BLASTX 7.6.2
Query= RU20432 /QuerySize=970
(969 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G11750.1 | Symbols: CLPP6, NCLPP1, NCLPP6 | CL... 341 5e-094
TAIR9_protein||AT5G45390.1 | Symbols: CLPP4, NCLPP4 | CLPP4 (CLP... 133 2e-031
TAIR9_protein||AT1G02560.1 | Symbols: CLPP5, NCLPP5, NCLPP1 | CL... 133 2e-031
TAIR9_protein||AT1G66670.1 | Symbols: CLPP3, NCLPP3 | CLPP3; ser... 132 5e-031
TAIR9_protein||AT5G23140.1 | Symbols: CLPP2, NCLPP7 | NCLPP7 (NU... 119 3e-027
TAIR9_protein||AT1G12410.1 | Symbols: CLPR2, NCLPP2, CLP2 | CLP2... 106 3e-023
TAIR9_protein||ATCG00670.1 | Symbols: CLPP1, PCLPP | Encodes the... 101 7e-022
TAIR9_protein||AT4G17040.1 | Symbols: | ATP-dependent Clp prote... 69 5e-012
>TAIR9_protein||AT1G11750.1 | Symbols: CLPP6, NCLPP1, NCLPP6 | CLPP6;
serine-type endopeptidase | chr1:3967609-3969535 FORWARD
Length = 272
Score = 341 bits (873), Expect = 5e-094
Identities = 168/242 (69%), Positives = 190/242 (78%), Gaps = 1/242 (0%)
Frame = +3
Query: 114 RKPTRSTVFATLRTPYGDXXXXXXXXXXKLDRKYVGDTSTSYGAIEAKKGNPPVLPAVMT 293
R P R V A L++PYGD + + + +G IEAKKGNPPV+P+VMT
Sbjct: 32 RNPIRRIVSA-LQSPYGDSLKAGLSSNVSGSPIKIDNKAPRFGVIEAKKGNPPVMPSVMT 90
Query: 294 PGGPLDLSSVLFRNRIIFIGQPVNSLVAQRVISQLVTLATIDEEADILVYLNCPGGSTYS 473
PGGPLDLSSVLFRNRIIFIGQP+N+ VAQRVISQLVTLA+ID+++DIL+YLNCPGGSTYS
Sbjct: 91 PGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYS 150
Query: 474 VLAIYDCMSWIKPKVGVVCFXXXXXXXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHV 653
VLAIYDCMSWIKPKVG V F EKGMRYAMPN R+MIHQPQ+GCGGHV
Sbjct: 151 VLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHV 210
Query: 654 EDVRRQVNEAVQTRHKVDKMYVAFTGQSLETVQQYTERDRFLSVSEALEFGLIDGVLETE 833
EDVRRQVNEA++ R K+D+MY AFTGQ LE VQQYTERDRFLS SEALEFGLIDG+LETE
Sbjct: 211 EDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLETE 270
Query: 834 Y* 839
Y*
Sbjct: 271 Y* 272
>TAIR9_protein||AT5G45390.1 | Symbols: CLPP4, NCLPP4 | CLPP4 (CLP PROTEASE P4);
serine-type endopeptidase | chr5:18396351-18397586 FORWARD
Length = 293
Score = 133 bits (334), Expect = 2e-031
Identities = 65/177 (36%), Positives = 98/177 (55%)
Frame = +3
Query: 297 GGPLDLSSVLFRNRIIFIGQPVNSLVAQRVISQLVTLATIDEEADILVYLNCPGGSTYSV 476
G D+ +L R RI+F+G ++ VA ++SQL+ L D + DI +++N PGGS +
Sbjct: 75 GAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSAT 134
Query: 477 LAIYDCMSWIKPKVGVVCFXXXXXXXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVE 656
+AIYD + ++ V + KG R+AMPN RIMIHQP G G
Sbjct: 135 MAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAI 194
Query: 657 DVRRQVNEAVQTRHKVDKMYVAFTGQSLETVQQYTERDRFLSVSEALEFGLIDGVLE 827
DV Q E + ++ V + T +S E V + +RDR++S EA+E+GLIDGV++
Sbjct: 195 DVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVID 251
>TAIR9_protein||AT1G02560.1 | Symbols: CLPP5, NCLPP5, NCLPP1 | CLPP5 (NUCLEAR
