BLASTX 7.6.2
Query= RU20586 /QuerySize=235
(234 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G46950.1 | Symbols: | mitochondrial transcrip... 54 2e-008
TAIR9_protein||AT1G62490.1 | Symbols: | mitochondrial transcrip... 52 5e-008
TAIR9_protein||AT1G61960.1 | Symbols: | mitochondrial transcrip... 52 6e-008
TAIR9_protein||AT5G23930.1 | Symbols: | mitochondrial transcrip... 51 1e-007
TAIR9_protein||AT1G62010.1 | Symbols: | mitochondrial transcrip... 50 3e-007
TAIR9_protein||AT1G62150.1 | Symbols: | mitochondrial transcrip... 48 9e-007
TAIR9_protein||AT1G62110.1 | Symbols: | mitochondrial transcrip... 47 2e-006
TAIR9_protein||AT1G61970.1 | Symbols: | mitochondrial transcrip... 47 2e-006
TAIR9_protein||AT1G61990.1 | Symbols: | mitochondrial transcrip... 47 2e-006
TAIR9_protein||AT1G61980.1 | Symbols: | mitochondrial transcrip... 47 3e-006
TAIR9_protein||AT1G62085.1 | Symbols: | mitochondrial transcrip... 46 3e-006
TAIR9_protein||AT1G21150.1 | Symbols: | mitochondrial transcrip... 46 4e-006
>TAIR9_protein||AT3G46950.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr3:17289452-17290804
FORWARD
Length = 451
Score = 54 bits (128), Expect = 2e-008
Identities = 24/67 (35%), Positives = 44/67 (65%)
Frame = +1
Query: 7 NVEKVISMGFDPSSTTFMKALYVVSVTNAAKRKHKMEFYEKWGWTEDDVLLAFRKNPMFM 186
+++KV+ MGFDP+ + F++AL+VV + + K+ Y++ G++E ++ F+K P F+
Sbjct: 222 SLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFL 281
Query: 187 SFSVKNI 207
FS K I
Sbjct: 282 KFSEKKI 288
>TAIR9_protein||AT1G62490.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr1:23130405-23131533
REVERSE
Length = 335
Score = 52 bits (124), Expect = 5e-008
Identities = 25/75 (33%), Positives = 46/75 (61%)
Frame = +1
Query: 4 TNVEKVISMGFDPSSTTFMKALYVVSVTNAAKRKHKMEFYEKWGWTEDDVLLAFRKNPMF 183
T+++KV+ MGFDP++ F+KAL+V N + K+ Y+ G+ +DV + F+K P
Sbjct: 231 TSLKKVVEMGFDPTTAKFVKALHVSYEMNDKTIEEKVNVYKMLGFAVEDVWVIFKKWPYS 290
Query: 184 MSFSVKNISAKMDFL 228
+ +S + I+ ++ L
Sbjct: 291 LKYSEEKITQTIETL 305
>TAIR9_protein||AT1G61960.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr1:22902239-22903612
FORWARD
Length = 458
Score = 52 bits (123), Expect = 6e-008
Identities = 26/74 (35%), Positives = 45/74 (60%)
Frame = +1
Query: 7 NVEKVISMGFDPSSTTFMKALYVVSVTNAAKRKHKMEFYEKWGWTEDDVLLAFRKNPMFM 186
+++KV+ MGFDP +T F++AL V+ + + K+ Y++ G+ DV F+K P F+
Sbjct: 227 SLKKVVEMGFDPETTKFVEALRVIYRMSDKTIEEKVNVYKRLGFGVADVWAIFKKWPSFL 286
Query: 187 SFSVKNISAKMDFL 228
S+S K I+ + L
Sbjct: 287 SYSEKKITHTFETL 300
>TAIR9_protein||AT5G23930.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr5:8074625-8075998
REVERSE
Length = 458
Score = 51 bits (121), Expect = 1e-007
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +1
Query: 7 NVEKVISMGFDPSSTTFMKALYVVSVTNAAKRKHKMEFYEKWGWTEDDVLLAFRKNPMFM 186
+V+K++ MGFDP S F+ ALYV + + K+ Y + G + ++V F+K P +
Sbjct: 224 SVKKIVEMGFDPKSPKFVNALYVFYELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSL 283
Query: 187 SFSVKNISAKMDFL 228
+S KNI K + L
Sbjct: 284 KYSEKNIIQKFETL 297
>TAIR9_protein||AT1G62010.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr1:22915886-22917133
FORWARD
Length = 416
Score = 50 bits (117), Expect = 3e-007
Identities = 23/75 (30%), Positives = 46/75 (61%)
Frame = +1
Query: 7 NVEKVISMGFDPSSTTFMKALYVVSVTNAAKRKHKMEFYEKWGWTEDDVLLAFRKNPMFM 186
+++KV+ MGFDP+++TF+ AL+++ + + K+ Y G++ DDV F+K P +
Sbjct: 210 SLKKVVEMGFDPTTSTFVHALHMLYQMSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPRSL 269
Query: 187 SFSVKNISAKMDFLL 231
+ S K ++ ++ L
Sbjct: 270 THSEKKVANSIETFL 284
>TAIR9_protein||AT1G62150.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr1:22970198-22971589
REVERSE
Length = 464
Score = 48 bits (113), Expect = 9e-007
