BLASTX 7.6.2
Query= RU20461 /QuerySize=818
(817 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (... 112 2e-025
TAIR9_protein||AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO... 80 1e-015
TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 77 9e-015
TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulat... 77 9e-015
TAIR9_protein||AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 77 9e-015
TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABI... 74 1e-013
TAIR9_protein||AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABI... 73 2e-013
TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-... 55 6e-008
TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type... 54 8e-008
TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type... 54 8e-008
TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST I... 54 8e-008
TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast... 54 8e-008
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 54 1e-007
TAIR9_protein||AT1G07050.1 | Symbols: | CONSTANS-like protein-r... 53 2e-007
TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type... 53 2e-007
TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type... 52 3e-007
TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type... 52 4e-007
TAIR9_protein||AT1G51600.1 | Symbols: ZML2, TIFY2A | TIFY2A; seq... 50 2e-006
TAIR9_protein||AT1G51600.2 | Symbols: ZML2, TIFY2A | TIFY2A; seq... 50 2e-006
TAIR9_protein||AT2G33350.1 | Symbols: | FUNCTIONS IN: molecular... 49 3e-006
TAIR9_protein||AT2G33350.2 | Symbols: | FUNCTIONS IN: molecular... 49 3e-006
TAIR9_protein||AT1G04500.1 | Symbols: | zinc finger CONSTANS-re... 49 3e-006
TAIR9_protein||AT1G63820.1 | Symbols: | INVOLVED IN: biological... 48 6e-006
TAIR9_protein||AT3G12890.1 | Symbols: ASML2 | ASML2 (ACTIVATOR O... 47 1e-005
>TAIR9_protein||AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB
EXPRESSION 1); transcription regulator/ two-component response
regulator | chr5:24675540-24678176 FORWARD
Length = 619
Score = 112 bits (280), Expect = 2e-025
Identities = 52/65 (80%), Positives = 62/65 (95%)
Frame = -1
Query: 817 VKLSKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVDVDLN 638
V+++K+DRRE AL+KFR+KR +RCFDKKIRYVNRKRLAERRPRV+GQFVRK+NGV+VDLN
Sbjct: 525 VRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLN 584
Query: 637 GQPAS 623
GQP S
Sbjct: 585 GQPDS 589
>TAIR9_protein||AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE
REGULATOR 7); transcription regulator/ two-component response regulator
| chr5:638283-641461 REVERSE
Length = 728
Score = 80 bits (197), Expect = 1e-015
Identities = 37/48 (77%), Positives = 44/48 (91%)
Frame = -1
Query: 808 SKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 665
+K+ +REAAL KFRQKRKERCF KK+RY +RK+LAE+RPRVRGQFVRK
Sbjct: 664 NKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRK 711
>TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19233422-19234901
FORWARD
Length = 352
Score = 77 bits (189), Expect = 9e-015
Identities = 35/46 (76%), Positives = 43/46 (93%)
Frame = -1
Query: 796 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 659
+REAAL+KFR KRK+RCFDKK+RY +RK+LAE+RPRV+GQFVR VN
Sbjct: 299 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVN 344
>TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulator, putative /
timing of CAB expression 1-like protein, putative |
chr2:19164589-19165233 REVERSE
Length = 184
Score = 77 bits (189), Expect = 9e-015
Identities = 35/46 (76%), Positives = 43/46 (93%)
Frame = -1
Query: 796 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 659
+REAAL+KFR KRK+RCFDKK+RY +RK+LAE+RPRV+GQFVR VN
Sbjct: 131 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVN 176
>TAIR9_protein||AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19232874-19234901
FORWARD
Length = 469
Score = 77 bits (189), Expect = 9e-015
Identities = 35/46 (76%), Positives = 43/46 (93%)
Frame = -1
Query: 796 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 659
+REAAL+KFR KRK+RCFDKK+RY +RK+LAE+RPRV+GQFVR VN
Sbjct: 416 QREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVRTVN 461
>TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component
response regulator | chr5:8356204-8358873 REVERSE
Length = 668
Score = 74 bits (179), Expect = 1e-013
Identities = 32/51 (62%), Positives = 45/51 (88%)
