BLASTX 7.6.2
Query= RU22989 /QuerySize=553
(552 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcri... 176 1e-044
TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription... 172 1e-043
TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SC... 171 3e-043
TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription... 168 3e-042
TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription... 161 4e-040
TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription... 161 4e-040
TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription... 161 4e-040
TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcri... 159 1e-039
TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); ... 94 4e-020
TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIK... 90 9e-019
TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a... 89 1e-018
TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a... 89 1e-018
TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-L... 86 1e-017
TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELL... 86 1e-017
TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcri... 86 1e-017
TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROT... 85 3e-017
TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription... 84 4e-017
TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE... 84 4e-017
TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-l... 84 5e-017
TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSO... 81 3e-016
TAIR9_protein||AT3G49950.1 | Symbols: | scarecrow transcription... 62 3e-010
TAIR9_protein||AT1G63100.1 | Symbols: | scarecrow transcription... 59 2e-009
TAIR9_protein||AT4G37650.1 | Symbols: SHR, SGR7 | SHR (SHORT ROO... 55 2e-008
>TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcription factor 9
(SCL9) | chr2:15792623-15794779 FORWARD
Length = 719
Score = 176 bits (444), Expect = 1e-044
Identities = 80/132 (60%), Positives = 101/132 (76%), Gaps = 3/132 (2%)
Frame = -3
Query: 544 GHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLER 365
G NAPFF+TRFREAL HF S+FDMLE + REDE+R+ E E++GR+ LNV+ACEG ER
Sbjct: 585 GAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWER 644
Query: 364 VERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMR-YHNDFRVDEDGHWMLQGWK 188
VERPETY+QW VR +R+G Q+P D ++K ++ KV YH DF +D+D W+LQGWK
Sbjct: 645 VERPETYKQWHVRAMRSGLVQVPFDPSIMK--TSLHKVHTFYHKDFVIDQDNRWLLQGWK 702
Query: 187 GRTIMALSFWKP 152
GRT+MALS WKP
Sbjct: 703 GRTVMALSVWKP 714
>TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription factor family
protein | chr2:12481991-12486941 FORWARD
Length = 1337
Score = 172 bits (435), Expect = 1e-043
Identities = 76/131 (58%), Positives = 101/131 (77%)
Frame = -3
Query: 544 GHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLER 365
G NAPFF+TRFRE L H+ SLFDM + ++RED RVMFE+E YGR+I+NVVACEG ER
Sbjct: 563 GSYNAPFFVTRFREVLFHYSSLFDMCDTNLTREDPMRVMFEKEFYGREIMNVVACEGTER 622
Query: 364 VERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGWKG 185
VERPE+Y+QWQ R +RAGF+Q+PL+++L++++K M + +F VD+D HW+LQGWKG
Sbjct: 623 VERPESYKQWQARAMRAGFRQIPLEKELVQKLKLMVESGYKPKEFDVDQDCHWLLQGWKG 682
Query: 184 RTIMALSFWKP 152
R + S W P
Sbjct: 683 RIVYGSSIWVP 693
Score = 164 bits (413), Expect = 5e-041
Identities = 72/133 (54%), Positives = 99/133 (74%)
Frame = -3
Query: 544 GHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLER 365
G NAPFF++RF+EA+ H+ +LFDM + T+ R++++R+ FE+E YGR+ +NV+ACE +R
Sbjct: 1205 GSFNAPFFISRFKEAVYHYSALFDMFDSTLPRDNKERIRFEREFYGREAMNVIACEEADR 1264
Query: 364 VERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGWKG 185
VERPETYRQWQVR +RAGFKQ + +L++ + K RYH DF VDE+ W+LQGWKG
Sbjct: 1265 VERPETYRQWQVRMVRAGFKQKTIKPELVELFRGKLKKWRYHKDFVVDENSKWLLQGWKG 1324
Query: 184 RTIMALSFWKPT* 146
RT+ A S W P *
Sbjct: 1325 RTLYASSCWVPA* 1337
>TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14
(SCARECROW-LIKE 14); transcription factor | chr1:2313828-2316137
REVERSE
Length = 770
Score = 171 bits (432), Expect = 3e-043
Identities = 76/132 (57%), Positives = 106/132 (80%), Gaps = 1/132 (0%)
Frame = -3
Query: 544 GHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLER 365
G+ NAPFF+TRFREAL H+ ++FDM + ++REDE R+M+E+E YGR+I+NVVACEG ER
Sbjct: 637 GNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTER 696
Query: 364 VERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGWKG 185
VERPETY+QWQ R +RAGF+QLPL+++L++ +K + Y +F VD++G+W+LQGWKG
Sbjct: 697 VERPETYKQWQARLIRAGFRQLPLEKELMQNLK-LKIENGYDKNFDVDQNGNWLLQGWKG 755
Query: 184 RTIMALSFWKPT 149
R + A S W P+
Sbjct: 756 RIVYASSLWVPS 767
>TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription factor family
protein | chr1:2309718-2311805 REVERSE
Length = 696
Score = 168 bits (424), Expect = 3e-042
Identities = 72/133 (54%), Positives = 100/133 (75%)
Frame = -3
Query: 544 GHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLER 365
G NAPFF TRF+EAL H+ +LFD+ T+S+E+ +R+ FE E YGR+++NV+ACEG++R
Sbjct: 564 GSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDR 623
Query: 364 VERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGWKG 185
VERPETY+QWQVR +RAGFKQ P++ +L++ + K YH DF +DED +W LQGWKG
Sbjct: 624 VERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKG 683
Query: 184 RTIMALSFWKPT* 146
R + + S W P+*
Sbjct: 684 RILFSSSCWVPS* 696
>TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription factor family
protein | chr3:17158048-17159799 FORWARD
Length = 584
Score = 161 bits (405), Expect = 4e-040
Identities = 75/131 (57%), Positives = 95/131 (72%), Gaps = 1/131 (0%)
Frame = -3
Query: 544 GHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLER 365
G N+PFFLTRFREAL H SLFDM E T+S +D R + E+E+ RD ++V+ACEG ER
Sbjct: 451 GTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSER 510
Query: 364 VERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGWKG 185
RPETY+QWQVR LRAGF+ L ++++K+ K + K RYH DF +D D HWM QGWKG
Sbjct: 511 FARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVK-ERYHKDFVIDNDNHWMFQGWKG 569
Query: 184 RTIMALSFWKP 152
R + A+S WKP
Sbjct: 570 RVLYAVSCWKP 580
>TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription factor family
protein | chr3:17158379-17159799 FORWARD
Length = 454
Score = 161 bits (405), Expect = 4e-040
Identities = 75/131 (57%), Positives = 95/131 (72%), Gaps = 1/131 (0%)
Frame = -3
Query: 544 GHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLER 365
G N+PFFLTRFREAL H SLFDM E T+S +D R + E+E+ RD ++V+ACEG ER
Sbjct: 321 GTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSER 380
Query: 364 VERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGWKG 185
RPETY+QWQVR LRAGF+ L ++++K+ K + K RYH DF +D D HWM QGWKG
Sbjct: 381 FARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVK-ERYHKDFVIDNDNHWMFQGWKG 439
Query: 184 RTIMALSFWKP 152
R + A+S WKP
Sbjct: 440 RVLYAVSCWKP 450
>TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription factor family
protein | chr3:17158052-17159799 FORWARD
Length = 552
Score = 161 bits (405), Expect = 4e-040
Identities = 75/131 (57%), Positives = 95/131 (72%), Gaps = 1/131 (0%)
Frame = -3
Query: 544 GHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLER 365
G N+PFFLTRFREAL H SLFDM E T+S +D R + E+E+ RD ++V+ACEG ER
Sbjct: 419 GTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSER 478
Query: 364 VERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGWKG 185
RPETY+QWQVR LRAGF+ L ++++K+ K + K RYH DF +D D HWM QGWKG
Sbjct: 479 FARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVK-ERYHKDFVIDNDNHWMFQGWKG 537
Query: 184 RTIMALSFWKP 152
R + A+S WKP
Sbjct: 538 RVLYAVSCWKP 548
>TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcription factor 11
