BLASTX 7.6.2
Query= RU20230 /QuerySize=869
(868 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G17950.1 | Symbols: WUS, PGA6, WUS1 | WUS (WUS... 87 2e-017
TAIR9_protein||AT2G01500.1 | Symbols: PFS2, WOX6, HOS9 | PFS2 (P... 79 4e-015
TAIR9_protein||AT3G11260.1 | Symbols: WOX5 | WOX5 (WUSCHEL RELAT... 78 6e-015
TAIR9_protein||AT2G28610.1 | Symbols: PRS, WOX3, PRS1 | PRS (PRE... 78 7e-015
TAIR9_protein||AT3G18010.1 | Symbols: WOX1 | WOX1 (WUSCHEL relat... 78 7e-015
TAIR9_protein||AT5G59340.1 | Symbols: WOX2 | WOX2 (WUSCHEL RELAT... 77 2e-014
TAIR9_protein||AT5G05770.1 | Symbols: WOX7 | WOX7 (WUSCHEL-RELAT... 75 6e-014
TAIR9_protein||AT1G46480.1 | Symbols: WOX4 | WOX4 (WUSCHEL RELAT... 73 2e-013
TAIR9_protein||AT5G45980.1 | Symbols: WOX8, STPL | WOX8 (WUSCHEL... 68 6e-012
TAIR9_protein||AT2G33880.1 | Symbols: WOX9, HB-3, STIP | HB-3; t... 67 1e-011
TAIR9_protein||AT1G20710.1 | Symbols: WOX10 | WOX10 (WUSCHEL rel... 66 2e-011
TAIR9_protein||AT1G20700.1 | Symbols: WOX14, ATWOX14 | WOX14 (WU... 63 2e-010
TAIR9_protein||AT4G35550.1 | Symbols: HB-4, WOX13, ATWOX13 | WOX... 62 3e-010
TAIR9_protein||AT3G03660.1 | Symbols: WOX11 | WOX11 (WUSCHEL rel... 60 2e-009
TAIR9_protein||AT3G03660.2 | Symbols: WOX11 | WOX11 (WUSCHEL rel... 60 2e-009
TAIR9_protein||AT5G17810.1 | Symbols: WOX12 | WOX12 (WUSCHEL rel... 52 3e-007
>TAIR9_protein||AT2G17950.1 | Symbols: WUS, PGA6, WUS1 | WUS (WUSCHEL); DNA
binding / protein binding / transcription factor/ transcription
regulator | chr2:7809100-7810671 REVERSE
Length = 293
Score = 87 bits (213), Expect = 2e-017
Identities = 38/64 (59%), Positives = 49/64 (76%)
Frame = +1
Query: 400 TNNRWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVFFWFQNLKAR 579
T+ RW PT Q++ILK LYY+ + PT +QIQ+I L+Q+G+IE KNVF+WFQN KAR
Sbjct: 35 TSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKAR 94
Query: 580 ERQK 591
ERQK
Sbjct: 95 ERQK 98
>TAIR9_protein||AT2G01500.1 | Symbols: PFS2, WOX6, HOS9 | PFS2 (PRETTY FEW SEEDS
2); transcription factor | chr2:224470-225997 REVERSE
Length = 272
Score = 79 bits (192), Expect = 4e-015
Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +1
Query: 367 IEDGGNNQAAGTNNRWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKN 546
I++ NN A RW PTP Q+ L+ L Y G + PT EQIQ+I L++YG+IE KN
Sbjct: 47 IDERKNNIPAAATLRWNPTPEQITTLEEL-YRSGTRTPTTEQIQQIASKLRKYGRIEGKN 105
Query: 547 VFFWFQNLKARERQK 591
VF+WFQN KARER K
Sbjct: 106 VFYWFQNHKARERLK 120
>TAIR9_protein||AT3G11260.1 | Symbols: WOX5 | WOX5 (WUSCHEL RELATED HOMEOBOX 5);
transcription factor | chr3:3527606-3528263 FORWARD
Length = 183
Score = 78 bits (191), Expect = 6e-015
Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +1
Query: 376 GGNNQAAGTN-NRWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVF 552
G NN GT RW PT QL+IL L + G + PT +QIQ+I L YG+IE KNVF
Sbjct: 12 GNNNGGTGTKCGRWNPTVEQLKILTDL-FRAGLRTPTTDQIQKISTELSFYGKIESKNVF 70
Query: 553 FWFQNLKARERQKLKE 600
+WFQN KARERQK ++
Sbjct: 71 YWFQNHKARERQKRRK 86
>TAIR9_protein||AT2G28610.1 | Symbols: PRS, WOX3, PRS1 | PRS (PRESSED FLOWER);
transcription factor | chr2:12262115-12263286 FORWARD
Length = 245
Score = 78 bits (190), Expect = 7e-015
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +1
Query: 403 NNRWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVFFWFQNLKARE 582
+ RW PTP QL IL+ + Y G + P QIQ+I HL YG+IE KNVF+WFQN KAR+
Sbjct: 6 STRWCPTPEQLMILEEM-YRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARD 64
Query: 583 RQKLKE 600
RQKL++
Sbjct: 65 RQKLRK 70
>TAIR9_protein||AT3G18010.1 | Symbols: WOX1 | WOX1 (WUSCHEL related homeobox 1);
