BLASTX 7.6.2
Query= RU20133 /QuerySize=542
(541 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G24490.1 | Symbols: | transcription factor | ... 92 2e-019
TAIR9_protein||AT3G58630.1 | Symbols: | transcription factor | ... 65 2e-011
TAIR9_protein||AT3G11100.1 | Symbols: | transcription factor | ... 59 1e-009
TAIR9_protein||AT5G05550.1 | Symbols: | transcription factor | ... 57 5e-009
TAIR9_protein||AT5G05550.2 | Symbols: | transcription factor | ... 57 5e-009
TAIR9_protein||AT1G54060.1 | Symbols: ASIL1 | ASIL1 (ARABIDOPSIS... 50 8e-007
>TAIR9_protein||AT3G24490.1 | Symbols: | transcription factor |
chr3:8911022-8912023 FORWARD
Length = 334
Score = 92 bits (226), Expect = 2e-019
Identities = 41/71 (57%), Positives = 63/71 (88%), Gaps = 2/71 (2%)
Frame = +3
Query: 48 DERSSFRLLADSIQKFSDIYEKIEKSKRQQMVELEKMRMDFHRDLEMQKRQIMERAQAEI 227
++ +S+++LADS+++F +YEK+EKSK++QM ELEKMR DF RDLE+QK+QI++RAQ+EI
Sbjct: 239 NDAASYKMLADSVERFGKVYEKMEKSKKEQMKELEKMRADFQRDLELQKKQIVDRAQSEI 298
Query: 228 AKMRQADDEEN 260
A++R ++EEN
Sbjct: 299 ARLR--EEEEN 307
>TAIR9_protein||AT3G58630.1 | Symbols: | transcription factor |
chr3:21683928-21685771 REVERSE
Length = 322
Score = 65 bits (157), Expect = 2e-011
Identities = 29/94 (30%), Positives = 56/94 (59%)
Frame = +3
Query: 3 SDGLPPKKRRFGRDNDERSSFRLLADSIQKFSDIYEKIEKSKRQQMVELEKMRMDFHRDL 182
S G ++ R +++ ++ +AD+I++ IYE++E+ KR++MVELEK RM F ++L
Sbjct: 216 SSGRSGSNKKRERKIEKKQGYKEVADAIERLGQIYERVEEKKRKEMVELEKQRMRFAKEL 275
Query: 183 EMQKRQIMERAQAEIAKMRQADDEENDVSAENAS 284
E + Q+ Q + K+R+ + S+ +A+
Sbjct: 276 ECHRMQLFTEMQVRLHKLRRTSGSKGPTSSASAA 309
>TAIR9_protein||AT3G11100.1 | Symbols: | transcription factor |
chr3:3476490-3477320 REVERSE
Length = 250
Score = 59 bits (142), Expect = 1e-009
Identities = 28/66 (42%), Positives = 44/66 (66%)
Frame = +3
Query: 42 DNDERSSFRLLADSIQKFSDIYEKIEKSKRQQMVELEKMRMDFHRDLEMQKRQIMERAQA 221
D+ E S+FR LA SI K + +E+IE K+Q M+ELEK RM+ ++LE+Q+ ++ Q
Sbjct: 172 DSSEGSAFRELARSILKLGEAFERIEGKKQQMMIELEKQRMEVAKELELQRMNMLMEMQL 231
Query: 222 EIAKMR 239
E+ K +
Sbjct: 232 ELEKSK 237
>TAIR9_protein||AT5G05550.1 | Symbols: | transcription factor |
chr5:1639344-1640550 REVERSE
Length = 247
Score = 57 bits (137), Expect = 5e-009
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = +3
Query: 42 DNDERSSFRLLADSIQKFSDIYEKIEKSKRQQMVELEKMRMDFHRDLEMQKRQIMERAQA 221
D E S+ R LA +I KF ++YE+IE K+Q M+ELEK RM+ +++E+++ ++ Q
Sbjct: 169 DLSEGSTCRELATAILKFGEVYERIEGKKQQMMIELEKQRMEVTKEVELKRMNMLMEMQL 228
Query: 222 EIAKMR 239
EI K +
Sbjct: 229 EIEKSK 234
>TAIR9_protein||AT5G05550.2 | Symbols: | transcription factor |
chr5:1639529-1640550 REVERSE
Length = 250
Score = 57 bits (137), Expect = 5e-009
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = +3
Query: 42 DNDERSSFRLLADSIQKFSDIYEKIEKSKRQQMVELEKMRMDFHRDLEMQKRQIMERAQA 221
D E S+ R LA +I KF ++YE+IE K+Q M+ELEK RM+ +++E+++ ++ Q
Sbjct: 169 DLSEGSTCRELATAILKFGEVYERIEGKKQQMMIELEKQRMEVTKEVELKRMNMLMEMQL 228
Query: 222 EIAKMR 239
EI K +
Sbjct: 229 EIEKSK 234
>TAIR9_protein||AT1G54060.1 | Symbols: ASIL1 | ASIL1 (ARABIDOPSIS 6B-INTERACTING
PROTEIN 1-LIKE 1); sequence-specific DNA binding / transcription factor
| chr1:20180972-20182123 FORWARD
Length = 384
Score = 50 bits (118), Expect = 8e-007
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +3
Query: 18 PKKRRFGRDNDERSSFRLLADSIQKFSDIYEKIEKSKRQQMVELEKMRMDFHRDLEMQKR 197
PK+ + + S +A +I F++ YEK E +K + M ELEK RM F +++E+Q+
Sbjct: 279 PKRLKVDKSGGGGSGVGDVARAILGFTEAYEKAETAKLKLMAELEKERMKFAKEMELQRM 338
Query: 198 QIMERAQAEIAKMRQADDEEN 260
Q + + Q EI + Q ++E +
Sbjct: 339 QFL-KTQLEITQNNQEEEERS 358
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,503,194,471
Number of Sequences: 33410
Number of Extensions: 3503194471
Number of Successful Extensions: 191998780
Number of sequences better than 0.0: 0
|