BLASTX 7.6.2
Query= RU22111 /QuerySize=549
(548 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, ... 204 4e-053
TAIR9_protein||AT4G38130.1 | Symbols: HD1, HDA19, ATHD1, HDA1, R... 163 8e-041
TAIR9_protein||AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, H... 163 8e-041
TAIR9_protein||AT5G35600.1 | Symbols: HDA7 | HDA7 (histone deace... 144 3e-035
TAIR9_protein||AT3G44680.1 | Symbols: HDA9, HDA09 | HDA9 (HISTON... 106 9e-024
TAIR9_protein||AT3G44490.1 | Symbols: hda17 | hda17 (histone dea... 103 8e-023
TAIR9_protein||AT3G44660.1 | Symbols: hda10 | hda10 (histone dea... 81 3e-016
>TAIR9_protein||AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 |
HDA6 (HISTONE DEACETYLASE 6); histone deacetylase |
chr5:25315834-25318227 REVERSE
Length = 472
Score = 204 bits (517), Expect = 4e-053
Identities = 98/142 (69%), Positives = 106/142 (74%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
ADCLR+LRS+NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEP+NKLPYNEY+EYFGPDY
Sbjct: 294 ADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDY 353
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQXXXXXXXXXXXXXXRMDHR 187
TLHVD MENLN+PK+ME IRNTLLEQLS L HAPSV FQ M+ R
Sbjct: 354 TLHVDPSPMENLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPVNRVLDEPEDDMETR 413
Query: 186 PKRRIWEGVXXXXXXXXXXEKP 121
PK RIW G +KP
Sbjct: 414 PKPRIWSGTATYESDSDDDDKP 435
>TAIR9_protein||AT4G38130.1 | Symbols: HD1, HDA19, ATHD1, HDA1, RPD3A | HD1
(HISTONE DEACETYLASE 1); basal transcription repressor/ histone
deacetylase/ protein binding | chr4:17896493-17899057 REVERSE
Length = 502
Score = 163 bits (411), Expect = 8e-041
Identities = 73/101 (72%), Positives = 87/101 (86%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A+C++++RSFNVPL++LGGGGYTIRNVARCWCYET VA+GVE E+K+P +EYYEYFGPDY
Sbjct: 290 AECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDY 349
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
TLHV NMEN NS + +E IRN LL LS+L HAPSVPFQ
Sbjct: 350 TLHVAPSNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQ 390
>TAIR9_protein||AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19 | HD1
(HISTONE DEACETYLASE 1); basal transcription repressor/ histone
deacetylase/ protein binding | chr4:17896663-17899057 REVERSE
Length = 470
Score = 163 bits (411), Expect = 8e-041
Identities = 73/101 (72%), Positives = 87/101 (86%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A+C++++RSFNVPL++LGGGGYTIRNVARCWCYET VA+GVE E+K+P +EYYEYFGPDY
Sbjct: 290 AECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDY 349
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
TLHV NMEN NS + +E IRN LL LS+L HAPSVPFQ
Sbjct: 350 TLHVAPSNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQ 390
>TAIR9_protein||AT5G35600.1 | Symbols: HDA7 | HDA7 (histone deacetylase7);
histone deacetylase | chr5:13770121-13771712 REVERSE
Length = 410
Score = 144 bits (363), Expect = 3e-035
Identities = 68/124 (54%), Positives = 85/124 (68%)
Frame = -3
Query: 543 DCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYT 364
DCL+Y+RSFNVPLM+LGGGGYT+ NVARCWCYETA+AVG + +N LP N+Y +YF PDY
Sbjct: 286 DCLQYVRSFNVPLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYK 345
Query: 363 LHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQXXXXXXXXXXXXXXRMDHRP 184
LH+ N +NLN+ ++ +R TLL QLS + HAPSVPFQ M+ R
Sbjct: 346 LHILPTNRQNLNTRLDIITMRETLLAQLSLVMHAPSVPFQDTPSSSQATEAAEVDMEKRN 405
Query: 183 KRRI 172
RI
Sbjct: 406 DPRI 409
>TAIR9_protein||AT3G44680.1 | Symbols: HDA9, HDA09 | HDA9 (HISTONE DEACETYLASE
9); histone deacetylase | chr3:16226769-16229752 REVERSE
Length = 427
Score = 106 bits (264), Expect = 9e-024
Identities = 45/101 (44%), Positives = 70/101 (69%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A+C+++++ FN+PL+V GGGGYT NVARCW ET + + E N++P N+Y +YF PD+
Sbjct: 279 AECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDF 338
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
+L + ++ENLN+ + +I+ +LE L + HAPSV Q
Sbjct: 339 SLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQ 379
>TAIR9_protein||AT3G44490.1 | Symbols: hda17 | hda17 (histone deacetylase 17);
histone deacetylase | chr3:16097479-16098386 FORWARD
Length = 159
Score = 103 bits (256), Expect = 8e-023
Identities = 44/101 (43%), Positives = 69/101 (68%)
Frame = -3
Query: 546 ADCLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDY 367
A+C+++++ FN+PL+V GGGGYT NVARCW ET + + E N++ N+Y +YF PD+
Sbjct: 11 AECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISENDYIKYFAPDF 70
Query: 366 TLHVDTCNMENLNSPKEMENIRNTLLEQLSRLPHAPSVPFQ 244
+L + ++ENLN+ + +I+ +LE L + HAPSV Q
Sbjct: 71 SLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQ 111
>TAIR9_protein||AT3G44660.1 | Symbols: hda10 | hda10 (histone deacetylase 10);
histone deacetylase | chr3:16214964-16215785 REVERSE
Length = 143
Score = 81 bits (199), Expect = 3e-016
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = -3
Query: 489 GGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYTLHVDTCNMENLNSPKEME 310
GGYT NVARCW ET + + E N++P N+Y +YF PD++L + ++ENLN+ +
Sbjct: 14 GGYTKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYIS 73
Query: 309 NIRNTLLEQLSRLPHAPSVPFQ 244
+I+ +LE L + HAPSV Q
Sbjct: 74 SIKVQILENLRYIQHAPSVQMQ 95
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,855,591,728
Number of Sequences: 33410
Number of Extensions: 3855591728
Number of Successful Extensions: 217795096
Number of sequences better than 0.0: 0
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