BLASTX 7.6.2
Query= RU18508 /QuerySize=239
(238 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G00150.1 | Symbols: | scarecrow-like transcri... 79 4e-016
TAIR9_protein||AT3G60630.1 | Symbols: | scarecrow transcription... 71 1e-013
TAIR9_protein||AT2G45160.1 | Symbols: | scarecrow transcription... 64 1e-011
>TAIR9_protein||AT4G00150.1 | Symbols: | scarecrow-like transcription factor 6
(SCL6) | chr4:57429-59105 REVERSE
Length = 559
Score = 79 bits (194), Expect = 4e-016
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 RSDLPFPQHIRQALQSYINLLESLDAVNVTSDAVNKIERFLLQPKIESTVLGRLRTPDK- 177
R+DLPF Q + +L S+ L ESLDAVN DA+ KIERFL+QP+IE VL R R ++
Sbjct: 432 RTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKIERFLIQPEIEKLVLDRSRPIERP 491
Query: 178 MPLWKTLFASAGFTPLSFSN 237
M W+ +F GF+P++ SN
Sbjct: 492 MMTWQAMFLQMGFSPVTHSN 511
>TAIR9_protein||AT3G60630.1 | Symbols: | scarecrow transcription factor family
protein | chr3:22410496-22412367 REVERSE
Length = 624
Score = 71 bits (172), Expect = 1e-013
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +1
Query: 4 SDLPFPQHIRQALQSYINLLESLDAVNV-TSDAVNKIERFLLQPKIESTVLGRLRTPDKM 180
+D PFP + ALQ Y +LLESLD+ N+ ++A IERF +QP I+ + R R ++
Sbjct: 498 NDAPFPNGVINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLTNRYRWMERS 557
Query: 181 PLWKTLFASAGFTPLSFS 234
P W++LF GFTP++ S
Sbjct: 558 PPWRSLFGQCGFTPVTLS 575
>TAIR9_protein||AT2G45160.1 | Symbols: | scarecrow transcription factor family
protein | chr2:18618110-18620032 REVERSE
Length = 641
Score = 64 bits (155), Expect = 1e-011
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +1
Query: 1 RSDLPFPQHIRQALQSYINLLESLDAVNVTSDAVNKIERFLLQPKIESTVLGRLRTPDKM 180
R+D PFP + +LQ + +LLESLDA D + IERF +QP IE ++ R R ++
Sbjct: 520 RNDAPFPNAVIHSLQYHTSLLESLDANQNQDD--SSIERFWVQPSIEKLLMKRHRWIERS 577
Query: 181 PLWKTLFASAGFTPLSFS 234
P W+ LF GF+P S S
Sbjct: 578 PPWRILFTQCGFSPASLS 595
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,265,036,286
Number of Sequences: 33410
Number of Extensions: 3265036286
Number of Successful Extensions: 181357017
Number of sequences better than 0.0: 0
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