BLASTX 7.6.2
Query= RU19828 /QuerySize=232
(231 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G49665.1 | Symbols: | zinc finger (C3HC4-type... 145 7e-036
TAIR9_protein||AT2G38970.1 | Symbols: | zinc finger (C3HC4-type... 89 5e-019
TAIR9_protein||AT3G54780.1 | Symbols: | zinc finger (C3HC4-type... 86 5e-018
TAIR9_protein||AT3G54780.2 | Symbols: | zinc finger (C3HC4-type... 86 5e-018
TAIR9_protein||AT3G54780.3 | Symbols: | zinc finger (C3HC4-type... 83 3e-017
TAIR9_protein||AT5G60710.1 | Symbols: | zinc finger (C3HC4-type... 81 1e-016
TAIR9_protein||AT4G37890.2 | Symbols: EDA40 | EDA40 (embryo sac ... 80 2e-016
TAIR9_protein||AT4G37890.1 | Symbols: EDA40 | EDA40 (embryo sac ... 79 5e-016
TAIR9_protein||AT2G22680.1 | Symbols: | zinc finger (C3HC4-type... 78 8e-016
TAIR9_protein||AT1G08050.1 | Symbols: | zinc finger (C3HC4-type... 75 7e-015
TAIR9_protein||AT5G65683.1 | Symbols: | zinc finger (C3HC4-type... 52 8e-008
>TAIR9_protein||AT5G49665.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:20167119-20169420 REVERSE
Length = 741
Score = 145 bits (364), Expect = 7e-036
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +1
Query: 1 SPRSPLKLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECSHAFHFPCIASYVRKHGSL 180
SPRSPLKLSLF+NSFKFRS+CGICLNSVKTGQGTA YTAECSHAFHFPCIA YVRK G L
Sbjct: 102 SPRSPLKLSLFRNSFKFRSTCGICLNSVKTGQGTAKYTAECSHAFHFPCIADYVRKQGKL 161
Query: 181 VCPVCNSTWKDVPLL 225
VCPVCNS WKD LL
Sbjct: 162 VCPVCNSIWKDASLL 176
>TAIR9_protein||AT2G38970.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:16274135-16276651 FORWARD
Length = 693
Score = 89 bits (219), Expect = 5e-019
Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 22 LSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECSHAFHFPCIASYVRKHGSLVCPVCNS 201
L L +NS K +C ICLN +K G G A++TAECSH+FHF CIAS V KHG+ VCPVC +
Sbjct: 59 LKLSRNSSKSSKTCSICLNKMKEGGGHALFTAECSHSFHFHCIASNV-KHGNQVCPVCRA 117
Query: 202 TWKDVPL 222
WK++P+
Sbjct: 118 KWKEIPM 124
>TAIR9_protein||AT3G54780.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:20278985-20281429 FORWARD
Length = 676
Score = 86 bits (210), Expect = 5e-018
Identities = 39/71 (54%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 SPLKLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECSHAFHFPCIASYVRKHGSLVCP 189
S + L ++S K +C ICLN +K G G AI+TAECSH FHF CIAS V KHG+ VCP
Sbjct: 57 SSYRRRLSRSSSKSSKTCSICLNKMKEGCGHAIFTAECSHMFHFHCIASNV-KHGNQVCP 115
Query: 190 VCNSTWKDVPL 222
VC + WK++P+
Sbjct: 116 VCRAKWKEIPI 126
>TAIR9_protein||AT3G54780.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:20278985-20281429 FORWARD
Length = 633
Score = 86 bits (210), Expect = 5e-018
Identities = 39/71 (54%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 SPLKLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECSHAFHFPCIASYVRKHGSLVCP 189
S + L ++S K +C ICLN +K G G AI+TAECSH FHF CIAS V KHG+ VCP
Sbjct: 57 SSYRRRLSRSSSKSSKTCSICLNKMKEGCGHAIFTAECSHMFHFHCIASNV-KHGNQVCP 115
Query: 190 VCNSTWKDVPL 222
VC + WK++P+
Sbjct: 116 VCRAKWKEIPI 126
>TAIR9_protein||AT3G54780.3 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:20278985-20281429 FORWARD
Length = 634
Score = 83 bits (203), Expect = 3e-017
Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Frame = +1
Query: 1 SPRSPLKLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECSHAFHFPCIASYVRKHGSL 180
