BLASTX 7.6.2
Query= RU22385 /QuerySize=331
(330 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G36240.1 | Symbols: | 60S ribosomal protein L... 135 5e-033
TAIR9_protein||AT1G77940.1 | Symbols: | 60S ribosomal protein L... 133 2e-032
TAIR9_protein||AT3G18740.1 | Symbols: | 60S ribosomal protein L... 132 6e-032
>TAIR9_protein||AT1G36240.1 | Symbols: | 60S ribosomal protein L30 (RPL30A) |
chr1:13614890-13616233 FORWARD
Length = 113
Score = 135 bits (339), Expect = 5e-033
Identities = 64/75 (85%), Positives = 72/75 (96%)
Frame = -2
Query: 275 MVAVKKTKKTHESINNRLALVMKSGKYTLGYKTVIDTLRSSKGKLIIISNNCPPLRKSEI 96
MVA KKTKK+HE IN+RLALVMKSGKYTLGYK+V+ +LRSSKGKLI+IS+NCPPLR+SEI
Sbjct: 1 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60
Query: 95 EYYAMLAKVGVHHYN 51
EYYAMLAKVGVHHYN
Sbjct: 61 EYYAMLAKVGVHHYN 75
>TAIR9_protein||AT1G77940.1 | Symbols: | 60S ribosomal protein L30 (RPL30B) |
chr1:29304116-29305288 REVERSE
Length = 113
Score = 133 bits (334), Expect = 2e-032
Identities = 63/76 (82%), Positives = 70/76 (92%)
Frame = -2
Query: 275 MVAVKKTKKTHESINNRLALVMKSGKYTLGYKTVIDTLRSSKGKLIIISNNCPPLRKSEI 96
MV KKTKK+HE IN+RLALVMKSGKYTLGYK+V+ +LR SKGKLI+IS NCPPLR+SEI
Sbjct: 1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60
Query: 95 EYYAMLAKVGVHHYNG 48
EYYAMLAKVGVHHYNG
Sbjct: 61 EYYAMLAKVGVHHYNG 76
>TAIR9_protein||AT3G18740.1 | Symbols: | 60S ribosomal protein L30 (RPL30C) |
chr3:6453437-6453870 FORWARD
Length = 113
Score = 132 bits (330), Expect = 6e-032
Identities = 63/76 (82%), Positives = 71/76 (93%)
Frame = -2
Query: 275 MVAVKKTKKTHESINNRLALVMKSGKYTLGYKTVIDTLRSSKGKLIIISNNCPPLRKSEI 96
MVA KK KK+HE IN+RLALVMKSGKYTLGYK+V+ +LRSSKGKLI+IS+NCPPLR+SEI
Sbjct: 1 MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60
Query: 95 EYYAMLAKVGVHHYNG 48
EYYAMLAKVGVH YNG
Sbjct: 61 EYYAMLAKVGVHRYNG 76
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,884,545,436
Number of Sequences: 33410
Number of Extensions: 3884545436
Number of Successful Extensions: 217906452
Number of sequences better than 0.0: 0
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