BLASTX 7.6.2
Query= RU20245 /QuerySize=994
(993 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G80500.1 | Symbols: | FUNCTIONS IN: molecular... 255 3e-068
>TAIR9_protein||AT1G80500.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: transport, ER to Golgi vesicle-mediated
transport; LOCATED IN: intracellular; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Sedlin (InterPro:IPR006722), Longin-like
(InterPro:IPR011012); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT2G20930.1); Has 437 Blast hits to 435 proteins
in 138 species: Archae - 0; Bacteria - 0; Metazoa - 248; Fungi - 75;
Plants - 53; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). |
chr1:30271195-30272431 FORWARD
Length = 136
Score = 255 bits (651), Expect = 3e-068
Identities = 126/136 (92%), Positives = 130/136 (95%)
Frame = +3
Query: 219 MATTACFIIVSRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMYLKA 398
MA TACFIIV RNDIPIYEAEVGSAAKREDAAQLHQFILHAALD+VQDLAWTTSAM+LK+
Sbjct: 1 MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60
Query: 399 VDRFNDLVVSAYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTLLNPTYLPGSRITS 578
VDRFNDLVVS YVTAGHTRLMLLHDSRN+DGIKSFFQEVHELYIK LLNP YLPGSRITS
Sbjct: 61 VDRFNDLVVSVYVTAGHTRLMLLHDSRNEDGIKSFFQEVHELYIKILLNPLYLPGSRITS 120
Query: 579 SHFDTKVRALARKYL* 626
SHFDTKVRALARKYL*
Sbjct: 121 SHFDTKVRALARKYL* 136
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,503,194,471
Number of Sequences: 33410
Number of Extensions: 3503194471
Number of Successful Extensions: 191998780
Number of sequences better than 0.0: 0
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