BLASTX 7.6.2
Query= RU19178 /QuerySize=607
(606 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G66320.1 | Symbols: | zinc finger (GATA type)... 56 1e-008
TAIR9_protein||AT5G66320.2 | Symbols: | zinc finger (GATA type)... 56 1e-008
TAIR9_protein||AT5G25830.1 | Symbols: | zinc finger (GATA type)... 54 6e-008
>TAIR9_protein||AT5G66320.1 | Symbols: | zinc finger (GATA type) family protein
| chr5:26496208-26497309 REVERSE
Length = 340
Score = 56 bits (134), Expect = 1e-008
Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Frame = +3
Query: 240 SQLAVPDDDLAELEWVSHFVDDSVSELS--LLHPVSKQKPESLTENRSEPEARRLGQSRL 413
S+L++P DDLA LEW+SHFV+DS +E S L +KP LT +R P +
Sbjct: 101 SELSLPADDLANLEWLSHFVEDSFTEYSGPNLTGTPTEKPAWLTGDRKHPVT---AVTEE 157
Query: 414 SWLPSQVPVKARSKRCR 464
+ S VP KARSKR R
Sbjct: 158 TCFKSPVPAKARSKRNR 174
>TAIR9_protein||AT5G66320.2 | Symbols: | zinc finger (GATA type) family protein
| chr5:26496208-26497309 REVERSE
Length = 340
Score = 56 bits (134), Expect = 1e-008
Identities = 35/77 (45%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Frame = +3
Query: 240 SQLAVPDDDLAELEWVSHFVDDSVSELS--LLHPVSKQKPESLTENRSEPEARRLGQSRL 413
S+L++P DDLA LEW+SHFV+DS +E S L +KP LT +R P +
Sbjct: 101 SELSLPADDLANLEWLSHFVEDSFTEYSGPNLTGTPTEKPAWLTGDRKHPVT---AVTEE 157
Query: 414 SWLPSQVPVKARSKRCR 464
+ S VP KARSKR R
Sbjct: 158 TCFKSPVPAKARSKRNR 174
>TAIR9_protein||AT5G25830.1 | Symbols: | zinc finger (GATA type) family protein
| chr5:9004398-9005502 REVERSE
Length = 332
Score = 54 bits (128), Expect = 6e-008
Identities = 47/152 (30%), Positives = 67/152 (44%), Gaps = 16/152 (10%)
Frame = +3
Query: 57 SEDFSVDDLL-DFSNGEFEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTEST 233
+ DF+VDDLL DFSN + E+ ++
Sbjct: 11 TSDFAVDDLLVDFSNDDDEENDVVADSTTTTTITDSSNFSAADLPSFHGDVQDG----TS 66
Query: 234 LASQLAVPDDDLA-ELEWVSHFVDDSVS-----ELSLLHPV-SKQKPESLTENRSEPEAR 392
+ L +P DDLA ELEW+S+ VD+S+S +L L+ S+ P+S T + P +
Sbjct: 67 FSGDLCIPSDDLADELEWLSNIVDESLSPEDVHKLELISGFKSRPDPKSDTGSPENPNS- 125
Query: 393 RLGQSRLSWLPSQVPVKARSKRCRPAAGRFRS 488
S + VP KARSKR R AA + S
Sbjct: 126 ---SSPIFTTDVSVPAKARSKRSRAAACNWAS 154
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,385,719,124
Number of Sequences: 33410
Number of Extensions: 3385719124
Number of Successful Extensions: 191716271
Number of sequences better than 0.0: 0
|