BLASTX 7.6.2
Query= RU22637 /QuerySize=580
(579 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G55160.1 | Symbols: SUM2, SUMO 2, SUMO2, ATSUM... 168 2e-042
TAIR9_protein||AT4G26840.1 | Symbols: SUM1, SUMO 1, SUMO1, ATSUM... 165 2e-041
TAIR9_protein||AT5G55160.2 | Symbols: SUM2, SUMO 2, SUMO2, ATSUM... 131 5e-031
TAIR9_protein||AT5G55170.1 | Symbols: SUM3, SUMO 3, SUMO3, ATSUM... 96 1e-020
TAIR9_protein||AT5G55856.1 | Symbols: | FUNCTIONS IN: molecular... 92 2e-019
TAIR9_protein||AT5G48710.1 | Symbols: | ubiquitin-related | chr... 83 9e-017
TAIR9_protein||AT5G48700.1 | Symbols: | ubiquitin-related | chr... 75 3e-014
TAIR9_protein||AT2G32765.1 | Symbols: SUM5, SUMO5, ATSUMO5 | SUM... 66 2e-011
>TAIR9_protein||AT5G55160.1 | Symbols: SUM2, SUMO 2, SUMO2, ATSUMO2 | SUMO2
(SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag |
chr5:22383747-22384772 REVERSE
Length = 104
Score = 168 bits (425), Expect = 2e-042
Identities = 84/95 (88%), Positives = 87/95 (91%), Gaps = 1/95 (1%)
Frame = -1
Query: 486 SLPPEEDKKPNDQGAHINLKVKGQDGNQVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFL 307
S PEEDKKP DQGAHINLKVKGQDGN+VFFRIKRSTQLKKLMNAYCDRQSV+ NSIAFL
Sbjct: 2 SATPEEDKKP-DQGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFL 60
Query: 306 FDGRRLRVYFTPDELEMEDGDEIDAMLHQTGGAAQ 202
FDGRRLR TPDELEMEDGDEIDAMLHQTGG A+
Sbjct: 61 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGGAK 95
>TAIR9_protein||AT4G26840.1 | Symbols: SUM1, SUMO 1, SUMO1, ATSUMO1 | SUMO1
(SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag |
chr4:13497466-13498458 FORWARD
Length = 101
Score = 165 bits (416), Expect = 2e-041
Identities = 79/89 (88%), Positives = 84/89 (94%)
Frame = -1
Query: 474 EEDKKPNDQGAHINLKVKGQDGNQVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGR 295
EEDKKP D GAHINLKVKGQDGN+VFFRIKRSTQLKKLMNAYCDRQSV++NSIAFLFDGR
Sbjct: 6 EEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGR 65
Query: 294 RLRVYFTPDELEMEDGDEIDAMLHQTGGA 208
RLR TPDEL+MEDGDEIDAMLHQTGG+
Sbjct: 66 RLRAEQTPDELDMEDGDEIDAMLHQTGGS 94
>TAIR9_protein||AT5G55160.2 | Symbols: SUM2, SUMO 2, SUMO2, ATSUMO2 | SUMO2
(SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag |
chr5:22383747-22384772 REVERSE
Length = 117
Score = 131 bits (327), Expect = 5e-031
Identities = 63/71 (88%), Positives = 66/71 (92%)
Frame = -1
Query: 414 DGNQVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRVYFTPDELEMEDGDEID 235
DGN+VFFRIKRSTQLKKLMNAYCDRQSV+ NSIAFLFDGRRLR TPDELEMEDGDEID
Sbjct: 38 DGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGRRLRAEQTPDELEMEDGDEID 97
Query: 234 AMLHQTGGAAQ 202
AMLHQTGG A+
Sbjct: 98 AMLHQTGGGAK 108
>TAIR9_protein||AT5G55170.1 | Symbols: SUM3, SUMO 3, SUMO3, ATSUMO3 | SUMO3
(SMALL UBIQUITIN-LIKE MODIFIER 3); protein binding / protein tag |
chr5:22385468-22386071 REVERSE
Length = 112
Score = 96 bits (238), Expect = 1e-020
Identities = 47/90 (52%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Frame = -1
Query: 477 PEEDKK-PNDQGAHINLKVKGQDGNQVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFD 301
