BLASTX 7.6.2
Query= RU22704 /QuerySize=1038
(1037 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G65650.1 | Symbols: UCH2 | UCH2; ubiquitin thi... 481 3e-136
TAIR9_protein||AT5G16310.1 | Symbols: UCH1 | UCH1; ubiquitin thi... 440 7e-124
TAIR9_protein||AT4G17510.1 | Symbols: UCH3 | UCH3 (UBIQUITIN C-T... 72 5e-013
>TAIR9_protein||AT1G65650.1 | Symbols: UCH2 | UCH2; ubiquitin thiolesterase/
ubiquitin-specific protease | chr1:24415172-24417466 REVERSE
Length = 331
Score = 481 bits (1238), Expect = 3e-136
Identities = 240/306 (78%), Positives = 272/306 (88%), Gaps = 6/306 (1%)
Frame = -3
Query: 954 MSWCTIDSDPGVFTELIQQMQVKGVQVEELYSLDIDSLNSLRPVYGLIFLFKWRPGEKDD 775
MSWCTI+SDPGVFTELIQQMQVKGVQVEELYSLD DSLN+LRPVYGLIFLFKW+ GEKD+
Sbjct: 1 MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDSDSLNNLRPVYGLIFLFKWQAGEKDE 60
Query: 774 RLVIKDPNPNLFFASQVINNACATQAILSILLNCPDVDIGPELSKLKEFTKNFPPELKGL 595
R I+D NLFFA+QVINNACATQAIL+ILLN P+VDIGPELS LKEFTKNFP +LKGL
Sbjct: 61 RPTIQDQVSNLFFANQVINNACATQAILAILLNSPEVDIGPELSALKEFTKNFPSDLKGL 120
Query: 594 AINNSEAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYLPVDGVLYELDGLKEGPIS 415
AINNS++IRAAHNSFARPEPFVPEEQKAA KDDDVYHFISY+PVDGVLYELDGLKEGPIS
Sbjct: 121 AINNSDSIRAAHNSFARPEPFVPEEQKAATKDDDVYHFISYIPVDGVLYELDGLKEGPIS 180
Query: 414 LGQCPGGQGDMEWLQMVQPVIQERIERYSKSEIRFNLLAIIIKNRKEMYTVELKELQKKR 235
LG CPG Q +EWLQMVQPVIQERIERYS+SEIRFNLLA +IKNRK++YT ELKELQ++R
Sbjct: 181 LGPCPGDQTGIEWLQMVQPVIQERIERYSQSEIRFNLLA-VIKNRKDIYTAELKELQRQR 239
Query: 234 ERISQQLSILQSERPDDGSKFQALNKALSEVNAGIEGATEKILVEEEKFKKWRTENIRRK 55
E++ QQ + D S+ +A+N ++EV +GIE A++KI++EEEKF KWRTENIRRK
Sbjct: 240 EQLLQQANTCV-----DKSEAEAVNALIAEVGSGIEAASDKIVMEEEKFMKWRTENIRRK 294
Query: 54 HNYIPF 37
HNYIPF
Sbjct: 295 HNYIPF 300
>TAIR9_protein||AT5G16310.1 | Symbols: UCH1 | UCH1; ubiquitin thiolesterase |
chr5:5342579-5344153 REVERSE
Length = 335
Score = 440 bits (1131), Expect = 7e-124
Identities = 212/312 (67%), Positives = 265/312 (84%), Gaps = 7/312 (2%)
Frame = -3
Query: 954 MSWCTIDSDPGVFTELIQQMQVKGVQVEELYSLDIDSLNSLRPVYGLIFLFKWRPGEKDD 775
MSW ++SDPG+FTE+IQQMQVKGVQVEELYSLD +SL+ +RPVYGLI L+KWRP EK++
Sbjct: 1 MSWLPVESDPGIFTEIIQQMQVKGVQVEELYSLDFNSLDEIRPVYGLILLYKWRPEEKEN 60
