BLASTX 7.6.2
Query= RU20819 /QuerySize=746
(745 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G19480.1 | Symbols: | D-3-phosphoglycerate de... 209 2e-054
TAIR9_protein||AT4G34200.1 | Symbols: EDA9 | EDA9 (embryo sac de... 205 2e-053
TAIR9_protein||AT1G17745.1 | Symbols: PGDH | PGDH (3-PHOSPHOGLYC... 204 5e-053
TAIR9_protein||AT1G17744.1 | Symbols: | unknown protein | chr1:... 90 1e-018
>TAIR9_protein||AT3G19480.1 | Symbols: | D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative | chr3:6752590-6754650 FORWARD
Length = 589
Score = 209 bits (530), Expect = 2e-054
Identities = 108/181 (59%), Positives = 136/181 (75%), Gaps = 4/181 (2%)
Frame = +2
Query: 215 NHSTLSLAVTNALNTVQSSSPVSTSGDRTKLPSSNA----KPTILVSEKLGEAGLEVLRK 382
N S++ + + + T S P+ + SS++ KPTILV+EKLG+AG+++L+K
Sbjct: 6 NLSSIFSSSSRLVTTPSSVFPIRQRRRIILVTSSSSGGGGKPTILVTEKLGQAGIDLLKK 65
Query: 383 FGNLECAYNLTPEELCSKISACDALIVRSGTKVNRQVFEASKGRLKVVGRAGVGIDNVDL 562
+ N++C+Y+L+ EELC+KIS CDALIVRSGTKV R VFE+S+GRLKVVGRAGVGIDNVDL
Sbjct: 66 YANVDCSYDLSLEELCTKISLCDALIVRSGTKVGRDVFESSRGRLKVVGRAGVGIDNVDL 125
Query: 563 QAATEFGCLXXXXXXXXXXXXXEHGIALLTSMARNVAQADASMKAGLWKRNKYVGVSLVG 742
AATE+GCL EHGIALLT+MARN+AQADAS+KAG W RNKYVGVSLVG
Sbjct: 126 AAATEYGCLVVNAPTANTVAAAEHGIALLTAMARNIAQADASIKAGKWTRNKYVGVSLVG 185
Query: 743 K 745
K
Sbjct: 186 K 186
>TAIR9_protein||AT4G34200.1 | Symbols: EDA9 | EDA9 (embryo sac development
arrest 9); ATP binding | chr4:16374041-16376561 REVERSE
Length = 604
Score = 205 bits (521), Expect = 2e-053
Identities = 102/142 (71%), Positives = 117/142 (82%)
Frame = +2
Query: 320 AKPTILVSEKLGEAGLEVLRKFGNLECAYNLTPEELCSKISACDALIVRSGTKVNRQVFE 499
+KPTILV+EKLG+AG+++L N++C+YN+TPEEL KIS CDALIVRSGTKV R+VFE
Sbjct: 60 SKPTILVAEKLGDAGIKLLEDVANVDCSYNMTPEELNIKISLCDALIVRSGTKVGREVFE 119
Query: 500 ASKGRLKVVGRAGVGIDNVDLQAATEFGCLXXXXXXXXXXXXXEHGIALLTSMARNVAQA 679
+S GRLKVVGRAGVGIDNVDL AATEFGCL EHGIAL+ +MARNVAQA
Sbjct: 120 SSHGRLKVVGRAGVGIDNVDLSAATEFGCLVVNAPTANTIAAAEHGIALMAAMARNVAQA 179
Query: 680 DASMKAGLWKRNKYVGVSLVGK 745
DAS+KAG WKRNKYVGVSLVGK
Sbjct: 180 DASVKAGEWKRNKYVGVSLVGK 201
>TAIR9_protein||AT1G17745.1 | Symbols: PGDH | PGDH (3-PHOSPHOGLYCERATE
DEHYDROGENASE); phosphoglycerate dehydrogenase | chr1:6101157-6104979
FORWARD
Length = 625
Score = 204 bits (518), Expect = 5e-053
Identities = 112/187 (59%), Positives = 137/187 (73%), Gaps = 6/187 (3%)
Frame = +2
Query: 203 HIRGNHSTLSLAVTNALNTVQSS-----SPVSTSG-DRTKLPSSNAKPTILVSEKLGEAG 364
H R S A++ AL TV+ + + ST G D + + KP ILV+EKLGEAG
Sbjct: 36 HRRYATSVKLTAISAALKTVEQTTLTEDNRFSTVGSDSDEYNPTLPKPRILVTEKLGEAG 95
Query: 365 LEVLRKFGNLECAYNLTPEELCSKISACDALIVRSGTKVNRQVFEASKGRLKVVGRAGVG 544
+ +LR+FG+++C+Y+L+PE+L K++ DALIVRSGTKV R+VFEA+KGRLKVVGRAGVG
Sbjct: 96 VNLLREFGDVDCSYDLSPEDLKKKVAESDALIVRSGTKVTREVFEAAKGRLKVVGRAGVG 155
Query: 545 IDNVDLQAATEFGCLXXXXXXXXXXXXXEHGIALLTSMARNVAQADASMKAGLWKRNKYV 724
IDNVDLQAATE GCL EHGIALL SMARNVAQADAS+KAG W+R+KYV
Sbjct: 156 IDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGKWERSKYV 215
Query: 725 GVSLVGK 745
GVSLVGK
Sbjct: 216 GVSLVGK 222
>TAIR9_protein||AT1G17744.1 | Symbols: | unknown protein | chr1:6101355-6101795
REVERSE
Length = 147
Score = 90 bits (221), Expect = 1e-018
Identities = 51/126 (40%), Positives = 73/126 (57%)
Frame = -1
Query: 700 SSFHGGICLSNISSHGSEQSDPVLCGSDGVCCRRINDEASKLRRRLQIHIVYSNPCPSHH 521
+ F+ + LSN++ H S+QS+ + S + IN + LRRRLQI+IV N S H
Sbjct: 7 TGFNRSVGLSNVTCHRSKQSNSMFGSSHRISRWSINHQTPVLRRRLQINIVNPNSGSSDH 66
Query: 520 LQPPLRRLENLPVDLRPAPDDQGVAG*DLGAELLRREVVRALQVPELA*DLQARLSKFLG 341
QPPLRRL++ P A DQ V ++ RR++VRA+ V E ++ A S+FLG
Sbjct: 67 FQPPLRRLKHFPRHFSSASHDQSVTLRHFLLQIFRRKIVRAVNVAEFPEEIHAGFSQFLG 126
Query: 340 DQDRRL 323
D+D RL
Sbjct: 127 DEDPRL 132
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,590,698,424
Number of Sequences: 33410
Number of Extensions: 3590698424
Number of Successful Extensions: 197135522
Number of sequences better than 0.0: 0
|