BLASTX 7.6.2
Query= RU22544 /QuerySize=295
(294 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G06040.2 | Symbols: STO | STO (SALT TOLERANCE)... 159 3e-040
TAIR9_protein||AT1G06040.1 | Symbols: STO | STO (SALT TOLERANCE)... 159 3e-040
TAIR9_protein||AT2G31380.1 | Symbols: STH | STH; protein domain ... 158 8e-040
TAIR9_protein||AT1G78600.1 | Symbols: LZF1, STH3 | LZF1 (LIGHT-R... 122 5e-029
TAIR9_protein||AT4G10240.1 | Symbols: | zinc finger (B-box type... 112 6e-026
TAIR9_protein||AT1G75540.1 | Symbols: STH2 | STH2 (SALT TOLERANC... 111 1e-025
TAIR9_protein||AT4G39070.1 | Symbols: | zinc finger (B-box type... 101 9e-023
TAIR9_protein||AT2G21320.1 | Symbols: | zinc finger (B-box type... 91 9e-020
TAIR9_protein||AT4G38960.1 | Symbols: | zinc finger (B-box type... 89 3e-019
TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger... 65 9e-012
TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (const... 64 2e-011
TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONST... 61 1e-010
TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONST... 61 1e-010
TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like... 60 2e-010
TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger... 59 5e-010
TAIR9_protein||AT4G38960.2 | Symbols: | zinc finger (B-box type... 45 7e-006
>TAIR9_protein||AT1G06040.2 | Symbols: STO | STO (SALT TOLERANCE); DNA binding /
protein binding / transcription factor/ zinc ion binding |
chr1:1828957-1829659 REVERSE
Length = 178
Score = 159 bits (402), Expect = 3e-040
Identities = 72/83 (86%), Positives = 77/83 (92%)
Frame = -2
Query: 251 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLESLSNKLPRCDIC 72
MKIQCDVCEKAPATVICCADEAALC +CD+E+HAANKLASKHQRL L SLS K PRCDIC
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 71 QDKAAFIFCVEDRALFCQDCDES 3
Q+KAAFIFCVEDRAL C+DCDES
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDES 83
>TAIR9_protein||AT1G06040.1 | Symbols: STO | STO (SALT TOLERANCE); DNA binding /
protein binding / transcription factor/ zinc ion binding |
chr1:1828662-1829659 REVERSE
Length = 249
Score = 159 bits (402), Expect = 3e-040
Identities = 72/83 (86%), Positives = 77/83 (92%)
Frame = -2
Query: 251 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLESLSNKLPRCDIC 72
MKIQCDVCEKAPATVICCADEAALC +CD+E+HAANKLASKHQRL L SLS K PRCDIC
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 71 QDKAAFIFCVEDRALFCQDCDES 3
Q+KAAFIFCVEDRAL C+DCDES
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDES 83
>TAIR9_protein||AT2G31380.1 | Symbols: STH | STH; protein domain specific
binding / transcription factor/ zinc ion binding |
chr2:13382150-13383302 FORWARD
Length = 239
Score = 158 bits (398), Expect = 8e-040
Identities = 72/83 (86%), Positives = 77/83 (92%)
Frame = -2
Query: 251 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLESLSNKLPRCDIC 72
MKIQCDVCEKAPAT+ICCADEAALCAKCDVEVHAANKLASKHQRL L+SLS K P CDIC
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60
Query: 71 QDKAAFIFCVEDRALFCQDCDES 3
+KAAFIFCVEDRAL C+DCDE+
Sbjct: 61 LEKAAFIFCVEDRALLCRDCDEA 83
>TAIR9_protein||AT1G78600.1 | Symbols: LZF1, STH3 | LZF1 (LIGHT-REGULATED ZINC
FINGER PROTEIN 1); transcription factor/ zinc ion binding |
chr1:29567370-29568662 FORWARD
Length = 300
Score = 122 bits (305), Expect = 5e-029
Identities = 51/81 (62%), Positives = 66/81 (81%)
Frame = -2
Query: 251 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLESLSNKLPRCDIC 72
MKIQC+VCE A ATV+CCADEAALC CD ++HAANKLA KHQR+ L + ++ +P+CDIC
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60
Query: 71 QDKAAFIFCVEDRALFCQDCD 9
Q+ + F FC++DRAL C+ CD
Sbjct: 61 QEASGFFFCLQDRALLCRKCD 81
Score = 54 bits (127), Expect = 2e-008
