BLASTX 7.6.2
Query= RU22415 /QuerySize=217
(216 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G78600.1 | Symbols: LZF1, STH3 | LZF1 (LIGHT-R... 103 3e-023
TAIR9_protein||AT1G06040.2 | Symbols: STO | STO (SALT TOLERANCE)... 78 8e-016
TAIR9_protein||AT1G06040.1 | Symbols: STO | STO (SALT TOLERANCE)... 78 8e-016
TAIR9_protein||AT2G31380.1 | Symbols: STH | STH; protein domain ... 77 2e-015
TAIR9_protein||AT4G10240.1 | Symbols: | zinc finger (B-box type... 72 5e-014
TAIR9_protein||AT2G21320.1 | Symbols: | zinc finger (B-box type... 68 9e-013
TAIR9_protein||AT4G39070.1 | Symbols: | zinc finger (B-box type... 67 1e-012
TAIR9_protein||AT1G75540.1 | Symbols: STH2 | STH2 (SALT TOLERANC... 67 2e-012
TAIR9_protein||AT4G38960.1 | Symbols: | zinc finger (B-box type... 66 3e-012
TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger... 60 3e-010
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 60 3e-010
TAIR9_protein||AT5G15840.2 | Symbols: CO, FG | CO (CONSTANS); tr... 60 3e-010
TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger... 59 4e-010
TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like... 59 5e-010
TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONST... 59 7e-010
TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONST... 59 7e-010
TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (const... 55 6e-009
>TAIR9_protein||AT1G78600.1 | Symbols: LZF1, STH3 | LZF1 (LIGHT-REGULATED ZINC
FINGER PROTEIN 1); transcription factor/ zinc ion binding |
chr1:29567370-29568662 FORWARD
Length = 300
Score = 103 bits (255), Expect = 3e-023
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = +2
Query: 38 MKIQCNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLSAS 187
MKIQCNVCE AEA VLCCADEAALCWACDEK+HAANKLA KHQRVPLSAS
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSAS 50
>TAIR9_protein||AT1G06040.2 | Symbols: STO | STO (SALT TOLERANCE); DNA binding /
protein binding / transcription factor/ zinc ion binding |
chr1:1828957-1829659 REVERSE
Length = 178
Score = 78 bits (191), Expect = 8e-016
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = +2
Query: 38 MKIQCNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLSA 184
MKIQC+VCE A A V+CCADEAALC CD ++HAANKLASKHQR+ L++
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNS 49
>TAIR9_protein||AT1G06040.1 | Symbols: STO | STO (SALT TOLERANCE); DNA binding /
protein binding / transcription factor/ zinc ion binding |
chr1:1828662-1829659 REVERSE
Length = 249
Score = 78 bits (191), Expect = 8e-016
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = +2
Query: 38 MKIQCNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLSA 184
MKIQC+VCE A A V+CCADEAALC CD ++HAANKLASKHQR+ L++
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNS 49
>TAIR9_protein||AT2G31380.1 | Symbols: STH | STH; protein domain specific
binding / transcription factor/ zinc ion binding |
chr2:13382150-13383302 FORWARD
Length = 239
Score = 77 bits (188), Expect = 2e-015
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +2
Query: 38 MKIQCNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLSA 184
MKIQC+VCE A A ++CCADEAALC CD +VHAANKLASKHQR+ L +
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDS 49
>TAIR9_protein||AT4G10240.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:6368967-6369526 REVERSE
Length = 163
Score = 72 bits (176), Expect = 5e-014
Identities = 33/47 (70%), Positives = 35/47 (74%)
Frame = +2
Query: 38 MKIQCNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPL 178
MKIQC VCE AEA VLCC+DEA LC CD KVH ANKL +H RV L
Sbjct: 1 MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVAL 47
>TAIR9_protein||AT2G21320.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:9126502-9127652 FORWARD
Length = 173
Score = 68 bits (165), Expect = 9e-013
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +2
Query: 38 MKIQCNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLS 181
M+I C+ CE+A A V C ADEAALC +CDEKVH NKLAS+H RV L+
Sbjct: 1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLA 48
>TAIR9_protein||AT4G39070.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:18205061-18206421 REVERSE
Length = 243
Score = 67 bits (163), Expect = 1e-012
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = +2
Query: 38 MKIQCNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLSA 184
MKI C VC+ EA+V CCADEAALC CD VH ANKLA KH R L++
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTS 49
>TAIR9_protein||AT1G75540.1 | Symbols: STH2 | STH2 (SALT TOLERANCE HOMOLOG2);
transcription factor/ zinc ion binding | chr1:28366059-28367398
FORWARD
Length = 332
Score = 67 bits (162), Expect = 2e-012
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +2
Query: 38 MKIQCNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPL 178
MKI+C+VC+ EA+V C ADEA+LC CD +VH ANKLASKH R L
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSL 47
>TAIR9_protein||AT4G38960.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:18161576-18163045 FORWARD
