BLASTX 7.6.2
Query= RU18177 /QuerySize=404
(403 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 67 2e-012
TAIR9_protein||AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 67 2e-012
TAIR9_protein||AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 67 2e-012
TAIR9_protein||AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 67 2e-012
TAIR9_protein||AT5G48250.1 | Symbols: | zinc finger (B-box type... 62 8e-011
>TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 67 bits (163), Expect = 2e-012
Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 4/58 (6%)
Frame = -2
Query: 399 AQSNLSFSGVTGESSAGDCQDCGASSML-LMGEPPWCPPGPESS---FQSANRSNAVM 238
A SN+SFSGVTGESSAGD Q+CGASS + L GEPPW PP + + S R+NAVM
Sbjct: 263 AHSNISFSGVTGESSAGDFQECGASSSIQLSGEPPWYPPTLQDNNACSHSVTRNNAVM 320
>TAIR9_protein||AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 67 bits (163), Expect = 2e-012
Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 4/58 (6%)
Frame = -2
Query: 399 AQSNLSFSGVTGESSAGDCQDCGASSML-LMGEPPWCPPGPESS---FQSANRSNAVM 238
A SN+SFSGVTGESSAGD Q+CGASS + L GEPPW PP + + S R+NAVM
Sbjct: 263 AHSNISFSGVTGESSAGDFQECGASSSIQLSGEPPWYPPTLQDNNACSHSVTRNNAVM 320
>TAIR9_protein||AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 67 bits (163), Expect = 2e-012
Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 4/58 (6%)
Frame = -2
Query: 399 AQSNLSFSGVTGESSAGDCQDCGASSML-LMGEPPWCPPGPESS---FQSANRSNAVM 238
A SN+SFSGVTGESSAGD Q+CGASS + L GEPPW PP + + S R+NAVM
Sbjct: 263 AHSNISFSGVTGESSAGDFQECGASSSIQLSGEPPWYPPTLQDNNACSHSVTRNNAVM 320
>TAIR9_protein||AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 67 bits (163), Expect = 2e-012
Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 4/58 (6%)
Frame = -2
Query: 399 AQSNLSFSGVTGESSAGDCQDCGASSML-LMGEPPWCPPGPESS---FQSANRSNAVM 238
A SN+SFSGVTGESSAGD Q+CGASS + L GEPPW PP + + S R+NAVM
Sbjct: 263 AHSNISFSGVTGESSAGDFQECGASSSIQLSGEPPWYPPTLQDNNACSHSVTRNNAVM 320
>TAIR9_protein||AT5G48250.1 | Symbols: | zinc finger (B-box type) family
protein | chr5:19561719-19563113 REVERSE
Length = 374
Score = 62 bits (150), Expect = 8e-011
Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 5/59 (8%)
Frame = -2
Query: 399 AQSNLSFSGVTGESSAGDCQDCGASSM-LLMGEP-PWCPPGPE---SSFQSANRSNAVM 238
A SN+SFSG+TGES+AGD QDCGASSM L EP PWC P + +S + R+NAVM
Sbjct: 263 AHSNISFSGITGESNAGDFQDCGASSMKQLSREPQPWCHPTAQDIIASSHATTRNNAVM 321
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,205,020,270
Number of Sequences: 33410
Number of Extensions: 3205020270
Number of Successful Extensions: 176401124
Number of sequences better than 0.0: 0
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