Query: 774 RLVIKDPNPNLFFASQVINNACATQAILSILLNCPDVDIGPELSKLKEFTKNFPPELKGL 595
R+VI +PNPN FFASQ+INNACATQAILS+L+N +DIG ELS+LK+F K FPPELKGL
Sbjct: 61 RVVITEPNPNFFFASQIINNACATQAILSVLMNSSSIDIGSELSELKQFAKEFPPELKGL 120
Query: 594 AINNSEAIRAAHNSFARPEP--FVPEEQKAAGK----DDDVYHFISYLPVDGVLYELDGL 433
AINN+EAIRAAHN+FARP+P + +E+ AA K DDDVYH+ISYLPVDG+LYELDGL
Sbjct: 121 AINNNEAIRAAHNTFARPDPSSIMEDEELAAAKNLDEDDDVYHYISYLPVDGILYELDGL 180
Query: 432 KEGPISLGQCPGGQGDMEWLQMVQPVIQERIERYSKSEIRFNLLAIIIKNRKEMYTVELK 253
KEGPISLGQC G +EWL+MVQPV+QE+I+RYS++EIRF+LLA ++KNRKEMY ELK
Sbjct: 181 KEGPISLGQCLGEPEGIEWLRMVQPVVQEQIDRYSQNEIRFSLLA-VVKNRKEMYVAELK 239
Query: 252 ELQKKRERISQQLSILQSERPDDGSKFQALNKALSEVNAGIEGATEKILVEEEKFKKWRT 73
E Q+KRER+ QQL LQ+++ + S ++AL++ LSEVN GIE ++KI++EEEK K W+
Sbjct: 240 EYQRKRERVLQQLGALQADKYAEKSSYEALDRELSEVNIGIETVSQKIVMEEEKSKNWKK 299
Query: 72 ENIRRKHNYIPF 37
EN+RRKHNY+PF
Sbjct: 300 ENMRRKHNYVPF 311
>TAIR9_protein||AT4G17510.1 | Symbols: UCH3 | UCH3 (UBIQUITIN C-TERMINAL
HYDROLASE 3); ubiquitin thiolesterase | chr4:9767114-9768648 REVERSE
Length = 235
Score = 72 bits (175), Expect = 5e-013
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Frame = -3
Query: 948 WCTIDSDPGVFTELIQQMQVKGVQVE--ELYSLDIDSLNSL-RPVYGLIFLFKWRPGEKD 778
W ++S+P V + + + + + E ++Y LD + L + +PV ++FL+ ++
Sbjct: 13 WLPLESNPDVMNQYLWGLGLAPDEAECNDVYGLDDELLEMVPKPVLAVLFLYPITKKSEE 72
Query: 777 DRL----VIKDP--NPNLFFASQVINNACATQAILSILLNCPD---VDIGPELSKLKEFT 625
+R+ IK+ + ++F Q + NAC T +L + N + G L + + T
Sbjct: 73 ERIEQDKEIKEKVHSDKVYFMKQTVGNACGTIGLLHAIGNITSEIKLSDGSFLDRFFKST 132
Query: 624 KNFPPELKGLAINNSEAIRAAHNSFARPEPFVPEEQKAAGKDDDVYHFISYLPVDGVLYE 445
N P + + N I AH+ V A +D D HFI V+G LYE
Sbjct: 133 ANMTPMERAKFLENDSQIEDAHS------VAVIAGDTPASEDADT-HFICLACVEGELYE 185
Query: 444 LDGLKEGPISLGQCPGGQGDMEWLQMVQPVIQERIERYSKSEIRFNLLAI 295
LDG K GPIS G L+ VI++ IE+ + + FNL+AI
Sbjct: 186 LDGRKAGPIS----HGASSPATLLKDATKVIKKMIEK-NPGSLNFNLIAI 230
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,913,704,617
Number of Sequences: 33410
Number of Extensions: 3913704617
Number of Successful Extensions: 217960510
Number of sequences better than 0.0: 0
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