BLASTX 7.6.2
Query= RU21489 /QuerySize=465
(464 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A);... 169 1e-042
TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding... 168 1e-042
TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTA... 164 3e-041
TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding... 163 8e-041
TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA... 160 5e-040
TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA... 159 1e-039
TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |... 142 1e-034
TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding... 138 2e-033
TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7... 136 8e-033
TAIR9_protein||AT1G52740.1 | Symbols: HTA9 | HTA9 (HISTONE H2A P... 89 1e-018
TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding... 87 3e-018
TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 87 4e-018
TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 87 4e-018
TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 87 4e-018
TAIR9_protein||AT4G13570.1 | Symbols: HTA4 | HTA4; DNA binding |... 57 6e-009
>TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A); DNA binding |
chr4:13637515-13638325 REVERSE
Length = 132
Score = 169 bits (426), Expect = 1e-042
Identities = 84/112 (75%), Positives = 89/112 (79%)
Frame = +3
Query: 3 SKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTRI 182
SKAGLQFPVGRIARFLK+GKYAERVGAGAPVYL GNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 183 VPRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKTSKSAPADED* 338
VPRHIQLAVRNDEEL +LLG VTIANGGV+PNIHN+LLPKK S P +ED*
Sbjct: 81 VPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSKPTEED* 132
>TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding |
chr1:18926948-18927443 FORWARD
Length = 133
Score = 168 bits (425), Expect = 1e-042
Identities = 85/111 (76%), Positives = 89/111 (80%)
Frame = +3
Query: 3 SKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTRI 182
SKAGLQFPVGRIARFLK GKYAERVGAGAPVYL GNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 183 VPRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKTSKSAPADED 335
VPRHIQLAVRNDEEL +LLG VTIANGGV+PNIHN+LLPKKT S P+ ED
Sbjct: 81 VPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASKPSAED 131
>TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTANT TO
AGROBACTERIUM TRANSFORMATION 5); DNA binding | chr5:22196540-22197279
FORWARD
Length = 131
Score = 164 bits (414), Expect = 3e-041
Identities = 82/110 (74%), Positives = 88/110 (80%)
Frame = +3
Query: 3 SKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTRI 182
SKAGLQFPVGRIARFLK+GKYAERVGAGAPVYL GNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 183 VPRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKTSKSAPADE 332
VPRHIQLAVRNDEEL +LLG VTIANGGV+PNIHN+LLPKK S P ++
Sbjct: 81 VPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGASKPQED 130
>TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding |
chr3:7229472-7229963 FORWARD
Length = 133
Score = 163 bits (410), Expect = 8e-041
Identities = 84/113 (74%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Frame = +3
Query: 3 SKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTRI 182
SKAGLQFPVGRIARFLK+GKYA RVGAGAPVYL GNAARDNKKTRI
Sbjct: 21 SKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
Query: 183 VPRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKTSKSAP-ADED* 338
VPRHIQLAVRNDEEL +LLG VTIANGGV+PNIH++LLPKK S P ADED*
Sbjct: 81 VPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASKPSADED* 133
>TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA-H2AX | H2AXA;
DNA binding | chr1:2847144-2847676 REVERSE
Length = 143
Score = 160 bits (403), Expect = 5e-040
Identities = 82/105 (78%), Positives = 84/105 (80%)
Frame = +3
Query: 3 SKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTRI 182
SKAGLQFPVGRIARFLKSGKYAERVGAGAPVYL GNAARDNKKTRI
Sbjct: 27 SKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRI 86
Query: 183 VPRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKTSKS 317
VPRHIQLAVRNDEEL +LLGSVTIANGGVLPNIH LLP K K+
Sbjct: 87 VPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKN 131
>TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX |
GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX); DNA binding |
chr1:20414607-20415206 REVERSE
Length = 143
Score = 159 bits (400), Expect = 1e-039
Identities = 81/105 (77%), Positives = 84/105 (80%)
Frame = +3
Query: 3 SKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTRI 182
SKAGLQFPVGRIARFLK+GKYAERVGAGAPVYL GNAARDNKKTRI
Sbjct: 27 SKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRI 86
Query: 183 VPRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKTSKS 317
VPRHIQLAVRNDEEL +LLGSVTIANGGVLPNIH LLP K K+
Sbjct: 87 VPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKN 131
>TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |
chr5:24115605-24116144 REVERSE
Length = 151
Score = 142 bits (356), Expect = 1e-034
Identities = 70/109 (64%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
Frame = +3
Query: 6 KAGLQFPVGRIARFLKSGKYAERVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTRIV 185
KAGLQFPVGRI RFLK G+YA+R+G GAPVY+ GNAARDNKK+RI+
Sbjct: 30 KAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRII 89
