BLASTX 7.6.2
Query= RU19212 /QuerySize=288
(287 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G33490.1 | Symbols: | hydroxyproline-rich gly... 47 2e-006
TAIR9_protein||AT5G41100.1 | Symbols: | FUNCTIONS IN: molecular... 47 3e-006
TAIR9_protein||AT5G41100.2 | Symbols: | FUNCTIONS IN: molecular... 47 3e-006
>TAIR9_protein||AT2G33490.1 | Symbols: | hydroxyproline-rich glycoprotein
family protein | chr2:14183552-14187666 FORWARD
Length = 624
Score = 47 bits (110), Expect = 2e-006
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +1
Query: 148 KSSFDKLRRFELYKSGSKDKRNFQPSAHVDELAQASQDMQDMRNCY 285
K+S +LR L+K SKD+R+ + DELAQASQD++DMR+CY
Sbjct: 2 KTSLRRLRGV-LHKHESKDRRDLRALVQKDELAQASQDVEDMRDCY 46
>TAIR9_protein||AT5G41100.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein (TAIR:AT3G26910.2); Has
1264 Blast hits to 964 proteins in 165 species: Archae - 2; Bacteria -
75; Metazoa - 445; Fungi - 228; Plants - 134; Viruses - 35; Other
Eukaryotes - 345 (source: NCBI BLink). | chr5:16447429-16450610
FORWARD
Length = 587
Score = 47 bits (109), Expect = 3e-006
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +1
Query: 145 MKSSFDKLRRFELYKSGSKDKRNFQPSAHVDELAQASQDMQDMRNCY 285
MK+SF +LRRF L K+ + D P+A ++ LA+A++DMQDMR Y
Sbjct: 2 MKASFGRLRRFALPKADAIDIGELFPTAQIEGLARAAKDMQDMREGY 48
>TAIR9_protein||AT5G41100.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein (TAIR:AT3G26910.2); Has
1257 Blast hits to 957 proteins in 161 species: Archae - 2; Bacteria -
67; Metazoa - 448; Fungi - 227; Plants - 135; Viruses - 33; Other
Eukaryotes - 345 (source: NCBI BLink). | chr5:16447429-16450686
FORWARD
Length = 583
Score = 47 bits (109), Expect = 3e-006
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +1
Query: 145 MKSSFDKLRRFELYKSGSKDKRNFQPSAHVDELAQASQDMQDMRNCY 285
MK+SF +LRRF L K+ + D P+A ++ LA+A++DMQDMR Y
Sbjct: 2 MKASFGRLRRFALPKADAIDIGELFPTAQIEGLARAAKDMQDMREGY 48
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,385,719,124
Number of Sequences: 33410
Number of Extensions: 3385719124
Number of Successful Extensions: 191716271
Number of sequences better than 0.0: 0
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