BLASTX 7.6.2
Query= RU18255 /QuerySize=316
(315 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G02530.1 | Symbols: | chaperonin, putative | ... 152 5e-038
TAIR9_protein||AT5G16070.1 | Symbols: | chaperonin, putative | ... 152 5e-038
TAIR9_protein||AT3G18190.1 | Symbols: | chaperonin, putative | ... 55 5e-009
TAIR9_protein||AT1G24510.1 | Symbols: | T-complex protein 1 eps... 54 2e-008
TAIR9_protein||AT3G20050.1 | Symbols: ATTCP-1 | ATTCP-1; ATP bin... 54 2e-008
TAIR9_protein||AT3G11830.1 | Symbols: | chaperonin, putative | ... 49 5e-007
>TAIR9_protein||AT3G02530.1 | Symbols: | chaperonin, putative |
chr3:528806-532457 REVERSE
Length = 536
Score = 152 bits (382), Expect = 5e-038
Identities = 77/80 (96%), Positives = 79/80 (98%)
Frame = -3
Query: 241 MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGSGDIKLTKDGN 62
MS+RVLNPNAEVLNKSAALHM INAAKGLQDVLK+NLGPKGTIKMLVGGSGDIKLTKDGN
Sbjct: 1 MSVRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGN 60
Query: 61 TLLKEMQIQNPTAIMIARTA 2
TLLKEMQIQNPTAIMIARTA
Sbjct: 61 TLLKEMQIQNPTAIMIARTA 80
>TAIR9_protein||AT5G16070.1 | Symbols: | chaperonin, putative |
chr5:5247549-5251050 REVERSE
Length = 536
Score = 152 bits (382), Expect = 5e-038
Identities = 77/80 (96%), Positives = 79/80 (98%)
Frame = -3
Query: 241 MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGSGDIKLTKDGN 62
MS+RVLNPNAEVLNKSAALHM INAAKGLQDVLK+NLGPKGTIKMLVGGSGDIKLTKDGN
Sbjct: 1 MSVRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGN 60
Query: 61 TLLKEMQIQNPTAIMIARTA 2
TLLKEMQIQNPTAIMIARTA
Sbjct: 61 TLLKEMQIQNPTAIMIARTA 80
>TAIR9_protein||AT3G18190.1 | Symbols: | chaperonin, putative |
chr3:6232226-6233836 FORWARD
Length = 537
Score = 55 bits (132), Expect = 5e-009
Identities = 23/55 (41%), Positives = 39/55 (70%)
Frame = -3
Query: 178 NINAAKGLQDVLKTNLGPKGTIKMLVGGSGDIKLTKDGNTLLKEMQIQNPTAIMI 14
NIN+A+ + D ++T+LGPKG KM+ +G++ +T DG T+L +M++ P A M+
Sbjct: 33 NINSARAVSDAVRTSLGPKGMDKMISTANGEVIITNDGATILNKMEVLQPAAKML 87
>TAIR9_protein||AT1G24510.1 | Symbols: | T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin, putative |
chr1:8685504-8688101 REVERSE
Length = 536
Score = 54 bits (128), Expect = 2e-008
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = -3
Query: 178 NINAAKGLQDVLKTNLGPKGTIKMLVGGSGDIKLTKDGNTLLKEMQIQNPTA 23
NI A K + +L+++LGPKG KML G GDI +T DG T+L++M + N A
Sbjct: 33 NIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGATILEQMDVDNQIA 84
>TAIR9_protein||AT3G20050.1 | Symbols: ATTCP-1 | ATTCP-1; ATP binding / protein
binding / unfolded protein binding | chr3:6998544-7002266 REVERSE
Length = 546
Score = 54 bits (128), Expect = 2e-008
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = -3
Query: 241 MSLRVLNPNAEVLNKSA--ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGSGDIKLTKD 68
MS+ NP+ +S N+ A + + +++KT+LGP G KMLV GD+ +T D
Sbjct: 1 MSISAQNPDISGDRQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITND 60
Query: 67 GNTLLKEMQIQNPTAIMIARTA 2
G T+L+ +++++P A ++ A
Sbjct: 61 GATILRMLEVEHPAAKVLVELA 82
>TAIR9_protein||AT3G11830.1 | Symbols: | chaperonin, putative |
chr3:3732734-3736156 FORWARD
Length = 558
Score = 49 bits (115), Expect = 5e-007
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = -3
Query: 229 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGSGDIKLTKDGNTLLK 50
+L + A L NINA + DV++T LGP+G K++ G + ++ DG T++K
Sbjct: 11 LLKEGTDTSQGKAQLVSNINACTAVGDVVRTTLGPRGMDKLIHDDKGSVTISNDGATIMK 70
Query: 49 EMQIQNPTAIMIARTA 2
+ I +P A ++ A
Sbjct: 71 LLDIVHPAAKILVDIA 86
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,205,020,270
Number of Sequences: 33410
Number of Extensions: 3205020270
Number of Successful Extensions: 176401124
Number of sequences better than 0.0: 0
|