Length = 184
Score = 66 bits (160), Expect = 3e-012
Identities = 30/48 (62%), Positives = 35/48 (72%)
Frame = +2
Query: 38 MKIQCNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLS 181
M+I C+ CE A A + C ADEAALC CDEKVH NKLAS+H RV L+
Sbjct: 1 MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLA 48
>TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type)
family protein | chr5:23355573-23356729 FORWARD
Length = 356
Score = 60 bits (143), Expect = 3e-010
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +2
Query: 50 CNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPL 178
C VCE A A V C AD AALC +CD +H+AN LAS+H+RVP+
Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPV 103
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 60 bits (143), Expect = 3e-010
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +2
Query: 50 CNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPL 178
C CE A A LC AD+A+LC ACD +VH+AN LA +HQRVP+
Sbjct: 63 CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPI 105
>TAIR9_protein||AT5G15840.2 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171873-5172697 REVERSE
Length = 275
Score = 60 bits (143), Expect = 3e-010
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +2
Query: 50 CNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPL 178
C CE A A LC AD+A+LC ACD +VH+AN LA +HQRVP+
Sbjct: 63 CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPI 105
>TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 407
Score = 59 bits (142), Expect = 4e-010
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 50 CNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLS 181
C VCE A A+V C AD AALC CD +H+AN LA +H+RVP++
Sbjct: 93 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 136
Score = 56 bits (133), Expect = 4e-009
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Frame = +2
Query: 8 RERERQSVGDMKIQCNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRV 172
R RER+ + C+ C++A A + C D A LC +CD KVHAANKLAS+H RV
Sbjct: 39 RFRERKMASKL---CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARV 90
>TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2);
transcription factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 348
Score = 59 bits (141), Expect = 5e-010
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +2
Query: 50 CNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPL 178
C CE+A A LC AD A+LC ACD ++H+AN LA +HQRVP+
Sbjct: 59 CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPI 101
Score = 55 bits (131), Expect = 8e-009
Identities = 25/59 (42%), Positives = 34/59 (57%)
Frame = +2
Query: 11 ERERQSVGDMKIQCNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLSAS 187
+ E G C+ C +A V C AD A LC CD +VHAAN++AS+H+RV + S
Sbjct: 3 KEESNESGTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQS 61
>TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567621 FORWARD
Length = 221
Score = 59 bits (140), Expect = 7e-010
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 50 CNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLS 181
C VCE A A+V C AD AALC CD +H+AN L+ +H+RVP++
Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPIT 94
Score = 53 bits (126), Expect = 3e-008
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +2
Query: 50 CNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRV 172
C+ C++ A + C AD A LC CD K+H ANKLAS+H+RV
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERV 48
>TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567946 FORWARD
Length = 295
Score = 59 bits (140), Expect = 7e-010
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +2
Query: 50 CNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLS 181
C VCE A A+V C AD AALC CD +H+AN L+ +H+RVP++
Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPIT 94
Score = 53 bits (126), Expect = 3e-008
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +2
Query: 50 CNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRV 172
C+ C++ A + C AD A LC CD K+H ANKLAS+H+RV
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERV 48
>TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1);
transcription factor/ zinc ion binding | chr5:5176297-5177473 REVERSE
Length = 356
Score = 55 bits (132), Expect = 6e-009
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = +2
Query: 50 CNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPLSAS 187
C+ C +A V C AD A LC +CD +VHAAN+LAS+H+RV + S
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQS 57
Score = 55 bits (132), Expect = 6e-009
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +2
Query: 50 CNVCETAEANVLCCADEAALCWACDEKVHAANKLASKHQRVPL 178
C CE A A C AD A+LC CD ++H+AN LA +HQRVP+
Sbjct: 55 CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,884,545,436
Number of Sequences: 33410
Number of Extensions: 3884545436
Number of Successful Extensions: 217906452
Number of sequences better than 0.0: 0
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