BLASTX 7.6.2
Query= RU22805 /QuerySize=657
(656 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA... 198 4e-051
TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA... 196 9e-051
TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A);... 165 3e-041
TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTA... 163 9e-041
TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding... 162 2e-040
TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding... 162 3e-040
TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |... 142 3e-034
TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding... 135 3e-032
TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7... 134 4e-032
TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 94 6e-020
TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 94 6e-020
TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 94 6e-020
TAIR9_protein||AT1G52740.1 | Symbols: HTA9 | HTA9 (HISTONE H2A P... 93 1e-019
TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding... 92 3e-019
TAIR9_protein||AT4G13570.1 | Symbols: HTA4 | HTA4; DNA binding |... 52 2e-007
>TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA-H2AX | H2AXA;
DNA binding | chr1:2847144-2847676 REVERSE
Length = 143
Score = 198 bits (501), Expect = 4e-051
Identities = 103/125 (82%)
Frame = -1
Query: 497 ATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAA 318
ATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAP GNAA
Sbjct: 19 ATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAA 78
Query: 317 RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSA 138
RDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP KVGK KGDIGSA
Sbjct: 79 RDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKNKGDIGSA 138
Query: 137 SQEF* 123
SQEF*
Sbjct: 139 SQEF* 143
>TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX |
GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX); DNA binding |
chr1:20414607-20415206 REVERSE
Length = 143
Score = 196 bits (498), Expect = 9e-051
Identities = 102/125 (81%), Positives = 103/125 (82%)
Frame = -1
Query: 497 ATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAA 318
ATKSVSRSSKAGLQFPVGRIARFLK+GKYAERVGAGAP GNAA
Sbjct: 19 ATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAA 78
Query: 317 RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSA 138
RDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP KVGK KGDIGSA
Sbjct: 79 RDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKVGKNKGDIGSA 138
Query: 137 SQEF* 123
SQEF*
Sbjct: 139 SQEF* 143
>TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A); DNA binding |
chr4:13637515-13638325 REVERSE
Length = 132
Score = 165 bits (416), Expect = 3e-041
Identities = 85/114 (74%), Positives = 87/114 (76%)
Frame = -1
Query: 497 ATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAA 318
A KS SRSSKAGLQFPVGRIARFLK+GKYAERVGAGAP GNAA
Sbjct: 13 AKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAA 72
Query: 317 RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 156
RDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K
Sbjct: 73 RDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK 126
>TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTANT TO
AGROBACTERIUM TRANSFORMATION 5); DNA binding | chr5:22196540-22197279
FORWARD
Length = 131
Score = 163 bits (412), Expect = 9e-041
Identities = 84/114 (73%), Positives = 87/114 (76%)
Frame = -1
Query: 497 ATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAA 318
A K+ SRSSKAGLQFPVGRIARFLK+GKYAERVGAGAP GNAA
Sbjct: 13 AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAA 72
Query: 317 RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 156
RDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K
Sbjct: 73 RDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGASK 126
>TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding |
chr3:7229472-7229963 FORWARD
Length = 133
Score = 162 bits (409), Expect = 2e-040
Identities = 84/114 (73%), Positives = 86/114 (75%)
Frame = -1
Query: 497 ATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAA 318
A KS SRSSKAGLQFPVGRIARFLK+GKYA RVGAGAP GNAA
Sbjct: 13 AKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAA 72
Query: 317 RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 156
RDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K
Sbjct: 73 RDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASK 126
>TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding |
chr1:18926948-18927443 FORWARD
Length = 133
Score = 162 bits (408), Expect = 3e-040
Identities = 83/114 (72%), Positives = 86/114 (75%)
Frame = -1
Query: 497 ATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAA 318
A K+ +RSSKAGLQFPVGRIARFLK GKYAERVGAGAP GNAA
Sbjct: 13 AKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAA 72
Query: 317 RDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 156
RDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K
Sbjct: 73 RDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASK 126
>TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |
chr5:24115605-24116144 REVERSE
Length = 151
Score = 142 bits (356), Expect = 3e-034
Identities = 70/108 (64%), Positives = 80/108 (74%)
Frame = -1
Query: 494 TKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAAR 315
TKSVS+S KAGLQFPVGRI RFLK G+YA+R+G GAP GNAAR