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = -2
Query: 242 QCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLESLSNKLPRCD 78
+CD+C++A C D A LC KCDV +H N S HQR LL + L D
Sbjct: 56 KCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESID 110
>TAIR9_protein||AT4G10240.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:6368967-6369526 REVERSE
Length = 163
Score = 112 bits (278), Expect = 6e-026
Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 6/89 (6%)
Frame = -2
Query: 251 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLE------SLSNKL 90
MKIQC+VCEKA A V+CC+DEA LC CD++VH ANKL +H R+ L+ + ++
Sbjct: 1 MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60
Query: 89 PRCDICQDKAAFIFCVEDRALFCQDCDES 3
P CDICQ++ + FC+EDRA+ C DCDE+
Sbjct: 61 PLCDICQERKGYFFCLEDRAMLCNDCDEA 89
>TAIR9_protein||AT1G75540.1 | Symbols: STH2 | STH2 (SALT TOLERANCE HOMOLOG2);
transcription factor/ zinc ion binding | chr1:28366059-28367398
FORWARD
Length = 332
Score = 111 bits (275), Expect = 1e-025
Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 3/86 (3%)
Frame = -2
Query: 251 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQR--LLLESLSN-KLPRC 81
MKI+CDVC+K A+V C ADEA+LC CD +VH ANKLASKH R LL S SN P C
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 80 DICQDKAAFIFCVEDRALFCQDCDES 3
DICQDK A +FC +DRA+ C+DCD S
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSS 86
Score = 50 bits (117), Expect = 3e-007
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = -2
Query: 239 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLL 111
CD+C+ A + C D A LC CD +HAAN+ KH R LL
Sbjct: 60 CDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLL 102
>TAIR9_protein||AT4G39070.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:18205061-18206421 REVERSE
Length = 243
Score = 101 bits (251), Expect = 9e-023
Identities = 48/82 (58%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = -2
Query: 251 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLESLSNK-LPRCDI 75
MKI C VC+K A+V CCADEAALC CD VH ANKLA KH R L S + K P CDI
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 74 CQDKAAFIFCVEDRALFCQDCD 9
C ++ A +FC EDRA+ C++CD
Sbjct: 61 CGERRALLFCQEDRAILCRECD 82
>TAIR9_protein||AT2G21320.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:9126502-9127652 FORWARD
Length = 173
Score = 91 bits (225), Expect = 9e-020
Identities = 43/81 (53%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = -2
Query: 251 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLESLSNKLPRCDIC 72
M+I CD CE A A V C ADEAALC CD +VH NKLAS+H R+ L SN P CDIC
Sbjct: 1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSN-APSCDIC 59
Query: 71 QDKAAFIFCVEDRALFCQDCD 9
++ AF +C D + C CD
Sbjct: 60 ENAPAFFYCEIDGSSLCLQCD 80
>TAIR9_protein||AT4G38960.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:18161576-18163045 FORWARD
Length = 184
Score = 89 bits (220), Expect = 3e-019
Identities = 42/81 (51%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = -2
Query: 251 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLESLSNKLPRCDIC 72
M+I CD CE A A + C ADEAALC CD +VH NKLAS+H R+ L SN P CDIC
Sbjct: 1 MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSN-APCCDIC 59
Query: 71 QDKAAFIFCVEDRALFCQDCD 9
++ AF +C D + C CD
Sbjct: 60 ENAPAFFYCEIDGSSLCLQCD 80
>TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type)
family protein | chr5:23355573-23356729 FORWARD
Length = 356
Score = 65 bits (156), Expect = 9e-012
Identities = 26/45 (57%), Positives = 36/45 (80%)
Frame = -2
Query: 239 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLES 105
C+VCE+APA V C AD AALC CD ++H+AN LAS+H+R+ +E+
Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVET 105
>TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1);
transcription factor/ zinc ion binding | chr5:5176297-5177473 REVERSE
Length = 356
Score = 64 bits (153), Expect = 2e-011
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -2
Query: 239 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLESLSNKLPRCDICQDKA 60
CD C A TV C AD A LC+ CD +VHAAN+LAS+H+R+ + + P C+ A
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADA 71
Query: 59 A 57
A
Sbjct: 72 A 72
>TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567621 FORWARD
Length = 221
Score = 61 bits (146), Expect = 1e-010
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = -2
Query: 239 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLESLSNKLPRCDICQDKA 60
CD C+ AT+ C AD A LC CD ++H ANKLAS+H+R+ L + + P C+ A
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADA 67
Query: 59 AFIFCVEDR 33
A + DR
Sbjct: 68 AALCVTCDR 76
Score = 58 bits (138), Expect = 1e-009
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -2
Query: 239 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRL 117
C+VCE+APA V C AD AALC CD ++H+AN L+ +H+R+
Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERV 91
>TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567946 FORWARD
Length = 295
Score = 61 bits (146), Expect = 1e-010
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = -2
Query: 239 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLESLSNKLPRCDICQDKA 60
CD C+ AT+ C AD A LC CD ++H ANKLAS+H+R+ L + + P C+ A
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADA 67
Query: 59 AFIFCVEDR 33
A + DR
Sbjct: 68 AALCVTCDR 76
Score = 58 bits (138), Expect = 1e-009
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -2
Query: 239 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRL 117
C+VCE+APA V C AD AALC CD ++H+AN L+ +H+R+
Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERV 91
>TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2);
transcription factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 348
Score = 60 bits (145), Expect = 2e-010
Identities = 27/61 (44%), Positives = 35/61 (57%)
Frame = -2
Query: 239 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLESLSNKLPRCDICQDKA 60
CD C A TV C AD A LC CD VHAAN++AS+H+R+ + P +C+ A
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADA 75
Query: 59 A 57
A
Sbjct: 76 A 76
>TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 407
Score = 59 bits (141), Expect = 5e-010
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = -2
Query: 239 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRL 117
C+VCE+APA V C AD AALC CD ++H+AN LA +H+R+
Sbjct: 93 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERV 133
Score = 59 bits (140), Expect = 6e-010
Identities = 29/69 (42%), Positives = 39/69 (56%)
Frame = -2
Query: 239 CDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLESLSNKLPRCDICQDKA 60
CD C+ A A + C D A LC CD +VHAANKLAS+H R+ + + + P C+ A
Sbjct: 50 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADA 109
Query: 59 AFIFCVEDR 33
A + DR
Sbjct: 110 AALCVTCDR 118
>TAIR9_protein||AT4G38960.2 | Symbols: | zinc finger (B-box type) family
protein | chr4:18162300-18163045 FORWARD
Length = 151
Score = 45 bits (105), Expect = 7e-006
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -2
Query: 146 NKLASKHQRLLLESLSNKLPRCDICQDKAAFIFCVEDRALFCQDCD 9
NKLAS+H R+ L SN P CDIC++ AF +C D + C CD
Sbjct: 3 NKLASRHVRVGLAEPSN-APCCDICENAPAFFYCEIDGSSLCLQCD 47
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,913,704,617
Number of Sequences: 33410
Number of Extensions: 3913704617
Number of Successful Extensions: 217960510
Number of sequences better than 0.0: 0
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