Identities = 22/67 (32%), Positives = 40/67 (59%)
Frame = +1
Query: 7 NVEKVISMGFDPSSTTFMKALYVVSVTNAAKRKHKMEFYEKWGWTEDDVLLAFRKNPMFM 186
++ KV+ MGFDP++ F++AL +V + + + Y+++G T +DV F+K P F+
Sbjct: 234 SLNKVVGMGFDPTTPKFVEALCIVYGLSDKRLEENFNVYKRFGLTVNDVWELFKKCPAFL 293
Query: 187 SFSVKNI 207
+S I
Sbjct: 294 GYSENRI 300
>TAIR9_protein||AT1G62110.1 | Symbols: | mitochondrial transcription
termination factor family protein / mTERF family protein |
chr1:22958094-22959482 REVERSE
Length = 463
Score = 47 bits (111), Expect = 2e-006
Identities = 23/74 (31%), Positives = 44/74 (59%)
Frame = +1
Query: 7 NVEKVISMGFDPSSTTFMKALYVVSVTNAAKRKHKMEFYEKWGWTEDDVLLAFRKNPMFM 186
+++KV+ MGFDP+++ F++AL V + ++ Y+ +G+ +DV F+K P F+
Sbjct: 228 SLKKVVEMGFDPTTSKFVQALRAVYRFTDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFL 287
Query: 187 SFSVKNISAKMDFL 228
+ S K I ++ L
Sbjct: 288 NSSEKKIGQTIETL 301
>TAIR9_protein||AT1G61970.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr1:22904713-22905969
FORWARD
Length = 419
Score = 47 bits (110), Expect = 2e-006
Identities = 23/74 (31%), Positives = 43/74 (58%)
Frame = +1
Query: 10 VEKVISMGFDPSSTTFMKALYVVSVTNAAKRKHKMEFYEKWGWTEDDVLLAFRKNPMFMS 189
++KV+ MGFDP+++ F++AL V+ N + K+ Y+ G+ DV +F+K P+ +
Sbjct: 227 LKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLR 286
Query: 190 FSVKNISAKMDFLL 231
S K + ++ L
Sbjct: 287 VSEKKMLDSIETFL 300
>TAIR9_protein||AT1G61990.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr1:22911453-22912697
FORWARD
Length = 415
Score = 47 bits (110), Expect = 2e-006
Identities = 24/76 (31%), Positives = 42/76 (55%)
Frame = +1
Query: 7 NVEKVISMGFDPSSTTFMKALYVVSVTNAAKRKHKMEFYEKWGWTEDDVLLAFRKNPMFM 186
+++KV+ MGFDP++T F+ AL ++ + + K+ + G+T DDV F+K P +
Sbjct: 219 SLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVL 278
Query: 187 SFSVKNISAKMDFLLN 234
S K I + L+
Sbjct: 279 KVSKKKILKSAETFLD 294
>TAIR9_protein||AT1G61980.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr1:22908162-22909418
FORWARD
Length = 419
Score = 47 bits (109), Expect = 3e-006
Identities = 23/67 (34%), Positives = 42/67 (62%)
Frame = +1
Query: 7 NVEKVISMGFDPSSTTFMKALYVVSVTNAAKRKHKMEFYEKWGWTEDDVLLAFRKNPMFM 186
+++KV+ MGFDPS++ F++AL VV + + K+ Y++ G+ + V F++ P F+
Sbjct: 226 SLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFL 285
Query: 187 SFSVKNI 207
+ S K I
Sbjct: 286 THSEKKI 292
>TAIR9_protein||AT1G62085.1 | Symbols: | mitochondrial transcription
termination factor family protein / mTERF family protein |
chr1:22948757-22950142 REVERSE
Length = 462
Score = 46 bits (108), Expect = 3e-006
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +1
Query: 7 NVEKVISMGFDPSSTTFMKALYVVSVTNAAKRKHKMEFYEKWGWTEDDVLLAFRKNPMFM 186
+++KV+ MGFDP+++ F+KAL VV + K+ + G++ DV F+K P F+
Sbjct: 231 SLKKVVEMGFDPTTSKFVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFL 290
Query: 187 SFSVKNI 207
+FS I
Sbjct: 291 NFSENKI 297
>TAIR9_protein||AT1G21150.1 | Symbols: | mitochondrial transcription
termination factor family protein / mTERF family protein |
chr1:7406406-7407578 REVERSE
Length = 391
Score = 46 bits (107), Expect = 4e-006
Identities = 19/75 (25%), Positives = 42/75 (56%)
Frame = +1
Query: 10 VEKVISMGFDPSSTTFMKALYVVSVTNAAKRKHKMEFYEKWGWTEDDVLLAFRKNPMFMS 189
+ +V S GFDP F+ A+ T+ + + K + ++ +GW+++D + A + P ++
Sbjct: 235 LNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVT 294
Query: 190 FSVKNISAKMDFLLN 234
S + I +++L+N
Sbjct: 295 VSDEKIMYTLEYLVN 309
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,590,698,424
Number of Sequences: 33410
Number of Extensions: 3590698424
Number of Successful Extensions: 197135522
Number of sequences better than 0.0: 0
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