BLASTX 7.6.2
Query= RU22395 /QuerySize=369
(368 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C |... 74 1e-014
TAIR9_protein||AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A | ATRAB1... 74 1e-014
TAIR9_protein||AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | AT... 72 7e-014
TAIR9_protein||AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRA... 71 9e-014
TAIR9_protein||AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATR... 59 3e-010
TAIR9_protein||AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a ... 59 3e-010
TAIR9_protein||AT3G53610.2 | Symbols: ATRAB8 | ATRAB8; GTP bindi... 59 3e-010
TAIR9_protein||AT3G46060.2 | Symbols: ARA3 | ATRAB8A; GTP bindin... 59 3e-010
TAIR9_protein||AT3G53610.3 | Symbols: ATRAB8 | ATRAB8; GTP bindi... 59 3e-010
TAIR9_protein||AT3G46060.3 | Symbols: ARA3 | ATRAB8A; GTP bindin... 59 3e-010
TAIR9_protein||AT5G59840.1 | Symbols: | Ras-related GTP-binding... 59 3e-010
TAIR9_protein||AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E | ATRABE... 59 4e-010
TAIR9_protein||AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E... 59 4e-010
TAIR9_protein||AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E... 52 5e-008
TAIR9_protein||AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1,... 49 6e-007
TAIR9_protein||AT1G43890.2 | Symbols: ATRAB18, RAB18-1, RABC1 | ... 49 6e-007
TAIR9_protein||AT1G43890.3 | Symbols: ATRAB18, RAB18-1, RABC1 | ... 49 6e-007
>TAIR9_protein||AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | ATRAB1C; GTP
binding | chr4:9773721-9775424 REVERSE
Length = 203
Score = 74 bits (180), Expect = 1e-014
Identities = 35/35 (100%)
Frame = -1
Query: 137 SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 33
SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG
Sbjct: 32 SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 66
Score = 68 bits (164), Expect = 1e-012
Identities = 32/34 (94%)
Frame = -3
Query: 231 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDFIL 130
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD L
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL 34
>TAIR9_protein||AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A | ATRAB1A; GTP binding
| chr5:19167029-19168718 FORWARD
Length = 203
Score = 74 bits (180), Expect = 1e-014
Identities = 35/35 (100%)
Frame = -1
Query: 137 SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 33
SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG
Sbjct: 32 SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 66
Score = 68 bits (164), Expect = 1e-012
Identities = 32/34 (94%)
Frame = -3
Query: 231 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDFIL 130
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD L
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL 34
>TAIR9_protein||AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | ATFP8; GTP
binding / GTP-dependent protein binding / myosin XI tail binding |
chr3:3709490-3711397 REVERSE
Length = 206
Score = 72 bits (174), Expect = 7e-014
Identities = 32/35 (91%), Positives = 35/35 (100%)
Frame = -1
Query: 137 SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 33
+Y+DSYISTIGVDFKIRT+EQDGKTIKLQIWDTAG
Sbjct: 32 AYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAG 66
Score = 60 bits (143), Expect = 3e-010
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = -3
Query: 231 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD 139
M+ EYDYLFKLLLIGDS VGKSCLLLRFADD
Sbjct: 1 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADD 31
>TAIR9_protein||AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A |
ARA-5 (ARABIDOPSIS RAS 5); GTP binding | chr1:400350-401788 REVERSE
Length = 204
Score = 71 bits (173), Expect = 9e-014
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = -1
Query: 137 SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 33
SY++SYISTIGVDFKIRTVEQDGKTIKLQIWDTAG
Sbjct: 32 SYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 66
Score = 66 bits (160), Expect = 3e-012
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = -3