(SCL11) | chr5:23974808-23976640 FORWARD
Length = 611
Score = 159 bits (401), Expect = 1e-039
Identities = 75/137 (54%), Positives = 98/137 (71%), Gaps = 3/137 (2%)
Frame = -3
Query: 544 GHTNAPFFLTRFREALLHFYSLFDMLEVTISREDE--QRVMFEQEIYGRDILNVVACEGL 371
G N+PFF+TRFREAL H+ SLFDM + TI EDE R + E+E+ RD ++V++CEG
Sbjct: 468 GMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGA 527
Query: 370 ERVERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGW 191
ER RPETY+QW+VR LRAGFK + ++++KE K + + RYH DF +D D +WMLQGW
Sbjct: 528 ERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVR-KRYHRDFVIDSDNNWMLQGW 586
Query: 190 KGRTIMALSFWKPT*EF 140
KGR I A S WKP +F
Sbjct: 587 KGRVIYAFSCWKPAEKF 603
>TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription
factor | chr3:819636-821279 REVERSE
Length = 548
Score = 94 bits (233), Expect = 4e-020
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Frame = -3
Query: 550 QWGHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIY-GRDILNVVACEG 374
Q + N FL RF EAL ++ SLFD LE + S + RVM E+Y GR ILNVVA EG
Sbjct: 415 QEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVM--SEVYLGRQILNVVAAEG 472
Query: 373 LERVERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQG 194
+RVER ET QW++R AGF + L K+ + + + +RV+E+ ++ G
Sbjct: 473 SDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIG 532
Query: 193 WKGRTIMALSFWK 155
W+ R ++ S WK
Sbjct: 533 WQTRPLITTSAWK 545
>TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
transcription factor | chr1:7509721-7511502 FORWARD
Length = 594
Score = 90 bits (221), Expect = 9e-019
Identities = 42/129 (32%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
Frame = -3
Query: 541 HTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLERV 362
+TN F RF EA ++ ++F+ L++T+ RE ++R+ E++ RDI+N+VACEG ER+
Sbjct: 466 NTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERI 525
Query: 361 ERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGWKGR 182
ER E +W+ R + AGF P+ K+ ++ + K +Y N +++ E+ + W+ +
Sbjct: 526 ERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIK-QQYCNKYKLKEEMGELHFCWEEK 584
Query: 181 TIMALSFWK 155
+++ S W+
Sbjct: 585 SLIVASAWR 593
>TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 89 bits (220), Expect = 1e-018
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Frame = -3
Query: 550 QWGHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGL 371
Q +TN F RF E + ++ ++F+ ++VT+ R+ +QR+ EQ RD++N++ACEG
Sbjct: 361 QESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGA 420
Query: 370 ERVERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGW 191
+RVER E +W+ R AGF PL + +K++ + Y + +R++E + GW
Sbjct: 421 DRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSL--LRNYSDKYRLEERDGALYLGW 478
Query: 190 KGRTIMALSFW 158
R ++A W
Sbjct: 479 MHRDLVASCAW 489
>TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 89 bits (220), Expect = 1e-018
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Frame = -3
Query: 550 QWGHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGL 371
Q +TN F RF E + ++ ++F+ ++VT+ R+ +QR+ EQ RD++N++ACEG
Sbjct: 361 QESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGA 420
Query: 370 ERVERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGW 191
+RVER E +W+ R AGF PL + +K++ + Y + +R++E + GW
Sbjct: 421 DRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSL--LRNYSDKYRLEERDGALYLGW 478
Query: 190 KGRTIMALSFW 158
R ++A W
Sbjct: 479 MHRDLVASCAW 489
>TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
transcription factor | chr2:1720575-1721816 REVERSE
Length = 414
Score = 86 bits (212), Expect = 1e-017
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Frame = -3
Query: 541 HTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLERV 362
+TN FL RF E L ++ ++F+ ++V + R ++R+ EQ RD++N++ACEG ER+
Sbjct: 287 NTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERI 346