ENCODED CLP PROTEASE 5); serine-type endopeptidase | chr1:538000-539805
FORWARD
Length = 299
Score = 133 bits (333), Expect = 2e-031
Identities = 75/200 (37%), Positives = 109/200 (54%), Gaps = 5/200 (2%)
Frame = +3
Query: 225 TSTSYGAIEAKKGNPPVLPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSLVAQRVISQLVT 404
+S + A +G PP++ + S LF+ RII G V+ +A +++QL+
Sbjct: 91 SSPYFPAYAQGQGPPPMVQERFQ-----SIISQLFQYRIIRCGGAVDDDMANIIVAQLLY 145
Query: 405 LATIDEEADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGVVCFXXXXXXXXXXXXXXEKG 584
L +D DI++Y+N PGGS + +AI+D M I+P V VC KG
Sbjct: 146 LDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKG 205
Query: 585 MRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQTRHKVDKMYVAFTGQSLETVQQYTE 764
RY++PN+RIMIHQP G G D+ Q NE + + ++ TGQSLE + Q T+
Sbjct: 206 KRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTD 265
Query: 765 RDRFLSVSEALEFGLIDGVL 824
RD F+S EA E+GLIDGV+
Sbjct: 266 RDFFMSAKEAKEYGLIDGVI 285
>TAIR9_protein||AT1G66670.1 | Symbols: CLPP3, NCLPP3 | CLPP3; serine-type
endopeptidase | chr1:24863995-24865646 REVERSE
Length = 310
Score = 132 bits (330), Expect = 5e-031
Identities = 65/174 (37%), Positives = 99/174 (56%)
Frame = +3
Query: 306 LDLSSVLFRNRIIFIGQPVNSLVAQRVISQLVTLATIDEEADILVYLNCPGGSTYSVLAI 485
LD +++L R RI+F+G V+ + A VISQL+ L D E DI +++N PGGS + + I
Sbjct: 84 LDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGI 143
Query: 486 YDCMSWIKPKVGVVCFXXXXXXXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVR 665
YD M K V VC KG RY MPN+++MIHQP GG ++
Sbjct: 144 YDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMS 203
Query: 666 RQVNEAVQTRHKVDKMYVAFTGQSLETVQQYTERDRFLSVSEALEFGLIDGVLE 827
++ E + + K++K++ TG+ ++ T+RD FL+ EA E+GLID V++
Sbjct: 204 IRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVID 257
>TAIR9_protein||AT5G23140.1 | Symbols: CLPP2, NCLPP7 | NCLPP7 (NUCLEAR-ENCODED
CLP PROTEASE P7); serine-type endopeptidase | chr5:7783811-7784826
FORWARD
Length = 242
Score = 119 bits (298), Expect = 3e-027
Identities = 60/173 (34%), Positives = 93/173 (53%)
Frame = +3
Query: 309 DLSSVLFRNRIIFIGQPVNSLVAQRVISQLVTLATIDEEADILVYLNCPGGSTYSVLAIY 488
D+ S L + RII I P+N + V++QL+ L + + I +YLN PGG + LAIY
Sbjct: 48 DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIY 107
Query: 489 DCMSWIKPKVGVVCFXXXXXXXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVRR 668
D M +I+ + +C KG R ++PNA +MIHQP G G +D+
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITI 167
Query: 669 QVNEAVQTRHKVDKMYVAFTGQSLETVQQYTERDRFLSVSEALEFGLIDGVLE 827
+ V+ ++++YV TGQ L+ V +RD F++ EA FG+ID V++
Sbjct: 168 HTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVID 220
>TAIR9_protein||AT1G12410.1 | Symbols: CLPR2, NCLPP2, CLP2 | CLP2 (CLP PROTEASE
