BLASTX 7.6.2
Query= RU19377 /QuerySize=605
(604 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G05560.1 | Symbols: | 60S ribosomal protein L... 152 2e-037
TAIR9_protein||AT3G05560.2 | Symbols: | 60S ribosomal protein L... 152 2e-037
TAIR9_protein||AT3G05560.3 | Symbols: | 60S ribosomal protein L... 152 2e-037
TAIR9_protein||AT5G27770.1 | Symbols: | 60S ribosomal protein L... 151 5e-037
TAIR9_protein||AT1G02830.1 | Symbols: | 60S ribosomal protein L... 123 9e-029
>TAIR9_protein||AT3G05560.1 | Symbols: | 60S ribosomal protein L22-2 (RPL22B) |
chr3:1614641-1615204 FORWARD
Length = 125
Score = 152 bits (382), Expect = 2e-037
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = +1
Query: 91 MSRXXXXXXXXXXXXXSFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVS 270
MSR SF IDC KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSVT++
Sbjct: 1 MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60
Query: 271 REKNKITVTSDNTFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRNVYELRYFNIA 438
REK+KITVT+D FS HNVRDWLRVIA+NKDRN+YELRYFNIA
Sbjct: 61 REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIA 116
>TAIR9_protein||AT3G05560.2 | Symbols: | 60S ribosomal protein L22-2 (RPL22B) |
chr3:1614641-1615204 FORWARD
Length = 125
Score = 152 bits (382), Expect = 2e-037
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = +1
Query: 91 MSRXXXXXXXXXXXXXSFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVS 270
MSR SF IDC KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSVT++
Sbjct: 1 MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60
Query: 271 REKNKITVTSDNTFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRNVYELRYFNIA 438
REK+KITVT+D FS HNVRDWLRVIA+NKDRN+YELRYFNIA
Sbjct: 61 REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIA 116
>TAIR9_protein||AT3G05560.3 | Symbols: | 60S ribosomal protein L22-2 (RPL22B) |
chr3:1614641-1615204 FORWARD
Length = 125
Score = 152 bits (382), Expect = 2e-037
Identities = 77/116 (66%), Positives = 85/116 (73%)
Frame = +1
Query: 91 MSRXXXXXXXXXXXXXSFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVS 270
MSR SF IDC KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSVT++
Sbjct: 1 MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60
Query: 271 REKNKITVTSDNTFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRNVYELRYFNIA 438
REK+KITVT+D FS HNVRDWLRVIA+NKDRN+YELRYFNIA
Sbjct: 61 REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIA 116
>TAIR9_protein||AT5G27770.1 | Symbols: | 60S ribosomal protein L22 (RPL22C) |
chr5:9836166-9837113 FORWARD
Length = 125
Score = 151 bits (379), Expect = 5e-037
Identities = 76/116 (65%), Positives = 85/116 (73%)
Frame = +1
Query: 91 MSRXXXXXXXXXXXXXSFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVS 270
MSR SF IDC KPV+DKIM+IASLEKFLQERIKVGGKAGALGDSV+++
Sbjct: 1 MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60
Query: 271 REKNKITVTSDNTFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRNVYELRYFNIA 438
REK+KITVT+D FS HNVRDWLRVIA+NKDRN+YELRYFNIA
Sbjct: 61 REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIA 116
>TAIR9_protein||AT1G02830.1 | Symbols: | 60S ribosomal protein L22 (RPL22A) |
chr1:625145-625608 REVERSE
Length = 128
Score = 123 bits (308), Expect = 9e-029
Identities = 60/99 (60%), Positives = 75/99 (75%)
Frame = +1
Query: 139 SFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKNKITVTSDNTFSX 318
SFVIDC KPV+D I++IA+LEKFLQERIKV GKAGALG+SV+++R KI V +++ FS
Sbjct: 19 SFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVSITRYNGKINVNANSNFSK 78
Query: 319 XXXXXXXXXXXXXHNVRDWLRVIASNKDRNVYELRYFNI 435
+N+RDWLRVIASNKD+NVYE+RYF I
Sbjct: 79 RYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRI 117
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,385,719,124
Number of Sequences: 33410
Number of Extensions: 3385719124
Number of Successful Extensions: 191716271
Number of sequences better than 0.0: 0
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