Query: 186 PRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKTSKSAPADE 332
PRH+ LA+RNDEELG+LL VTIA+GGVLPNI+++LLPKK S + PA+E
Sbjct: 90 PRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKK-SATKPAEE 137
>TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding |
chr5:575437-576456 FORWARD
Length = 154
Score = 138 bits (346), Expect = 2e-033
Identities = 68/105 (64%), Positives = 80/105 (76%)
Frame = +3
Query: 6 KAGLQFPVGRIARFLKSGKYAERVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTRIV 185
K+GLQFPVGRI R+LK G+Y++RVG GAPVYL GNAARDNKK RI+
Sbjct: 30 KSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRII 89
Query: 186 PRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKTSKSA 320
PRH+ LAVRNDEELG LL VTIA+GGVLPNI+ +LLPKK+ K+A
Sbjct: 90 PRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAA 134
>TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7); DNA binding
| chr5:9792807-9793365 REVERSE
Length = 151
Score = 136 bits (341), Expect = 8e-033
Identities = 70/109 (64%), Positives = 81/109 (74%)
Frame = +3
Query: 6 KAGLQFPVGRIARFLKSGKYAERVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTRIV 185
KAGLQFPVGRIAR+LK G+YA R G+GAPVYL GNAARDNKK RI
Sbjct: 31 KAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIN 90
Query: 186 PRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKTSKSAPADE 332
PRH+ LA+RNDEELGRLL VTIA+GGVLPNI+ +LLPKK++ S+ E
Sbjct: 91 PRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKSTASSSQAE 139
>TAIR9_protein||AT1G52740.1 | Symbols: HTA9 | HTA9 (HISTONE H2A PROTEIN 9); DNA
binding | chr1:19645409-19646221 FORWARD
Length = 135
Score = 89 bits (218), Expect = 1e-018
Identities = 51/105 (48%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
Frame = +3
Query: 3 SKAGLQFPVGRIARFLKSGKYAE-RVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTR 179
S+AGLQFPVGR+ R LK+ A RVGA A VY GNA++D K R
Sbjct: 31 SRAGLQFPVGRVHRLLKTRSTAHGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKR 90
Query: 180 IVPRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKTSK 314
I PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K +
Sbjct: 91 ISPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKSAKE 134
>TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding |
chr3:20196532-20197466 FORWARD
Length = 137
Score = 87 bits (215), Expect = 3e-018
Identities = 51/105 (48%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Frame = +3
Query: 3 SKAGLQFPVGRIARFLKSGKYAE-RVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTR 179
++AG+QFPVGRI R LK+ A RVGA A VY GNA++D K R
Sbjct: 33 ARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKR 92
Query: 180 IVPRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKTSK 314
I PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K T +
Sbjct: 93 ITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKTTKE 136
>TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 87 bits (214), Expect = 4e-018
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Frame = +3
Query: 3 SKAGLQFPVGRIARFLKSGKYAE-RVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTR 179
S+AG+QFPVGRI R LK A RVGA A VY GNA++D K R
Sbjct: 33 SRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKR 92
Query: 180 IVPRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKT 308
I PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K T
Sbjct: 93 ITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNKVT 134
>TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 87 bits (214), Expect = 4e-018
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Frame = +3
Query: 3 SKAGLQFPVGRIARFLKSGKYAE-RVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTR 179
S+AG+QFPVGRI R LK A RVGA A VY GNA++D K R
Sbjct: 33 SRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKR 92
Query: 180 IVPRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKT 308
I PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K T
Sbjct: 93 ITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNKVT 134
>TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 87 bits (214), Expect = 4e-018
Identities = 52/103 (50%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Frame = +3
Query: 3 SKAGLQFPVGRIARFLKSGKYAE-RVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTR 179
S+AG+QFPVGRI R LK A RVGA A VY GNA++D K R
Sbjct: 33 SRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKR 92
Query: 180 IVPRHIQLAVRNDEELGRLLGSVTIANGGVLPNIHNMLLPKKT 308
I PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K T
Sbjct: 93 ITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNKVT 134
>TAIR9_protein||AT4G13570.1 | Symbols: HTA4 | HTA4; DNA binding |
chr4:7884516-7885664 FORWARD
Length = 119
Score = 57 bits (135), Expect = 6e-009
Identities = 37/92 (40%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +3
Query: 12 GLQFPVGRIARFLKSGKYA-ERVGAGAPVYLFPXXXXXXXXXXXXXGNAARDNKKTRIVP 188
G F V RI + LK+ A VGA VY+ N ++D K RI P
Sbjct: 28 GEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITP 87
Query: 189 RHIQLAVRNDEELGRLLGSVTIANGGVLPNIH 284
RH+QLA+R DEEL L+ TI G V+P+IH
Sbjct: 88 RHLQLAIRGDEELDTLIKG-TIIGGSVIPHIH 118
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,709,709,958
Number of Sequences: 33410
Number of Extensions: 3709709958
Number of Successful Extensions: 207080749
Number of sequences better than 0.0: 0
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