Frame = -1
Query: 814 KLSKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKV 662
K+ + +REAAL KFR KRK+RC++KK+RY +RK+LAE+RPR++GQFVR+V
Sbjct: 611 KIQQSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQV 661
>TAIR9_protein||AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 3); transcription regulator/ two-component
response regulator | chr5:24198215-24200502 REVERSE
Length = 496
Score = 73 bits (177), Expect = 2e-013
Identities = 32/44 (72%), Positives = 41/44 (93%)
Frame = -1
Query: 796 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 665
+REAAL+KFR KRKERCF+KK+RY +RK+LAE+RP V+GQF+RK
Sbjct: 441 QREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-13193543
REVERSE
Length = 395
Score = 55 bits (130), Expect = 6e-008
Identities = 23/45 (51%), Positives = 37/45 (82%)
Frame = -1
Query: 793 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 659
REA+++++++KR+ R F KKIRY RK A++RPR++G+FVR+ N
Sbjct: 341 REASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFVRRPN 385
>TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175936 REVERSE
Length = 327
Score = 54 bits (129), Expect = 8e-008
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = -1
Query: 793 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVD 650
REA + ++R KRK R F+KKIRY RK A++RPR++G+FVR+ +D
Sbjct: 278 REARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRSLAID 325
>TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175811 REVERSE
Length = 320
Score = 54 bits (129), Expect = 8e-008
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = -1
Query: 793 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVD 650
REA + ++R KRK R F+KKIRY RK A++RPR++G+FVR+ +D
Sbjct: 271 REARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRSLAID 318
>TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170763 FORWARD
Length = 436
Score = 54 bits (129), Expect = 8e-008
Identities = 23/45 (51%), Positives = 37/45 (82%)
Frame = -1
Query: 793 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 659
REA+++++++KR+ R F KKIRY RK A++RPR++G+FVR+ N
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRRPN 427
>TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis
thaliana protein match is: CIL (TAIR:AT4G25990.1); Has 1815 Blast hits
to 1506 proteins in 139 species: Archae - 0; Bacteria - 8; Metazoa -
291; Fungi - 53; Plants - 1145; Viruses - 0; Other Eukaryotes - 318
(source: NCBI BLink). | chr5:4632147-4633651 REVERSE
Length = 340
Score = 54 bits (129), Expect = 8e-008
Identities = 23/43 (53%), Positives = 36/43 (83%)
Frame = -1
Query: 793 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 665
REA+L+++++KR+ R F K+IRY RK AE+RPRV+G+FV++
Sbjct: 294 REASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKR 336
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 54 bits (128), Expect = 1e-007
Identities = 26/50 (52%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = -1
Query: 814 KLSKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 665
+LS +D REA ++++R+KRK R F+K IRY +RK AE RPRV G+F ++
Sbjct: 300 QLSPMD-REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348
>TAIR9_protein||AT1G07050.1 | Symbols: | CONSTANS-like protein-related |
chr1:2164327-2165133 REVERSE
Length = 196
Score = 53 bits (126), Expect = 2e-007
Identities = 22/44 (50%), Positives = 36/44 (81%)
Frame = -1
Query: 796 RREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 665
RREA+++++++KR+ R F KKIRY RK A++RPR +G+FV++
Sbjct: 150 RREASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193
>TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:27779214-27780522 FORWARD
Length = 393
Score = 53 bits (126), Expect = 2e-007
Identities = 22/45 (48%), Positives = 36/45 (80%)
Frame = -1
Query: 793 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 659
REA ++++++KR+ R F KKIRY RK AE+RPR++G+FV++ +
Sbjct: 345 REARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTS 389
>TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:8933939-8935284 REVERSE
Length = 418
Score = 52 bits (124), Expect = 3e-007
Identities = 23/45 (51%), Positives = 35/45 (77%)
Frame = -1
Query: 793 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVN 659
REA + ++R+KR+ R F KKIRY RK AE+RPR++G+FV++ +
Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRAS 405
>TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:25709331-25710749 REVERSE