S R L S K+S + +C ICLN +K G G AI+TAECSH FHF CIAS V KHG+
Sbjct: 58 SYRRRLSRSSSKSS---KQTCSICLNKMKEGCGHAIFTAECSHMFHFHCIASNV-KHGNQ 113
Query: 181 VCPVCNSTWKDVPL 222
VCPVC + WK++P+
Sbjct: 114 VCPVCRAKWKEIPI 127
>TAIR9_protein||AT5G60710.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:24410953-24414849 REVERSE
Length = 705
Score = 81 bits (199), Expect = 1e-016
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 SPLKLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECSHAFHFPCIASYVRKHGSLVCP 189
S L+L + + +C ICL ++K GQG AI+TAECSH+FHF CI + V KHG+ +CP
Sbjct: 55 SGLRLPRSMSKSSSKKTCAICLTAMKAGQGHAIFTAECSHSFHFQCITTNV-KHGNQICP 113
Query: 190 VCNSTWKDVPL 222
VC + W ++P+
Sbjct: 114 VCRAKWNEIPI 124
>TAIR9_protein||AT4G37890.2 | Symbols: EDA40 | EDA40 (embryo sac development
arrest 40); protein binding / ubiquitin-protein ligase/ zinc ion
binding | chr4:17812812-17815031 REVERSE
Length = 712
Score = 80 bits (196), Expect = 2e-016
Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = +1
Query: 19 KLSLFKNSFKFRSSCGICLNSVKTGQGTAIYTAECSHAFHFPCIASYVRKHGSLV-CPVC 195
KL K+S S CGICL S K G+GTAI+TAECSH FHFPC+AS L CPVC
Sbjct: 128 KLCFTKSSIS-SSKCGICLQSAKAGRGTAIFTAECSHTFHFPCVASRAGDRNLLSDCPVC 186
Query: 196 NSTWKDVPLLAM 231
++W++ LL +
Sbjct: 187 GASWRETSLLPL 198
>TAIR9_protein||AT4G37890.1 | Symbols: EDA40 | EDA40 (embryo sac development
arrest 40); protein binding / ubiquitin-protein ligase/ zinc ion
binding | chr4:17812812-17815031 REVERSE
Length = 740
Score = 79 bits (193), Expect = 5e-016
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +1
Query: 55 SSCGICLNSVKTGQGTAIYTAECSHAFHFPCIASYVRKHGSLV-CPVCNSTWKDVPLLAM 231
S CGICL S K G+GTAI+TAECSH FHFPC+AS L CPVC ++W++ LL +
Sbjct: 167 SKCGICLQSAKAGRGTAIFTAECSHTFHFPCVASRAGDRNLLSDCPVCGASWRETSLLPL 226
>TAIR9_protein||AT2G22680.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:9645433-9647484 FORWARD
Length = 684
Score = 78 bits (191), Expect = 8e-016
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 6/70 (8%)
Frame = +1
Query: 13 PLKLSLFKNSFKFRSS----CGICLNSVKTGQGTAIYTAECSHAFHFPCIAS-YVRKHGS 177
P +L K+ +F+ S CGICL SVK+GQGTAI+TAECSH FHFPC+ S H
Sbjct: 110 PASFTLLKSKLRFKQSSSNKCGICLQSVKSGQGTAIFTAECSHTFHFPCVTSRAAANHNR 169
Query: 178 LV-CPVCNST 204
L CPVC S+
Sbjct: 170 LASCPVCGSS 179
>TAIR9_protein||AT1G08050.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:2499088-2501311 REVERSE
Length = 642
Score = 75 bits (183), Expect = 7e-015
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Frame = +1
Query: 52 RSSCGICLNSVKTGQGTAIYTAECSHAFHFPCIASYVRKHGSLVCPVCNSTWKDVPL 222
+ C ICL ++ G AI+TAECSH+FHF CI S V KHG+ +CP+C + WK VPL
Sbjct: 66 KGRCAICLYEIRKEDGKAIFTAECSHSFHFDCITSNV-KHGNRICPLCRTQWKQVPL 121
>TAIR9_protein||AT5G65683.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:26261472-26263704 FORWARD
Length = 718
Score = 52 bits (122), Expect = 8e-008
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Frame = +1
Query: 55 SSCGICLNSVKTGQG---TAIYTAECSHAFHFPCIASYVRKHGSLVCPVCNSTWKDVP 219
S C ICL V + Q AI+TAECSH+FH C+ K CP C++ W P
Sbjct: 138 SRCAICLQRVNSNQSNSTAAIFTAECSHSFHLSCVNGLEDKR----CPFCSAAWNHAP 191
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,444,325,396
Number of Sequences: 33410
Number of Extensions: 3444325396
Number of Successful Extensions: 191925846
Number of sequences better than 0.0: 0
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