BLASTX 7.6.2
Query= RU22194 /QuerySize=641
(640 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G09960.1 | Symbols: | unknown protein | chr5:... 144 4e-035
TAIR9_protein||AT5G64850.1 | Symbols: | unknown protein | chr5:... 106 2e-023
TAIR9_protein||AT5G19473.1 | Symbols: | FUNCTIONS IN: molecular... 91 7e-019
>TAIR9_protein||AT5G09960.1 | Symbols: | unknown protein | chr5:3106503-3107658
FORWARD
Length = 113
Score = 144 bits (363), Expect = 4e-035
Identities = 72/110 (65%), Positives = 84/110 (76%), Gaps = 9/110 (8%)
Frame = +3
Query: 156 DDRKEKNAPWLSVPQFGDWDQK-GGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELI 332
DDRKEKN PWLSVPQFGDWDQK GG +PDYS+DF+KIREMRKQNKRD SRASLGNEEELI
Sbjct: 3 DDRKEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELI 62
Query: 333 -----ASNTANVGAAHNDIHH---PHYHQSTHSPTARRSIFSYFNCCIKA 458
A++TA + ++ P +H HSP+ RRS+FS FNCC+KA
Sbjct: 63 KPPESATSTAELTTVQSENQREFSPSHHHQPHSPSTRRSMFSCFNCCVKA 112
>TAIR9_protein||AT5G64850.1 | Symbols: | unknown protein |
chr5:25921585-25923038 FORWARD
Length = 115
Score = 106 bits (263), Expect = 2e-023
Identities = 52/61 (85%), Positives = 56/61 (91%), Gaps = 2/61 (3%)
Frame = +3
Query: 153 MDDRKE-KNAPWLSVPQFGDWDQKGGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEEL 329
M+DRKE KN+PWLSVPQFGDWDQKGG + DYS+DFSKIREMRK NKRD SRASLGNEEEL
Sbjct: 1 MEDRKENKNSPWLSVPQFGDWDQKGGSI-DYSMDFSKIREMRKLNKRDASRASLGNEEEL 59
Query: 330 I 332
I
Sbjct: 60 I 60
>TAIR9_protein||AT5G19473.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Defence
response, Rin4 (InterPro:IPR008700); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G09960.1); Has 39 Blast hits to 39
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr5:6569268-6570680 FORWARD
Length = 100
Score = 91 bits (223), Expect = 7e-019
Identities = 45/100 (45%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Frame = +3
Query: 159 DRKEKNAPWLSVPQFGDWDQKG-GQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELIA 335
D++ +NA W VPQFG WDQKG +YS+ FSK R RKQNK V +SLG+E+EL+
Sbjct: 2 DKRRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSLGSEQELMV 61
Query: 336 SNTANVGAAHNDIHHPHYHQSTHSPTARRSIFSYFNCCIK 455
S N H +HH H Q ++ I +Y NCCI+
Sbjct: 62 SVRRN----HQQLHHRHETQDDDPVMKKKRILTYINCCIR 97
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,855,591,728
Number of Sequences: 33410
Number of Extensions: 3855591728
Number of Successful Extensions: 217795096
Number of sequences better than 0.0: 0
|