Length = 407
Score = 52 bits (123), Expect = 4e-007
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = -1
Query: 793 REAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRK 665
REA + ++R+KR+ R F KKIRY RK AE+RPR++G+FV++
Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 399
>TAIR9_protein||AT1G51600.1 | Symbols: ZML2, TIFY2A | TIFY2A; sequence-specific
DNA binding / transcription factor/ zinc ion binding |
chr1:19133176-19135252 FORWARD
Length = 303
Score = 50 bits (118), Expect = 2e-006
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = -1
Query: 802 VDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQF 674
+ +R A+L++FR+KRK R FDKKIRY RK +A R R +GQF
Sbjct: 144 IPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQF 186
>TAIR9_protein||AT1G51600.2 | Symbols: ZML2, TIFY2A | TIFY2A; sequence-specific
DNA binding / transcription factor/ zinc ion binding |
chr1:19133176-19135252 FORWARD
Length = 303
Score = 50 bits (118), Expect = 2e-006
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = -1
Query: 802 VDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQF 674
+ +R A+L++FR+KRK R FDKKIRY RK +A R R +GQF
Sbjct: 144 IPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQF 186
>TAIR9_protein||AT2G33350.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: zinc finger CONSTANS-related
(TAIR:AT1G04500.1); Has 7691 Blast hits to 4729 proteins in 129
species: Archae - 8; Bacteria - 25; Metazoa - 148; Fungi - 114; Plants
- 918; Viruses - 0; Other Eukaryotes - 6478 (source: NCBI BLink). |
chr2:14134116-14136836 FORWARD
Length = 411
Score = 49 bits (116), Expect = 3e-006
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 814 KLSKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 668
KLS R+E + ++ +KR ER F+KKI+Y RK LA+ RPRVRG+F +
Sbjct: 305 KLSPEQRKE-KIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK 352
>TAIR9_protein||AT2G33350.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: zinc finger CONSTANS-related
(TAIR:AT1G04500.1); Has 7688 Blast hits to 4734 proteins in 129
species: Archae - 8; Bacteria - 25; Metazoa - 148; Fungi - 118; Plants
- 919; Viruses - 0; Other Eukaryotes - 6470 (source: NCBI BLink). |
chr2:14134116-14136836 FORWARD
Length = 410
Score = 49 bits (116), Expect = 3e-006
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = -1
Query: 814 KLSKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 668
KLS R+E + ++ +KR ER F+KKI+Y RK LA+ RPRVRG+F +
Sbjct: 304 KLSPEQRKE-KIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK 351
>TAIR9_protein||AT1G04500.1 | Symbols: | zinc finger CONSTANS-related |
chr1:1221757-1224235 REVERSE
Length = 387
Score = 49 bits (115), Expect = 3e-006
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = -1
Query: 814 KLSKVDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 668
KLS R+E + ++ +KR ER F KKI+Y RK LA+ RPRVRG+F +
Sbjct: 282 KLSAEQRKE-KIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 329
>TAIR9_protein||AT1G63820.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower,
root; EXPRESSED DURING: petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G41380.1); Has 907 Blast hits to 907 proteins in 64 species:
Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 882; Viruses
- 0; Other Eukaryotes - 24 (source: NCBI BLink). |
chr1:23682529-23684050 REVERSE
Length = 294
Score = 48 bits (113), Expect = 6e-006
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = -1
Query: 799 DRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 668
+ R+ + K+R KR +R F K I+Y RK LA+ RPRVRG+F R
Sbjct: 190 EERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFAR 233
>TAIR9_protein||AT3G12890.1 | Symbols: ASML2 | ASML2 (ACTIVATOR OF
SPOMIN::LUC2); transcription activator | chr3:4099223-4100277 FORWARD
Length = 252
Score = 47 bits (111), Expect = 1e-005
Identities = 21/45 (46%), Positives = 34/45 (75%)
Frame = -1
Query: 802 VDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVR 668
V+ R+ ++++ +K+ +R F+K I+YV RK LA+RR RVRG+F R
Sbjct: 136 VEERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRFAR 180
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,532,527,449
Number of Sequences: 33410
Number of Extensions: 3532527449
Number of Successful Extensions: 192026384
Number of sequences better than 0.0: 0
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