Query: 361 ERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGWKGR 182
ER E +W+ R AGF+ PL + ++ + + Y N + ++E + GW R
Sbjct: 347 ERHELLGKWKSRFSMAGFEPYPLSSIISATIRAL--LRDYSNGYAIEERDGALYLGWMDR 404
Query: 181 TIMALSFW 158
+++ W
Sbjct: 405 ILVSSCAW 412
>TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID
INSENSITIVE); transcription factor | chr1:5149414-5151015 FORWARD
Length = 534
Score = 86 bits (211), Expect = 1e-017
Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Frame = -3
Query: 550 QWGHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIY-GRDILNVVACEG 374
Q + N+P FL RF E+L ++ +LFD LE S +D +VM E+Y G+ I NVVAC+G
Sbjct: 401 QESNHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQD--KVM--SEVYLGKQICNVVACDG 456
Query: 373 LERVERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQG 194
+RVER ET QW+ R AGF + K+ + + +RV+E ++ G
Sbjct: 457 PDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGCLMLG 516
Query: 193 WKGRTIMALSFWK 155
W R ++A S WK
Sbjct: 517 WHTRPLIATSAWK 529
>TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcription factor 8
(SCL8) | chr5:21307196-21309118 FORWARD
Length = 641
Score = 86 bits (211), Expect = 1e-017
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Frame = -3
Query: 541 HTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLERV 362
++N FL R E+ + +L + +E T+ + R E+ I GR ++N VACEG++R+
Sbjct: 515 NSNTAPFLGRVSESCACYGALLESVESTVPSTNSDRAKVEEGI-GRKLVNAVACEGIDRI 573
Query: 361 ERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGWKGR 182
ER E + +W++R AGF+ +PL +K+ + +K S+ R H F V ED + GW GR
Sbjct: 574 ERCEVFGKWRMRMSMAGFELMPLSEKIAESMK--SRGNRVHPGFTVKEDNGGVCFGWMGR 631
Query: 181 TIMALSFWK 155
+ S W+
Sbjct: 632 ALTVASAWR 640
>TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3);
transcription factor | chr5:5764316-5765887 REVERSE
Length = 524
Score = 85 bits (208), Expect = 3e-017
Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Frame = -3
Query: 550 QWGHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIY-GRDILNVVACEG 374
Q + N FL RF EAL ++ SLFD LE + + RVM E+Y GR ILN+VA EG
Sbjct: 386 QEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVM--SEVYLGRQILNLVATEG 443
Query: 373 LERVERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQG 194
+R+ER ET QW+ R AGF + L K+ + + + +RV+E+ ++
Sbjct: 444 SDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLA 503
Query: 193 WKGRTIMALSFWK 155
W+ + ++A S WK
Sbjct: 504 WQTKPLIAASAWK 516
>TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
chr1:18737398-18739547 REVERSE
Length = 598
Score = 84 bits (207), Expect = 4e-017
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
Frame = -3
Query: 550 QWGHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGL 371
Q +TN FL RF E + H+ ++F+ ++V ++R+ ++R+ EQ R+++N++ACEG+
Sbjct: 468 QEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGV 527
Query: 370 ERVERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGW 191
ER ER E +W+ R AGFK PL + +K + + Y + ++E + GW
Sbjct: 528 EREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGL--LESYSEKYTLEERDGALYLGW 585
Query: 190 KGRTIMALSFW 158
K + ++ W
Sbjct: 586 KNQPLITSCAW 596
>TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1);
transcription factor | chr1:24748327-24749862 FORWARD
Length = 512
Score = 84 bits (207), Expect = 4e-017
Identities = 51/132 (38%), Positives = 74/132 (56%), Gaps = 4/132 (3%)
Frame = -3
Query: 550 QWGHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGL 371
Q + N FL RF E+L ++ SLFD LE S++ RVM E GR ILN+VACEG
Sbjct: 379 QEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQD---RVMSEL-FLGRQILNLVACEGE 434
Query: 370 ERVERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGW 191
+RVER ET QW+ R GFK + + K+ + + + + V+E+ +L GW
Sbjct: 435 DRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGW 494
Query: 190 KGRTIMALSFWK 155
