BLASTX 7.6.2
Query= RU22158 /QuerySize=414
(413 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G19790.1 | Symbols: | clathrin adaptor comple... 181 1e-046
TAIR9_protein||AT4G35410.2 | Symbols: | clathrin adaptor comple... 101 2e-022
TAIR9_protein||AT2G17380.1 | Symbols: AP19 | AP19; protein bindi... 99 8e-022
TAIR9_protein||AT4G35410.1 | Symbols: | clathrin adaptor comple... 97 2e-021
TAIR9_protein||AT1G47830.1 | Symbols: | clathrin coat assembly ... 96 7e-021
TAIR9_protein||AT3G50860.1 | Symbols: | clathrin adaptor comple... 78 1e-015
>TAIR9_protein||AT2G19790.1 | Symbols: | clathrin adaptor complex small chain
family protein | chr2:8527302-8528395 FORWARD
Length = 144
Score = 181 bits (459), Expect = 1e-046
Identities = 89/109 (81%), Positives = 93/109 (85%)
Frame = -2
Query: 328 FILMVNKQGQTRLAQXXXXXXXXXXXXXXXXIVRKCLARNEQQCSFVEHRNYKIVYRRYA 149
FILMVNKQGQTRLAQ IVRKCLARN+QQCSFVEHRNYKIVYRRYA
Sbjct: 5 FILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIVYRRYA 64
Query: 148 SLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHF 2
SLFF+VGVD+DENELAILEFIHLLVETMD+HFGNVCELDIMFHLEKAHF
Sbjct: 65 SLFFMVGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMFHLEKAHF 113
>TAIR9_protein||AT4G35410.2 | Symbols: | clathrin adaptor complex small chain
family protein | chr4:16832572-16833796 FORWARD
Length = 163
Score = 101 bits (250), Expect = 2e-022
Identities = 46/109 (42%), Positives = 71/109 (65%)
Frame = -2
Query: 328 FILMVNKQGQTRLAQXXXXXXXXXXXXXXXXIVRKCLARNEQQCSFVEHRNYKIVYRRYA 149
F+L+V++QG+ RL + + L R + C+FVE R YK+VY+RYA
Sbjct: 4 FVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYKRYA 63
Query: 148 SLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHF 2
SL+F + +D ++NEL +LE IH VE +DR+FG+VCELD++F+ KA++
Sbjct: 64 SLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYY 112
>TAIR9_protein||AT2G17380.1 | Symbols: AP19 | AP19; protein binding / protein
transporter | chr2:7553122-7554887 FORWARD
Length = 162
Score = 99 bits (245), Expect = 8e-022
Identities = 45/109 (41%), Positives = 70/109 (64%)
Frame = -2
Query: 328 FILMVNKQGQTRLAQXXXXXXXXXXXXXXXXIVRKCLARNEQQCSFVEHRNYKIVYRRYA 149
F+L+V++QG+ RL + + L R + C+F+E R YK+VY+RYA
Sbjct: 4 FVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYKRYA 63
Query: 148 SLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHF 2
SL+F + +D +NEL +LE IH VE +DR+FG+VCELD++F+ KA++
Sbjct: 64 SLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYY 112
>TAIR9_protein||AT4G35410.1 | Symbols: | clathrin adaptor complex small chain
family protein | chr4:16832572-16833476 FORWARD
Length = 125
Score = 97 bits (241), Expect = 2e-021
Identities = 45/106 (42%), Positives = 68/106 (64%)
Frame = -2
Query: 328 FILMVNKQGQTRLAQXXXXXXXXXXXXXXXXIVRKCLARNEQQCSFVEHRNYKIVYRRYA 149
F+L+V++QG+ RL + + L R + C+FVE R YK+VY+RYA
Sbjct: 4 FVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYKRYA 63
Query: 148 SLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEK 11
SL+F + +D ++NEL +LE IH VE +DR+FG+VCELD++F+ K
Sbjct: 64 SLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHK 109
>TAIR9_protein||AT1G47830.1 | Symbols: | clathrin coat assembly protein,
putative | chr1:17613346-17614784 REVERSE
Length = 143
Score = 96 bits (237), Expect = 7e-021
Identities = 49/108 (45%), Positives = 67/108 (62%)
Frame = -2
Query: 328 FILMVNKQGQTRLAQXXXXXXXXXXXXXXXXIVRKCLARNEQQCSFVEHRNYKIVYRRYA 149
FIL+ N+QG+TRLA+ + R + R+ + +FVE R +K++YRRYA
Sbjct: 4 FILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYRRYA 63
Query: 148 SLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAH 5
LFF V VD +NELA LE IHL VE +D F NVCELD++F+ K +
Sbjct: 64 GLFFSVCVDITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKVY 111
>TAIR9_protein||AT3G50860.1 | Symbols: | clathrin adaptor complex small chain
family protein | chr3:18902346-18903959 FORWARD
Length = 167
Score = 78 bits (191), Expect = 1e-015
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Frame = -2
Query: 325 ILMVNKQGQTRLAQXXXXXXXXXXXXXXXXIVRKCLARNEQQCSFVEHRNY-----KIVY 161
++M+N QG+ RLA+ + +R E +F+E + ++VY
Sbjct: 5 VMMMNTQGKPRLAKFYDYLPVEKQQELIRGVFSVLCSRPENVSNFLEIESLFGPDSRLVY 64
Query: 160 RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAH 5
+ YA+L+F++ D ENELA+L+ I +LVET+D+ F NVCELDI+F+ K H
Sbjct: 65 KHYATLYFVLVFDGSENELAMLDLIQVLVETLDKCFSNVCELDIVFNYSKMH 116
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,855,591,728
Number of Sequences: 33410
Number of Extensions: 3855591728
Number of Successful Extensions: 217795096
Number of sequences better than 0.0: 0
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