BLASTX 7.6.2
Query= RU23320 /QuerySize=647
(646 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G19850.1 | Symbols: MP, ARF5, IAA24 | MP (MONO... 190 1e-048
TAIR9_protein||AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, T... 137 8e-033
TAIR9_protein||AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, T... 137 8e-033
TAIR9_protein||AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, T... 137 8e-033
TAIR9_protein||AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF1... 136 1e-032
TAIR9_protein||AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONS... 133 9e-032
TAIR9_protein||AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONS... 133 9e-032
TAIR9_protein||AT5G37020.1 | Symbols: ARF8, ATARF8 | ARF8 (AUXIN... 112 2e-025
TAIR9_protein||AT5G37020.2 | Symbols: ARF8 | ARF8 (AUXIN RESPONS... 91 4e-019
TAIR9_protein||AT5G60450.1 | Symbols: ARF4 | ARF4 (AUXIN RESPONS... 89 3e-018
TAIR9_protein||AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 ... 84 5e-017
TAIR9_protein||AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 ... 84 5e-017
TAIR9_protein||AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 ... 84 5e-017
TAIR9_protein||AT1G59750.1 | Symbols: ARF1 | ARF1 (AUXIN RESPONS... 82 2e-016
TAIR9_protein||AT1G59750.2 | Symbols: ARF1 | ARF1 (AUXIN RESPONS... 82 2e-016
TAIR9_protein||AT1G59750.3 | Symbols: ARF1 | ARF1 (AUXIN RESPONS... 82 2e-016
TAIR9_protein||AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONS... 72 3e-013
TAIR9_protein||AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONS... 72 3e-013
TAIR9_protein||AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPO... 68 4e-012
TAIR9_protein||AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPO... 68 4e-012
TAIR9_protein||AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPO... 68 4e-012
TAIR9_protein||AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPO... 68 4e-012
TAIR9_protein||AT1G35240.1 | Symbols: ARF20 | ARF20 (AUXIN RESPO... 65 3e-011
TAIR9_protein||AT1G34410.1 | Symbols: ARF21 | ARF21 (AUXIN RESPO... 64 5e-011
TAIR9_protein||AT1G35520.1 | Symbols: ARF15 | ARF15 (AUXIN RESPO... 63 2e-010
TAIR9_protein||AT1G34310.1 | Symbols: ARF12 | ARF12 (AUXIN RESPO... 62 3e-010
TAIR9_protein||AT1G34390.1 | Symbols: ARF22 | ARF22 (AUXIN RESPO... 60 1e-009
TAIR9_protein||AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOL... 57 8e-009
TAIR9_protein||AT1G34170.3 | Symbols: | transcription factor | ... 56 2e-008
TAIR9_protein||AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-1... 53 2e-007
>TAIR9_protein||AT1G19850.1 | Symbols: MP, ARF5, IAA24 | MP (MONOPTEROS);
transcription factor | chr1:6887353-6891182 FORWARD
Length = 903
Score = 190 bits (480), Expect = 1e-048
Identities = 92/103 (89%), Positives = 96/103 (93%)
Frame = +1
Query: 16 PPVRTYTKVQKAGSVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYE 195
P VRTYTKVQK GSVGRSIDVTS+ +YEEL SAIECMFGLEGLL P+ SGWKLVYVDYE
Sbjct: 790 PRVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYE 849
Query: 196 NDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSA 324
+DVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSA
Sbjct: 850 SDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSA 892
>TAIR9_protein||AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/
transcription factor/ transcription regulator | chr5:7016704-7021504
REVERSE
Length = 1166
Score = 137 bits (343), Expect = 8e-033
Identities = 66/101 (65%), Positives = 76/101 (75%)
Frame = +1
Query: 1 WHQVVPPVRTYTKVQKAGSVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLV 180
W +RTYTKVQK GSVGRSIDV Y Y+EL + MFG+EG L DP+ S WKLV
Sbjct: 1030 WPAQTQRMRTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLV 1089
Query: 181 YVDYENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEG 303
YVD+END+LLVGDDPWEEFV CV+ I+ILS EVQQMS +G
Sbjct: 1090 YVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDG 1130
>TAIR9_protein||AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/
transcription factor/ transcription regulator | chr5:7016704-7021504
REVERSE
Length = 1165
Score = 137 bits (343), Expect = 8e-033
Identities = 66/101 (65%), Positives = 76/101 (75%)
Frame = +1
Query: 1 WHQVVPPVRTYTKVQKAGSVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLV 180
W +RTYTKVQK GSVGRSIDV Y Y+EL + MFG+EG L DP+ S WKLV
Sbjct: 1029 WPAQTQRMRTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLV 1088
Query: 181 YVDYENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEG 303
YVD+END+LLVGDDPWEEFV CV+ I+ILS EVQQMS +G
Sbjct: 1089 YVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDG 1129
>TAIR9_protein||AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP,
IAA23, IAA25 | NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding /
transcription activator/ transcription factor/ transcription regulator
| chr5:7016704-7021504 REVERSE
Length = 1151
Score = 137 bits (343), Expect = 8e-033
Identities = 66/101 (65%), Positives = 76/101 (75%)
Frame = +1
Query: 1 WHQVVPPVRTYTKVQKAGSVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLV 180
W +RTYTKVQK GSVGRSIDV Y Y+EL + MFG+EG L DP+ S WKLV
Sbjct: 1030 WPAQTQRMRTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLV 1089
Query: 181 YVDYENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEG 303
YVD+END+LLVGDDPWEEFV CV+ I+ILS EVQQMS +G
Sbjct: 1090 YVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDG 1130
