BLASTX 7.6.2
Query= RU20394 /QuerySize=246
(245 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G05840.1 | Symbols: PAA2 | PAA2 (20S PROTEASOM... 114 2e-026
TAIR9_protein||AT2G05840.2 | Symbols: PAA2 | PAA2 (20S PROTEASOM... 114 2e-026
TAIR9_protein||AT5G35590.1 | Symbols: PAA1 | PAA1 (PROTEASOME AL... 114 2e-026
TAIR9_protein||AT3G51260.1 | Symbols: PAD1 | PAD1 (20s proteasom... 57 1e-009
TAIR9_protein||AT3G51260.2 | Symbols: PAD1 | PAD1 (20s proteasom... 57 1e-009
TAIR9_protein||AT5G66140.1 | Symbols: PAD2 | PAD2 (PROTEASOME AL... 57 1e-009
TAIR9_protein||AT3G22110.1 | Symbols: PAC1 | PAC1; endopeptidase... 57 3e-009
TAIR9_protein||AT1G53850.1 | Symbols: PAE1, ATPAE1 | PAE1; endop... 56 4e-009
TAIR9_protein||AT1G53850.2 | Symbols: PAE1 | PAE1; endopeptidase... 56 4e-009
TAIR9_protein||AT3G14290.1 | Symbols: PAE2 | PAE2; endopeptidase... 56 4e-009
TAIR9_protein||AT1G47250.1 | Symbols: PAF2 | PAF2; endopeptidase... 45 8e-006
TAIR9_protein||AT5G42790.1 | Symbols: PAF1, ATPSM30 | PAF1; endo... 45 8e-006
>TAIR9_protein||AT2G05840.1 | Symbols: PAA2 | PAA2 (20S PROTEASOME SUBUNIT
PAA2); endopeptidase/ peptidase/ threonine-type endopeptidase |
chr2:2234226-2236053 FORWARD
Length = 247
Score = 114 bits (283), Expect = 2e-026
Identities = 55/57 (96%), Positives = 56/57 (98%)
Frame = +2
Query: 74 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKKVP 244
MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGVRGKDSVCVVTQKKVP
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVP 57
>TAIR9_protein||AT2G05840.2 | Symbols: PAA2 | PAA2 (20S PROTEASOME SUBUNIT
PAA2); endopeptidase/ peptidase/ threonine-type endopeptidase |
chr2:2234226-2235973 FORWARD
Length = 221
Score = 114 bits (283), Expect = 2e-026
Identities = 55/57 (96%), Positives = 56/57 (98%)
Frame = +2
Query: 74 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKKVP 244
MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGVRGKDSVCVVTQKKVP
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVP 57
>TAIR9_protein||AT5G35590.1 | Symbols: PAA1 | PAA1 (PROTEASOME ALPHA SUBUNIT A
1); endopeptidase/ peptidase/ threonine-type endopeptidase |
chr5:13765417-13767768 REVERSE
Length = 247
Score = 114 bits (283), Expect = 2e-026
Identities = 55/57 (96%), Positives = 56/57 (98%)
Frame = +2
Query: 74 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKKVP 244
MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGVRGKDSVCVVTQKKVP
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVP 57
>TAIR9_protein||AT3G51260.1 | Symbols: PAD1 | PAD1 (20s proteasome alpha subunit
pad1); endopeptidase/ peptidase/ threonine-type endopeptidase |
chr3:19031086-19032746 FORWARD
Length = 251
Score = 57 bits (137), Expect = 1e-009
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +2
Query: 98 YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKK 238
YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK
Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTVVLAVEKK 49
>TAIR9_protein||AT3G51260.2 | Symbols: PAD1 | PAD1 (20s proteasome alpha subunit
pad1); endopeptidase/ peptidase/ threonine-type endopeptidase |
chr3:19031086-19032746 FORWARD
Length = 244
Score = 57 bits (137), Expect = 1e-009
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +2
Query: 98 YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKK 238
YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK
Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTVVLAVEKK 49
>TAIR9_protein||AT5G66140.1 | Symbols: PAD2 | PAD2 (PROTEASOME ALPHA SUBUNIT D
2); endopeptidase/ peptidase/ threonine-type endopeptidase |
chr5:26437445-26438677 REVERSE
Length = 251
Score = 57 bits (137), Expect = 1e-009
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +2
Query: 98 YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKK 238
YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D+V + +KK
Sbjct: 4 YDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTVVLAVEKK 49
>TAIR9_protein||AT3G22110.1 | Symbols: PAC1 | PAC1; endopeptidase/ peptidase/
threonine-type endopeptidase | chr3:7792819-7793571 REVERSE
Length = 251
Score = 57 bits (135), Expect = 3e-009
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +2
Query: 98 YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKKV 241
YD TIFSPEGRL+QVEYA +A+ +AG ++IG+ KD V ++ +KKV
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAG-SAIGILSKDGVVLIGEKKV 51
>TAIR9_protein||AT1G53850.1 | Symbols: PAE1, ATPAE1 | PAE1; endopeptidase/
peptidase/ threonine-type endopeptidase | chr1:20104131-20105792
REVERSE
Length = 238
Score = 56 bits (133), Expect = 4e-009
Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +2
Query: 98 YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKKV 241
YDR + FSPEGRLFQVEYA +A+K G T+IGV+ K+ V + +K++
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGVKTKEGVVLAVEKRI 54
>TAIR9_protein||AT1G53850.2 | Symbols: PAE1 | PAE1; endopeptidase/ peptidase/
threonine-type endopeptidase | chr1:20104131-20105792 REVERSE
Length = 238
Score = 56 bits (133), Expect = 4e-009
Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +2
Query: 98 YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKKV 241
YDR + FSPEGRLFQVEYA +A+K G T+IGV+ K+ V + +K++
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGVKTKEGVVLAVEKRI 54
>TAIR9_protein||AT3G14290.1 | Symbols: PAE2 | PAE2; endopeptidase/ peptidase/
threonine-type endopeptidase | chr3:4764364-4766381 FORWARD
Length = 238
Score = 56 bits (133), Expect = 4e-009
Identities = 26/48 (54%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +2
Query: 98 YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKKV 241
YDR + FSPEGRLFQVEYA +A+K G T+IGV+ K+ V + +K++
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGVKTKEGVVLAVEKRI 54
>TAIR9_protein||AT1G47250.1 | Symbols: PAF2 | PAF2; endopeptidase/ peptidase/
threonine-type endopeptidase | chr1:17319220-17320900 FORWARD
Length = 278
Score = 45 bits (105), Expect = 8e-006
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 98 YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKK 238
YD +T +SP GRLFQVEYA +AVK G +IG+R + V + K
Sbjct: 6 YDTDVTTWSPTGRLFQVEYAMEAVKQ-GSAAIGLRSRSHVVLACVNK 51
>TAIR9_protein||AT5G42790.1 | Symbols: PAF1, ATPSM30 | PAF1; endopeptidase/
peptidase/ threonine-type endopeptidase | chr5:17159270-17160975
REVERSE
Length = 279
Score = 45 bits (105), Expect = 8e-006
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 98 YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVRGKDSVCVVTQKK 238
YD +T +SP GRLFQVEYA +AVK G +IG+R + V + K
Sbjct: 6 YDTDVTTWSPTGRLFQVEYAMEAVKQ-GSAAIGLRSRSHVVLACVNK 51
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,532,527,449
Number of Sequences: 33410
Number of Extensions: 3532527449
Number of Successful Extensions: 192026384
Number of sequences better than 0.0: 0
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