transcription factor | chr3:6161155-6163183 REVERSE
Length = 351
Score = 78 bits (190), Expect = 7e-015
Identities = 36/63 (57%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Frame = +1
Query: 403 NNRWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVFFWFQNLKARE 582
++RW PTP QLR+L+ L Y +G + P+ + IQ+I L++YG+IE KNVF+WFQN KARE
Sbjct: 74 SSRWNPTPDQLRVLEEL-YRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARE 132
Query: 583 RQK 591
RQK
Sbjct: 133 RQK 135
>TAIR9_protein||AT5G59340.1 | Symbols: WOX2 | WOX2 (WUSCHEL RELATED HOMEOBOX 2);
transcription factor | chr5:23933408-23934627 REVERSE
Length = 261
Score = 77 bits (187), Expect = 2e-014
Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +1
Query: 385 NQAAGTNNRWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVFFWFQ 564
N +++RW PT Q+ +L+ L Y +G + P+ +QIQ+I L+ YG IE KNVF+WFQ
Sbjct: 6 NAGTASSSRWNPTKDQITLLENL-YKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQ 64
Query: 565 NLKARERQKLKEFR 606
N KAR+RQK K+ R
Sbjct: 65 NHKARQRQKQKQER 78
>TAIR9_protein||AT5G05770.1 | Symbols: WOX7 | WOX7 (WUSCHEL-RELATED HOMEOBOX 7);
DNA binding / transcription factor | chr5:1734487-1734855 FORWARD
Length = 123
Score = 75 bits (182), Expect = 6e-014
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Frame = +1
Query: 382 NNQAAGTN---NRWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVF 552
NN GT RW PT Q+++L L + G + P+ +QIQ+I + L YG+IE KNVF
Sbjct: 17 NNGGGGTGAKCGRWNPTVEQVKLLTDL-FKAGLRTPSTDQIQKISMELSFYGKIESKNVF 75
Query: 553 FWFQNLKARERQKLKEFRNV 612
+WFQN KARERQK ++ V
Sbjct: 76 YWFQNHKARERQKCRKISTV 95
>TAIR9_protein||AT1G46480.1 | Symbols: WOX4 | WOX4 (WUSCHEL RELATED HOMEOBOX 4);
transcription factor | chr1:17236903-17237953 REVERSE
Length = 252
Score = 73 bits (177), Expect = 2e-013
Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Frame = +1
Query: 409 RWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVFFWFQNLKARERQ 588
RW PT Q+ IL+ + Y G + P +QI+ I L L +YG+IE KNVF+WFQN KARERQ
Sbjct: 90 RWNPTQEQIGILE-MLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQ 148
Query: 589 KLKEFRNVPVGGSLDLNFGST 651
K K RN + S +F +T
Sbjct: 149 KQK--RNNLISLSCQSSFTTT 167
>TAIR9_protein||AT5G45980.1 | Symbols: WOX8, STPL | WOX8 (WUSCHEL RELATED
HOMEOBOX 8); DNA binding / transcription factor |
chr5:18648921-18650698 FORWARD
Length = 326
Score = 68 bits (165), Expect = 6e-012
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +1
Query: 409 RWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVFFWFQNLKARERQ 588
RW P P Q+RIL+ + ++ G P E+IQ I + L++YGQI D NVF+WFQN K+R +
Sbjct: 55 RWNPKPEQIRILESI-FNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAKH 113
Query: 589 KLKEFRNVP 615
KL+ P
Sbjct: 114 KLRVHHKSP 122
>TAIR9_protein||AT2G33880.1 | Symbols: WOX9, HB-3, STIP | HB-3; transcription
factor | chr2:14341639-14343597 REVERSE
Length = 379
Score = 67 bits (162), Expect = 1e-011
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +1
Query: 409 RWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVFFWFQNLKARERQ 588
RW P P Q+RIL+ + ++ G P E+I+ I L++YGQ+ D NVF+WFQN K+R +
Sbjct: 55 RWNPKPEQIRILEAI-FNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKH 113
Query: 589 KLKEFRN 609
KL+ N
Sbjct: 114 KLRLLHN 120
>TAIR9_protein||AT1G20710.1 | Symbols: WOX10 | WOX10 (WUSCHEL related homeobox
10); DNA binding / transcription factor | chr1:7184485-7185267 FORWARD
Length = 198
Score = 66 bits (160), Expect = 2e-011
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +1