PROTEOLYTIC SUBUNIT 2); serine-type endopeptidase |
chr1:4223099-4224954 FORWARD
Length = 280
Score = 106 bits (263), Expect = 3e-023
Identities = 56/173 (32%), Positives = 90/173 (52%)
Frame = +3
Query: 306 LDLSSVLFRNRIIFIGQPVNSLVAQRVISQLVTLATIDEEADILVYLNCPGGSTYSVLAI 485
+D+ + L+R R+IFIGQ ++ + ++++ ++ L T+D+ I +YLN PGG LAI
Sbjct: 88 VDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAI 147
Query: 486 YDCMSWIKPKVGVVCFXXXXXXXXXXXXXXEKGMRYAMPNARIMIHQPQSGCGGHVEDVR 665
YD M +K VG C EKG R+AMP +RI + P G +D++
Sbjct: 148 YDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQ 207
Query: 666 RQVNEAVQTRHKVDKMYVAFTGQSLETVQQYTERDRFLSVSEALEFGLIDGVL 824
+ E + R + TGQ E V + R + + EA+E+GLID ++
Sbjct: 208 NEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIV 260
>TAIR9_protein||ATCG00670.1 | Symbols: CLPP1, PCLPP | Encodes the only ClpP
(caseinolytic protease) encoded within the plastid genome. Contains a
highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp).
Part of the 350 kDa chloroplast Clp complex. The name reflects
nomenclature described in Adam et. al (2001). | chrC:69910-71882
REVERSE
Length = 197
Score = 101 bits (251), Expect = 7e-022
Identities = 51/171 (29%), Positives = 93/171 (54%), Gaps = 1/171 (0%)
Frame = +3
Query: 306 LDLSSVLFRNRIIFIGQPVNSLVAQRVISQLVTLATIDEEADILVYLNCPGGSTYSVLAI 485
+D+ + L+R R+ F+GQ V++ ++ ++IS ++ L+ + D+ +++N PGG S +AI
Sbjct: 21 VDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAI 80
Query: 486 YDCMSWIKPKVGVVCFXXXXXXXXXXXXXXEKGMRYAMPNARIMIHQPQSG-CGGHVEDV 662
YD M +++P V +C R A P+AR+MIHQP S +
Sbjct: 81 YDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEF 140
Query: 663 RRQVNEAVQTRHKVDKMYVAFTGQSLETVQQYTERDRFLSVSEALEFGLID 815
+ E ++ R + ++YV TG+ + + + ERD F+S +EA G++D
Sbjct: 141 ILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMSATEAQAHGIVD 191
>TAIR9_protein||AT4G17040.1 | Symbols: | ATP-dependent Clp protease proteolytic
subunit, putative | chr4:9586740-9589297 REVERSE
Length = 306
Score = 69 bits (166), Expect = 5e-012
Identities = 38/125 (30%), Positives = 61/125 (48%)
Frame = +3
Query: 459 GSTYSVLAIYDCMSWIKPKVGVVCFXXXXXXXXXXXXXXEKGMRYAMPNARIMIHQPQSG 638
G AIYD M ++KP + +C KG R A+P++ IMI QP +
Sbjct: 163 GYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIAR 222
Query: 639 CGGHVEDVRRQVNEAVQTRHKVDKMYVAFTGQSLETVQQYTERDRFLSVSEALEFGLIDG 818
G DV E + ++ K+Y G+S E ++ +R ++ S +EA+E+G+ID
Sbjct: 223 FQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDK 282
Query: 819 VLETE 833
V+ E
Sbjct: 283 VVYNE 287
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,532,527,449
Number of Sequences: 33410
Number of Extensions: 3532527449
Number of Successful Extensions: 192026384
Number of sequences better than 0.0: 0
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