIR9_protein||AT1G51220.1 | Symbols: | zinc finger (C2H2 type)... 111 2e-025
TAIR9_protein||AT1G08290.1 | Symbols: | zinc finger (C2H2 type)... 108 1e-024
TAIR9_protein||AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY O... 105 9e-024
TAIR9_protein||AT1G34790.1 | Symbols: TT1 | TT1 (transparent tes... 100 2e-022
TAIR9_protein||AT5G22890.1 | Symbols: | zinc finger (C2H2 type)... 53 4e-008
TAIR9_protein||AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive t... 49 7e-007
TAIR9_protein||AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive t... 49 7e-007
TAIR9_protein||AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive t... 49 7e-007
>TAIR9_protein||AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT);
nucleic acid binding / transcription factor/ zinc ion binding |
chr3:21370936-21373121 FORWARD
Length = 384
Score = 117 bits (292), Expect = 2e-027
Identities = 49/53 (92%)
Frame = +2
Query: 2 MCRKCGKAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKAFGQSHAA 160
MCRKCGKAFAVRGDWRTHEKNCGKLWYC CGSDFKHKRSLKDHIKAFG H A
Sbjct: 302 MCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGA 354
>TAIR9_protein||AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4)
| chr3:7313759-7315792 REVERSE
Length = 413
Score = 112 bits (278), Expect = 7e-026
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = +2
Query: 5 CRKCGKAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKAFGQSH 154
CR+CGKAFAV+GDWRTHEKNCGKLWYC+CGSDFKHKRSLKDH+KAFG H
Sbjct: 342 CRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGH 391
>TAIR9_protein||AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5)
| chr1:18989925-18992034 REVERSE
Length = 338
Score = 111 bits (275), Expect = 2e-025
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +2
Query: 5 CRKCGKAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKAFGQSH 154
CR CGKAFAV+GDWRTHEKNCGKLWYC+CGSDFKHKRSLKDH+KAFG H
Sbjct: 264 CRMCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGH 313
>TAIR9_protein||AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3)
| chr1:2610680-2613180 REVERSE
Length = 338
Score = 108 bits (268), Expect = 1e-024
Identities = 43/51 (84%), Positives = 47/51 (92%)
Frame = +2
Query: 5 CRKCGKAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKAFGQSHA 157
C KCGKA AV+GDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHI++FG H+
Sbjct: 267 CGKCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHS 317
>TAIR9_protein||AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED
TRIBUTARIES 5); transcription factor | chr1:4550366-4551527 REVERSE
Length = 303
Score = 105 bits (260), Expect = 9e-024
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = +2
Query: 8 RKCGKAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKAFGQSHAA 160
+KC K FAVRGDWRTHEKNCGKLW+C CGSDFKHKRSLKDH++AFG HAA
Sbjct: 190 KKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAA 240
>TAIR9_protein||AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1);
transcription factor | chr1:12763953-12765489 FORWARD
Length = 304
Score = 100 bits (248), Expect = 2e-022
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = +2
Query: 5 CRKCGKAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKAFGQSH 154
CR CGK AV+GDWRTHEKNCGK W C CGSDFKHKRSLKDH+KAFG H
Sbjct: 231 CRLCGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGH 280
>TAIR9_protein||AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr5:7653541-7654662 REVERSE
Length = 374
Score = 53 bits (125), Expect = 4e-008
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +2
Query: 5 CRKCG-KAFAVRGDWRTHEKNCGKL-WYCTCGSDFKHKRSLKDHIKAF 142
CR+C K F+V D RTHEK+CG + W C+CG+ F K L H+ F
Sbjct: 308 CRRCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSLF 355
>TAIR9_protein||AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion
binding | chr1:12551002-12552501 FORWARD
Length = 500
Score = 49 bits (114), Expect = 7e-007
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +2
Query: 5 CRKC-GKAFAVRGDWRTHEKNCGK-LWYCTCGSDFKHKRSLKDHIKAFGQSH 154
C +C K F+V D +THEK+CGK W C+CG+ F K L HI F Q H
Sbjct: 335 CSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALF-QGH 385
>TAIR9_protein||AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion
binding | chr1:12551002-12552501 FORWARD
Length = 500
Score = 49 bits (114), Expect = 7e-007
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +2
Query: 5 CRKC-GKAFAVRGDWRTHEKNCGK-LWYCTCGSDFKHKRSLKDHIKAFGQSH 154
C +C K F+V D +THEK+CGK W C+CG+ F K L HI F Q H
Sbjct: 335 CSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALF-QGH 385
>TAIR9_protein||AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion
binding | chr1:12551449-12552501 FORWARD
Length = 351
Score = 49 bits (114), Expect = 7e-007
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +2
Query: 5 CRKC-GKAFAVRGDWRTHEKNCGK-LWYCTCGSDFKHKRSLKDHIKAFGQSH 154
C +C K F+V D +THEK+CGK W C+CG+ F K L HI F Q H
Sbjct: 186 CSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALF-QGH 236
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,205,020,270
Number of Sequences: 33410
Number of Extensions: 3205020270
Number of Successful Extensions: 176401124
Number of sequences better than 0.0: 0
|