BLASTX 7.6.2
Query= RU21140 /QuerySize=632
(631 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELL... 167 6e-042
TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSO... 161 5e-040
TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE... 144 4e-035
TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); ... 136 1e-032
TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROT... 131 3e-031
TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transc... 49 2e-006
>TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID
INSENSITIVE); transcription factor | chr1:5149414-5151015 FORWARD
Length = 534
Score = 167 bits (422), Expect = 6e-042
Identities = 93/169 (55%), Positives = 114/169 (67%), Gaps = 6/169 (3%)
Frame = +1
Query: 127 SSSNYELKAIPGKAIFSSQTQFDSSPREPKRLKPXXXXXXXXXXXXXXXXXLQPVVSLPN 306
S++ Y+LKAIPG AI + QF ++ +
Sbjct: 96 SNAEYDLKAIPGDAILN---QFAIDSASSSNQGGGGDTYTTNKRLKCSNGVVETTTA--T 150
Query: 307 NESTRPVVVVDSQENGVRLVHGLMACAEAVQRKNFDLAKALVTQISYLAISQAGAMRKVA 486
ESTR VV+VDSQENGVRLVH L+ACAEAVQ++N +A+ALV QI +LA+SQ GAMRKVA
Sbjct: 151 AESTRHVVLVDSQENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVA 210
Query: 487 TFFAEALAQRIWGVYP-QPPIDHTYSEMLQMHFYETCPYLKFAHFTANQ 630
T+FAEALA+RI+ + P Q PIDH+ S+ LQMHFYETCPYLKFAHFTANQ
Sbjct: 211 TYFAEALARRIYRLSPSQSPIDHSLSDTLQMHFYETCPYLKFAHFTANQ 259
>TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1);
protein binding / transcription factor | chr2:255581-257344 REVERSE
Length = 588
Score = 161 bits (405), Expect = 5e-040
Identities = 87/165 (52%), Positives = 105/165 (63%), Gaps = 1/165 (0%)
Frame = +1
Query: 139 YELKAIPGKAIFSSQTQFDSSPREPKRLKPXXXXXXXXXXXXXXXXXLQPVVSLPNNEST 318
Y+ AI + ++Q + S P + + EST
Sbjct: 147 YQFPAIDSSSSSNNQNKRLKSCSSPDSMVTSTSTGTQIGGVIGTTVTTTTTTTTAAGEST 206
Query: 319 RPVVVVDSQENGVRLVHGLMACAEAVQRKNFDLAKALVTQISYLAISQAGAMRKVATFFA 498
R V++VDSQENGVRLVH LMACAEA+Q+ N LA+ALV QI LA+SQAGAMRKVAT+FA
Sbjct: 207 RSVILVDSQENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFA 266
Query: 499 EALAQRIWGVY-PQPPIDHTYSEMLQMHFYETCPYLKFAHFTANQ 630
EALA+RI+ + PQ IDH S+ LQMHFYETCPYLKFAHFTANQ
Sbjct: 267 EALARRIYRLSPPQNQIDHCLSDTLQMHFYETCPYLKFAHFTANQ 311
>TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1);
transcription factor | chr1:24748327-24749862 FORWARD
Length = 512
Score = 144 bits (363), Expect = 4e-035
Identities = 72/107 (67%), Positives = 87/107 (81%), Gaps = 1/107 (0%)
Frame = +1
Query: 313 STRPVVVVDSQENGVRLVHGLMACAEAVQRKNFDLAKALVTQISYLAISQAGAMRKVATF 492
STR VVV+DSQE GVRLVH L+ACAEAVQ+ N LA ALV + LA SQAGAMRKVAT+
Sbjct: 136 STRSVVVLDSQETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATY 195
Query: 493 FAEALAQRIWGVYPQPPID-HTYSEMLQMHFYETCPYLKFAHFTANQ 630
FAE LA+RI+ +YP+ + ++S+ LQ+HFYE+CPYLKFAHFTANQ
Sbjct: 196 FAEGLARRIYRIYPRDDVALSSFSDTLQIHFYESCPYLKFAHFTANQ 242
>TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription
factor | chr3:819636-821279 REVERSE
Length = 548
Score = 136 bits (342), Expect = 1e-032
Identities = 69/114 (60%), Positives = 90/114 (78%), Gaps = 5/114 (4%)
Frame = +1
Query: 304 NNESTRPVVVVDSQENGVRLVHGLMACAEAVQRKNFDLAKALVTQISYLAISQAGAMRKV 483
++ESTR VV+VDSQE GVRLVH L+ACAEA+ ++N +LA ALV ++ LA SQAGAM KV
Sbjct: 161 SDESTRSVVLVDSQETGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKV 220
Query: 484 ATFFAEALAQRIWGVYPQ-----PPIDHTYSEMLQMHFYETCPYLKFAHFTANQ 630
AT+FA+ALA+RI+ Y ++ ++ E+L+MHFYE+CPYLKFAHFTANQ
Sbjct: 221 ATYFAQALARRIYRDYTAETDVCAAVNPSFEEVLEMHFYESCPYLKFAHFTANQ 274
>TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3);
transcription factor | chr5:5764316-5765887 REVERSE
Length = 524
Score = 131 bits (329), Expect = 3e-031
Identities = 70/118 (59%), Positives = 89/118 (75%), Gaps = 3/118 (2%)
Frame = +1
Query: 280 LQPVVSLPNNESTRPVVVVDSQENGVRLVHGLMACAEAVQRKNFDLAKALVTQISYLAIS 459
L P +ESTR VV++ +E GVRLV L+ACAEAVQ +N LA ALV ++ LA S
Sbjct: 132 LGPWCDSVTSESTRSVVLI--EETGVRLVQALVACAEAVQLENLSLADALVKRVGLLAAS 189
Query: 460 QAGAMRKVATFFAEALAQRIWGVYPQ-PPIDHTYSEMLQMHFYETCPYLKFAHFTANQ 630
QAGAM KVAT+FAEALA+RI+ ++P ID ++ E+LQM+FY++CPYLKFAHFTANQ
Sbjct: 190 QAGAMGKVATYFAEALARRIYRIHPSAAAIDPSFEEILQMNFYDSCPYLKFAHFTANQ 247
>TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor
| chr1:18678177-18679625 REVERSE
Length = 483
Score = 49 bits (115), Expect = 2e-006
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +1
Query: 343 QENGVRLVHGLMACAEAVQRKNFDLAKALVTQISYLAISQAGAMRKVATFFAEALAQRIW 522
+E G+ L+H L+ CA V + A A + Q+S+LA M+++A +F EALA RI
Sbjct: 48 EERGLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRIL 107
Query: 523 GVYP 534
+P
Sbjct: 108 KSWP 111
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,648,337,875
Number of Sequences: 33410
Number of Extensions: 3648337875
Number of Successful Extensions: 202086849
Number of sequences better than 0.0: 0
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