Query: 400 TNNRWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVFFWFQNLKAR 579
T RW PT QL+IL+ + Y +G P P +I+EI + L ++GQI +KNV+ WFQN +AR
Sbjct: 76 TRPRWTPTTTQLQILENI-YKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRRAR 134
Query: 580 ERQK 591
++K
Sbjct: 135 SKRK 138
>TAIR9_protein||AT1G20700.1 | Symbols: WOX14, ATWOX14 | WOX14 (WUSCHEL RELATED
HOMEOBOX 14); DNA binding / transcription factor | chr1:7182558-7183866
FORWARD
Length = 212
Score = 63 bits (152), Expect = 2e-010
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +1
Query: 400 TNNRWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVFFWFQNLKAR 579
T +RW PT QL+IL+ + YD+G P +I+EI L ++GQI + NV+ WFQN +AR
Sbjct: 92 TRHRWTPTSTQLQILESI-YDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRAR 150
Query: 580 ERQK 591
++K
Sbjct: 151 SKRK 154
>TAIR9_protein||AT4G35550.1 | Symbols: HB-4, WOX13, ATWOX13 | WOX13
(WUSCHEL-RELATED HOMEOBOX 13); DNA binding / transcription factor |
chr4:16875814-16877167 REVERSE
Length = 269
Score = 62 bits (150), Expect = 3e-010
Identities = 28/61 (45%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = +1
Query: 409 RWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVFFWFQNLKARERQ 588
RW PTP QL+IL+ + +D+G P+ ++I++I L Q+GQI ++NV+ WFQN +AR ++
Sbjct: 99 RWTPTPVQLQILERI-FDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKR 157
Query: 589 K 591
K
Sbjct: 158 K 158
>TAIR9_protein||AT3G03660.1 | Symbols: WOX11 | WOX11 (WUSCHEL related homeobox
11); DNA binding / transcription factor | chr3:889515-892162 REVERSE
Length = 269
Score = 60 bits (144), Expect = 2e-009
Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Frame = +1
Query: 379 GNNQAAGTNNRWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVFFW 558
G+ A +RW+P P Q+ IL+ +++ G P E+ I L+++G + D NVF+W
Sbjct: 23 GSTSAEPVRSRWSPKPEQILILESIFH-SGMVNPPKEETVRIRKMLEKFGAVGDANVFYW 81
Query: 559 FQNLKARERQKLKEFRNVPVGGSLDLNFGSTSSTDD-----GRSIDLNFGSRVGYG 711
FQN ++R R++ ++ + +T++T D S+ + GS +G+G
Sbjct: 82 FQNRRSRSRRRQRQLQAAAAAAD------ATTNTCDQTMMVSNSLPHHSGSDLGFG 131
>TAIR9_protein||AT3G03660.2 | Symbols: WOX11 | WOX11 (WUSCHEL related homeobox
11); DNA binding / transcription factor | chr3:889515-892162 REVERSE
Length = 298
Score = 60 bits (144), Expect = 2e-009
Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Frame = +1
Query: 379 GNNQAAGTNNRWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQIEDKNVFFW 558
G+ A +RW+P P Q+ IL+ +++ G P E+ I L+++G + D NVF+W
Sbjct: 23 GSTSAEPVRSRWSPKPEQILILESIFH-SGMVNPPKEETVRIRKMLEKFGAVGDANVFYW 81
Query: 559 FQNLKARERQKLKEFRNVPVGGSLDLNFGSTSSTDD-----GRSIDLNFGSRVGYG 711
FQN ++R R++ ++ + +T++T D S+ + GS +G+G
Sbjct: 82 FQNRRSRSRRRQRQLQAAAAAAD------ATTNTCDQTMMVSNSLPHHSGSDLGFG 131
>TAIR9_protein||AT5G17810.1 | Symbols: WOX12 | WOX12 (WUSCHEL related homeobox
12); DNA binding / transcription factor | chr5:5880576-5882602 REVERSE
Length = 269
Score = 52 bits (124), Expect = 3e-007
Identities = 24/82 (29%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Frame = +1
Query: 370 EDGGNNQAAGTNN-----RWAPTPPQLRILKGLYYDKGFKYPTPEQIQEICLHLKQYGQI 534
++G ++ + T+ RW+P P Q+ IL+ + ++ G P ++ I L+++G +
Sbjct: 3 QEGASHSPSSTSTEPVRARWSPKPEQILILESI-FNSGTVNPPKDETVRIRKMLEKFGAV 61
Query: 535 EDKNVFFWFQNLKARERQKLKE 600
D NVF+WFQN ++R R++ ++
Sbjct: 62 GDANVFYWFQNRRSRSRRRHRQ 83
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,503,194,471
Number of Sequences: 33410
Number of Extensions: 3503194471
Number of Successful Extensions: 191998780
Number of sequences better than 0.0: 0
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