Query: 231 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD 139
MNPEYDYLFKLLLIGDSGVGKSCLLLRF+DD
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDD 31
>TAIR9_protein||AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A | ATRAB8A;
GTP binding | chr3:16917908-16919740 FORWARD
Length = 217
Score = 59 bits (142), Expect = 3e-010
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -1
Query: 137 SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 33
S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAG
Sbjct: 39 SFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAG 73
Score = 54 bits (128), Expect = 1e-008
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -3
Query: 243 PGPAMNPEYDYLFKLLLIGDSGVGKSCLLLRFAD 142
P +YDYL KLLLIGDSGVGKSCLLLRF+D
Sbjct: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSD 37
>TAIR9_protein||AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a | ATRAB8; GTP
binding | chr3:19876531-19878264 REVERSE
Length = 217
Score = 59 bits (142), Expect = 3e-010
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -1
Query: 137 SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 33
S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAG
Sbjct: 39 SFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAG 73
Score = 54 bits (128), Expect = 1e-008
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -3
Query: 243 PGPAMNPEYDYLFKLLLIGDSGVGKSCLLLRFAD 142
P +YDYL KLLLIGDSGVGKSCLLLRF+D
Sbjct: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSD 37
>TAIR9_protein||AT3G53610.2 | Symbols: ATRAB8 | ATRAB8; GTP binding |
chr3:19876531-19878264 REVERSE
Length = 217
Score = 59 bits (142), Expect = 3e-010
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -1
Query: 137 SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 33
S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAG
Sbjct: 39 SFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAG 73
Score = 54 bits (128), Expect = 1e-008
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -3
Query: 243 PGPAMNPEYDYLFKLLLIGDSGVGKSCLLLRFAD 142
P +YDYL KLLLIGDSGVGKSCLLLRF+D
Sbjct: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSD 37
>TAIR9_protein||AT3G46060.2 | Symbols: ARA3 | ATRAB8A; GTP binding |
chr3:16917908-16919740 FORWARD
Length = 217
Score = 59 bits (142), Expect = 3e-010
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -1
Query: 137 SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 33
S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAG
Sbjct: 39 SFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAG 73
Score = 54 bits (128), Expect = 1e-008
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -3
Query: 243 PGPAMNPEYDYLFKLLLIGDSGVGKSCLLLRFAD 142
P +YDYL KLLLIGDSGVGKSCLLLRF+D
Sbjct: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSD 37
>TAIR9_protein||AT3G53610.3 | Symbols: ATRAB8 | ATRAB8; GTP binding |
chr3:19876531-19878264 REVERSE
Length = 217
Score = 59 bits (142), Expect = 3e-010
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -1
Query: 137 SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 33
S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAG
Sbjct: 39 SFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAG 73
Score = 54 bits (128), Expect = 1e-008
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -3
Query: 243 PGPAMNPEYDYLFKLLLIGDSGVGKSCLLLRFAD 142
P +YDYL KLLLIGDSGVGKSCLLLRF+D
Sbjct: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSD 37
>TAIR9_protein||AT3G46060.3 | Symbols: ARA3 | ATRAB8A; GTP binding |
chr3:16917908-16919740 FORWARD
Length = 217
Score = 59 bits (142), Expect = 3e-010
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -1
Query: 137 SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 33
S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAG
Sbjct: 39 SFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAG 73
Score = 54 bits (128), Expect = 1e-008
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -3
Query: 243 PGPAMNPEYDYLFKLLLIGDSGVGKSCLLLRFAD 142
P +YDYL KLLLIGDSGVGKSCLLLRF+D