Sbjct: 22 TKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAAR 81
Query: 314 DNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 171
DNKK+RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLPKK
Sbjct: 82 DNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKK 129
>TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding |
chr5:575437-576456 FORWARD
Length = 154
Score = 135 bits (339), Expect = 3e-032
Identities = 69/110 (62%), Positives = 78/110 (70%)
Frame = -1
Query: 491 KSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARD 312
K VSRS K+GLQFPVGRI R+LK G+Y++RVG GAP GNAARD
Sbjct: 23 KPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARD 82
Query: 311 NKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 162
NKKNRI+PRH+ LAVRNDEEL LL VTIA+GGVLPNI+ LLPKK K
Sbjct: 83 NKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEK 132
>TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7); DNA binding
| chr5:9792807-9793365 REVERSE
Length = 151
Score = 134 bits (337), Expect = 4e-032
Identities = 69/107 (64%), Positives = 78/107 (72%)
Frame = -1
Query: 491 KSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARD 312
KSVS+S KAGLQFPVGRIAR+LK G+YA R G+GAP GNAARD
Sbjct: 24 KSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARD 83
Query: 311 NKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 171
NKKNRI PRH+ LA+RNDEEL +LL VTIA+GGVLPNI+ LLPKK
Sbjct: 84 NKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKK 130
>TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 94 bits (232), Expect = 6e-020
Identities = 54/107 (50%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Frame = -1
Query: 491 KSVSRSSKAGLQFPVGRIARFLKSGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAAR 315
KS+SRSS+AG+QFPVGRI R LK A RVGA A GNA++
Sbjct: 27 KSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
Query: 314 DNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 174
D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K
Sbjct: 87 DLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNK 132
>TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 94 bits (232), Expect = 6e-020
Identities = 54/107 (50%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Frame = -1
Query: 491 KSVSRSSKAGLQFPVGRIARFLKSGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAAR 315
KS+SRSS+AG+QFPVGRI R LK A RVGA A GNA++
Sbjct: 27 KSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
Query: 314 DNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 174
D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K
Sbjct: 87 DLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNK 132
>TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 94 bits (232), Expect = 6e-020
Identities = 54/107 (50%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Frame = -1
Query: 491 KSVSRSSKAGLQFPVGRIARFLKSGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAAR 315
KS+SRSS+AG+QFPVGRI R LK A RVGA A GNA++
Sbjct: 27 KSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
Query: 314 DNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 174
D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K
Sbjct: 87 DLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLVNK 132
>TAIR9_protein||AT1G52740.1 | Symbols: HTA9 | HTA9 (HISTONE H2A PROTEIN 9); DNA
binding | chr1:19645409-19646221 FORWARD
Length = 135
Score = 93 bits (230), Expect = 1e-019
Identities = 52/107 (48%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Frame = -1
Query: 491 KSVSRSSKAGLQFPVGRIARFLKSGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAAR 315
K ++RSS+AGLQFPVGR+ R LK+ A RVGA A GNA++
Sbjct: 25 KPITRSSRAGLQFPVGRVHRLLKTRSTAHGRVGATAAVYTAAILEYLTAEVLELAGNASK 84
Query: 314 DNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 174
D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K
Sbjct: 85 DLKVKRISPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 130
>TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding |
chr3:20196532-20197466 FORWARD
Length = 137
Score = 92 bits (226), Expect = 3e-019
Identities = 52/107 (48%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Frame = -1
Query: 491 KSVSRSSKAGLQFPVGRIARFLKSGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAAR 315
K +SRS++AG+QFPVGRI R LK+ A RVGA A GNA++
Sbjct: 27 KPISRSARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
Query: 314 DNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 174
D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K
Sbjct: 87 DLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 132
>TAIR9_protein||AT4G13570.1 | Symbols: HTA4 | HTA4; DNA binding |
chr4:7884516-7885664 FORWARD
Length = 119
Score = 52 bits (124), Expect = 2e-007
Identities = 35/92 (38%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = -1
Query: 464 GLQFPVGRIARFLKSGKYA-ERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVP 288
G F V RI + LK+ A VGA N ++D K RI P
Sbjct: 28 GEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITP 87
Query: 287 RHIQLAVRNDEELSKLLGSVTIANGGVLPNIH 192
RH+QLA+R DEEL L+ TI G V+P+IH
Sbjct: 88 RHLQLAIRGDEELDTLIKG-TIIGGSVIPHIH 118
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,942,731,433
Number of Sequences: 33410
Number of Extensions: 3942731433
Number of Successful Extensions: 218000532
Number of sequences better than 0.0: 0
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