+ R ++A S W+
Sbjct: 495 QTRPLIATSAWR 506
>TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13);
transcription factor | chr4:9661218-9662807 REVERSE
Length = 530
Score = 84 bits (206), Expect = 5e-017
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Frame = -3
Query: 550 QWGHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGL 371
Q +TN FL+RF E L ++ ++F+ ++ R+D+QR+ EQ RDI+N++ACE
Sbjct: 396 QESNTNTSPFLSRFVETLDYYTAMFESIDAARPRDDKQRISAEQHCVARDIVNMIACEES 455
Query: 370 ERVERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGW 191
ERVER E W+VR + AGF P+ M K Y ++++ + W
Sbjct: 456 ERVERHEVLGIWRVRMMMAGFTGWPVSTSAAFAASEMLKA--YDKNYKLGGHEGALYLFW 513
Query: 190 KGRTIMALSFWKP 152
K R + S WKP
Sbjct: 514 KRRPMATCSVWKP 526
>TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1);
protein binding / transcription factor | chr2:255581-257344 REVERSE
Length = 588
Score = 81 bits (199), Expect = 3e-016
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Frame = -3
Query: 550 QWGHTNAPFFLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIY-GRDILNVVACEG 374
Q + N P FL RF E+L ++ +LFD LE + +D +VM E+Y G+ I N+VACEG
Sbjct: 453 QESNHNGPVFLDRFTESLHYYSTLFDSLEGVPNSQD--KVM--SEVYLGKQICNLVACEG 508
Query: 373 LERVERPETYRQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQG 194
+RVER ET QW R +G L K+ + V +RV+E ++ G
Sbjct: 509 PDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLG 568
Query: 193 WKGRTIMALSFWK 155
W R ++ S WK
Sbjct: 569 WHTRPLITTSAWK 581
>TAIR9_protein||AT3G49950.1 | Symbols: | scarecrow transcription factor family
protein | chr3:18522570-18523802 FORWARD
Length = 411
Score = 62 bits (148), Expect = 3e-010
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Frame = -3
Query: 520 LTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLERVERPETYR 341
+ R + A +F+ FD + +S EQR +E EI + I NVVA EG ERVER ET R
Sbjct: 291 VNRLKSAFNYFWIPFDTTDTFMS---EQRRWYEAEISWK-IENVVAKEGAERVERTETKR 346
Query: 340 QWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHNDFRVDEDGHWMLQGWKGRTIMALSF 161
+W R A F + + + + +VK M + + ++D ++ WKG +++ +
Sbjct: 347 RWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFATV 406
Query: 160 WKP 152
W P
Sbjct: 407 WVP 409
>TAIR9_protein||AT1G63100.1 | Symbols: | scarecrow transcription factor family
protein | chr1:23399391-23401367 REVERSE
Length = 659
Score = 59 bits (140), Expect = 2e-009
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Frame = -3
Query: 517 TRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLERVERPETYRQ 338
TR +L ++ ++FD + ++ + RV E+ ++GR+I N+VACEG R ER +R
Sbjct: 522 TRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRH 581
Query: 337 WQVRNLRAGFKQLPLDQKLLKEVKTMSKVM-----RYHNDFRVDED 215
W+ + GF+ L + ++ + + K + ++ + N R DED
Sbjct: 582 WRRMLEQLGFRSLGVSEREVLQSKMLLRMYGSDNEGFFNVERSDED 627
>TAIR9_protein||AT4G37650.1 | Symbols: SHR, SGR7 | SHR (SHORT ROOT); protein
binding / sequence-specific DNA binding / transcription factor |
chr4:17691871-17693466 FORWARD
Length = 532
Score = 55 bits (131), Expect = 2e-008
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Frame = -3
Query: 523 FLTRFREALLHFYSLFDMLEVTISREDEQRVMFEQEIYGRDILNVVACEGLERVERPETY 344
FL F E L F F+ E + R +R+M E+ GR I+++VACE + ER ET
Sbjct: 407 FLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAA-GRAIVDLVACEPSDSTERRETA 465
Query: 343 RQWQVRNLRAGFKQLPLDQKLLKEVKTMSKVMRYHN---DFRVDEDGHWMLQGWKGRTIM 173
R+W R +GF + ++ +V+ + + RY D + W+ + ++
Sbjct: 466 RKWSRRMRNSGFGAVGYSDEVADDVRAL--LRRYKEGVWSMVQCPDAAGIFLCWRDQPVV 523
Query: 172 ALSFWKPT* 146
S W+PT*
Sbjct: 524 WASAWRPT* 532
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,971,710,044
Number of Sequences: 33410
Number of Extensions: 3971710044
Number of Successful Extensions: 218040509
Number of sequences better than 0.0: 0
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