Sbjct: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSD 37
>TAIR9_protein||AT5G59840.1 | Symbols: | Ras-related GTP-binding family protein
| chr5:24107450-24109049 REVERSE
Length = 217
Score = 59 bits (142), Expect = 3e-010
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = -1
Query: 137 SYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 33
S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAG
Sbjct: 39 SFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAG 73
Score = 54 bits (128), Expect = 1e-008
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -3
Query: 243 PGPAMNPEYDYLFKLLLIGDSGVGKSCLLLRFAD 142
P +YDYL KLLLIGDSGVGKSCLLLRF+D
Sbjct: 4 PPARARADYDYLIKLLLIGDSGVGKSCLLLRFSD 37
>TAIR9_protein||AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E | ATRABE1E (ARABIDOPSIS
RAB GTPASE HOMOLOG E1E); GTP binding | chr3:3034687-3036379 FORWARD
Length = 219
Score = 59 bits (141), Expect = 4e-010
Identities = 30/44 (68%), Positives = 34/44 (77%), Gaps = 3/44 (6%)
Frame = -1
Query: 155 CGLLMIS---YLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 33
C LL S + S+I+TIG+DFKIRTVE DGK IKLQIWDTAG
Sbjct: 30 CLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAG 73
Score = 56 bits (133), Expect = 4e-009
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -3
Query: 222 EYDYLFKLLLIGDSGVGKSCLLLRFADD 139
+YDYL KLLLIGDSGVGKSCLLLRF+DD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDD 38
>TAIR9_protein||AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D |
ATRAB8C; GTP binding | chr5:883679-885158 FORWARD
Length = 217
Score = 59 bits (141), Expect = 4e-010
Identities = 30/44 (68%), Positives = 34/44 (77%), Gaps = 3/44 (6%)
Frame = -1
Query: 155 CGLLMIS---YLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAG 33
C LL S + S+I+TIG+DFKIRTVE DGK IKLQIWDTAG
Sbjct: 30 CLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAG 73
Score = 56 bits (133), Expect = 4e-009
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -3
Query: 222 EYDYLFKLLLIGDSGVGKSCLLLRFADD 139
+YDYL KLLLIGDSGVGKSCLLLRF+DD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDD 38
>TAIR9_protein||AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D |
ATRAB8C; GTP binding | chr5:883713-885158 FORWARD
Length = 207
Score = 52 bits (123), Expect = 5e-008
Identities = 33/63 (52%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = -1
Query: 218 MTTCLSFC*SVILVSASHV-YFCGLLMISYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 42
M T SF S I V V YF +++S S + +DFKIRTVE DGK IKLQIWD
Sbjct: 1 MITSSSFFSSAIAVWGRVVCYFDSQMILSLQVSLLPLGIIDFKIRTVELDGKRIKLQIWD 60
Query: 41 TAG 33
TAG
Sbjct: 61 TAG 63
>TAIR9_protein||AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1,
ATRAB-C1 | ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding |
chr1:16646934-16648395 FORWARD
Length = 213
Score = 49 bits (114), Expect = 6e-007
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = -3
Query: 225 PEYDYLFKLLLIGDSGVGKSCLLLRFADD 139
PE+DYLFK+LLIGDSGVGKS LLL F +
Sbjct: 8 PEFDYLFKVLLIGDSGVGKSSLLLSFTSN 36
>TAIR9_protein||AT1G43890.2 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18
(ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding |
chr1:16646934-16648395 FORWARD
Length = 213
Score = 49 bits (114), Expect = 6e-007
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = -3
Query: 225 PEYDYLFKLLLIGDSGVGKSCLLLRFADD 139
PE+DYLFK+LLIGDSGVGKS LLL F +
Sbjct: 8 PEFDYLFKVLLIGDSGVGKSSLLLSFTSN 36
>TAIR9_protein||AT1G43890.3 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18
(ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding |
chr1:16646934-16648395 FORWARD
Length = 213
Score = 49 bits (114), Expect = 6e-007
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = -3
Query: 225 PEYDYLFKLLLIGDSGVGKSCLLLRFADD 139
PE+DYLFK+LLIGDSGVGKS LLL F +
Sbjct: 8 PEFDYLFKVLLIGDSGVGKSSLLLSFTSN 36
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,884,545,436
Number of Sequences: 33410
Number of Extensions: 3884545436
Number of Successful Extensions: 217906452
Number of sequences better than 0.0: 0
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