P++DK +Q AH+ LKVK QDG++V F+ K+S LKKLM YCDR+ ++L++ AF+F+
Sbjct: 4 PQDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFN 63
Query: 300 GRRLRVYFTPDELEMEDGDEIDAMLHQTGG 211
G R+ TPDEL+MEDGD IDA +GG
Sbjct: 64 GARIGGLETPDELDMEDGDVIDACRAMSGG 93
>TAIR9_protein||AT5G55856.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: protein modification process; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin
(InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: SUMO1
(SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag
(TAIR:AT4G26840.1); Has 781 Blast hits to 780 proteins in 173 species:
Archae - 0; Bacteria - 0; Metazoa - 477; Fungi - 93; Plants - 124;
Viruses - 1; Other Eukaryotes - 86 (source: NCBI BLink). |
chr5:22607927-22608640 FORWARD
Length = 98
Score = 92 bits (228), Expect = 2e-019
Identities = 44/86 (51%), Positives = 62/86 (72%)
Frame = -1
Query: 468 DKKPNDQGAHINLKVKGQDGNQVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRL 289
DKKP +HI +KVK QD V+FRIKR +L+K+M+AY D+ VE++++ FLFDG R+
Sbjct: 5 DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64
Query: 288 RVYFTPDELEMEDGDEIDAMLHQTGG 211
++ TP+EL +ED DEI+A Q GG
Sbjct: 65 KLNQTPNELGLEDEDEIEAFGEQLGG 90
>TAIR9_protein||AT5G48710.1 | Symbols: | ubiquitin-related |
chr5:19755065-19755572 REVERSE
Length = 115
Score = 83 bits (204), Expect = 9e-017
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = -1
Query: 471 EDKKPNDQGAHINLKVKGQDGNQV-FFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGR 295
+ +K H+ LKVKGQD F ++R+ +L K+M Y + +E N+ FLFDG
Sbjct: 17 QKRKVVSDPTHVTLKVKGQDEEDFRVFWVRRNAKLLKMMELYTKMRGIEWNTFRFLFDGS 76
Query: 294 RLRVYFTPDELEMEDGDEIDAMLHQTGG 211
R+R Y TPDELE +DGDEIDAML Q G
Sbjct: 77 RIREYHTPDELERKDGDEIDAMLCQQSG 104
>TAIR9_protein||AT5G48700.1 | Symbols: | ubiquitin-related |
chr5:19749494-19750013 REVERSE
Length = 118
Score = 75 bits (183), Expect = 3e-014
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = -1
Query: 474 EEDKKPNDQGAHINLKVKGQDGNQV-FFRIKRSTQLKKLMNAYCDRQSVELNSIAFLF-D 301
E+ K + H+ L VKGQD V FR++R +L KLM Y + +E N+ FL D
Sbjct: 19 EKRKDVESESTHVTLNVKGQDEEGVKVFRVRRKARLLKLMEYYAKMRGIEWNTFRFLSDD 78
Query: 300 GRRLRVYFTPDELEMEDGDEIDAMLHQTGG 211
G R+R Y T D++E++DGD+IDA+L Q G
Sbjct: 79 GSRIREYHTADDMELKDGDQIDALLPQESG 108
>TAIR9_protein||AT2G32765.1 | Symbols: SUM5, SUMO5, ATSUMO5 | SUMO5 (SMALL
UBIQUITINRELATED MODIFIER 5); protein tag | chr2:13894968-13895399
FORWARD
Length = 109
Score = 66 bits (159), Expect = 2e-011
Identities = 29/76 (38%), Positives = 50/76 (65%)
Frame = -1
Query: 438 INLKVKGQDGNQVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLFDGRRLRVYFTPDELE 259
+ LKVK Q G + ++I LKKLM+AYC +++++ +S+ F+++GR ++ TP +L
Sbjct: 28 VTLKVKNQQGAEDLYKIGTHAHLKKLMSAYCTKRNLDYSSVRFVYNGREIKARQTPAQLH 87
Query: 258 MEDGDEIDAMLHQTGG 211
ME+ DEI ++ GG
Sbjct: 88 MEEEDEICMVMELGGG 103
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,913,704,617
Number of Sequences: 33410
Number of Extensions: 3913704617
Number of Successful Extensions: 217960510
Number of sequences better than 0.0: 0
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