>TAIR9_protein||AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN
RESPONSE FACTOR 19); DNA binding / transcription factor |
chr1:6628395-6632779 REVERSE
Length = 1087
Score = 136 bits (342), Expect = 1e-032
Identities = 66/101 (65%), Positives = 76/101 (75%)
Frame = +1
Query: 1 WHQVVPPVRTYTKVQKAGSVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLV 180
W +RTYTKVQK GSVGRSIDVT Y+ Y+EL + MFG+EG L DP S WKLV
Sbjct: 950 WPNQTQRMRTYTKVQKRGSVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLV 1009
Query: 181 YVDYENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEG 303
Y D+END+LLVGDDPWEEFV CV+ I+ILS EVQQMS +G
Sbjct: 1010 YTDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMSLDG 1050
>TAIR9_protein||AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 934
Score = 133 bits (334), Expect = 9e-032
Identities = 63/109 (57%), Positives = 81/109 (74%)
Frame = +1
Query: 16 PPVRTYTKVQKAGSVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYE 195
P T+ KV K+GS GRS+D++ +++Y EL S + MFGLEG L DP SGW+LV+VD E
Sbjct: 791 PQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRE 850
Query: 196 NDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAAALQGI 342
NDVLL+GDDPW EFV V CI+ILSP EVQQM + G++LLNSA + +
Sbjct: 851 NDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLELLNSAPSSNNV 899
>TAIR9_protein||AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 936
Score = 133 bits (334), Expect = 9e-032
Identities = 63/109 (57%), Positives = 81/109 (74%)
Frame = +1
Query: 16 PPVRTYTKVQKAGSVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYE 195
P T+ KV K+GS GRS+D++ +++Y EL S + MFGLEG L DP SGW+LV+VD E
Sbjct: 793 PQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRE 852
Query: 196 NDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAAALQGI 342
NDVLL+GDDPW EFV V CI+ILSP EVQQM + G++LLNSA + +
Sbjct: 853 NDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLELLNSAPSSNNV 901
>TAIR9_protein||AT5G37020.1 | Symbols: ARF8, ATARF8 | ARF8 (AUXIN RESPONSE
FACTOR 8); transcription factor | chr5:14630151-14634106 FORWARD
Length = 812
Score = 112 bits (279), Expect = 2e-025
Identities = 51/93 (54%), Positives = 69/93 (74%)
Frame = +1
Query: 25 RTYTKVQKAGSVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYENDV 204
+ + KV K+GSVGRS+D++ +++Y EL + MF +EGLL DP SGW+LV+VD END+
Sbjct: 705 KNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDI 764
Query: 205 LLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEG 303
LL+GDDPWE FV V I+ILSP +V QM + G
Sbjct: 765 LLLGDDPWESFVNNVWYIKILSPEDVHQMGDHG 797
>TAIR9_protein||AT5G37020.2 | Symbols: ARF8 | ARF8 (AUXIN RESPONSE FACTOR 8);
transcription factor | chr5:14630151-14633916 FORWARD
Length = 774
Score = 91 bits (225), Expect = 4e-019
Identities = 39/69 (56%), Positives = 54/69 (78%)
Frame = +1
Query: 25 RTYTKVQKAGSVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYENDV 204
+ + KV K+GSVGRS+D++ +++Y EL + MF +EGLL DP SGW+LV+VD END+
Sbjct: 705 KNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDI 764
Query: 205 LLVGDDPWE 231
LL+GDDPWE
Sbjct: 765 LLLGDDPWE 773
>TAIR9_protein||AT5G60450.1 | Symbols: ARF4 | ARF4 (AUXIN RESPONSE FACTOR 4);
transcription factor | chr5:24308558-24312187 REVERSE
Length = 789
Score = 89 bits (218), Expect = 3e-018
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Frame = +1
Query: 25 RTYTKVQKAGS-VGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
R TKV K GS VGR+ID++ Y++L +E +F +EGLL DP GW+++Y D END
Sbjct: 665 RICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPE-KGWRILYTDSEND 723
Query: 202 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAAAL 333
+++VGDDPW +F V I + + EV+ +++ L AA +
Sbjct: 724 MMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNKSCLEQAALM 767
>TAIR9_protein||AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 860
Score = 84 bits (207), Expect = 5e-017
Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
R+ TKV K G ++GRS+D++ + NYEEL + ++ +F G L P+ W +VY D END
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPK-KDWLIVYTDEEND 791
Query: 202 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAAALQGIG 345
++LVGDDPW+EF VR I I + EV++M+ + + A+ G G
Sbjct: 792 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGTLSCRSEEEAVVGEG 839
>TAIR9_protein||AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 860
Score = 84 bits (207), Expect = 5e-017
Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
R+ TKV K G ++GRS+D++ + NYEEL + ++ +F G L P+ W +VY D END
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPK-KDWLIVYTDEEND 791
Query: 202 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAAALQGIG 345
++LVGDDPW+EF VR I I + EV++M+ + + A+ G G
Sbjct: 792 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGTLSCRSEEEAVVGEG 839
>TAIR9_protein||AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 860
Score = 84 bits (207), Expect = 5e-017
Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
R+ TKV K G ++GRS+D++ + NYEEL + ++ +F G L P+ W +VY D END
Sbjct: 733 RSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPK-KDWLIVYTDEEND 791
Query: 202 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAAALQGIG 345
++LVGDDPW+EF VR I I + EV++M+ + + A+ G G
Sbjct: 792 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGTLSCRSEEEAVVGEG 839
>TAIR9_protein||AT1G59750.1 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1);
DNA binding / transcription factor | chr1:21980414-21984193 FORWARD
Length = 666
Score = 82 bits (202), Expect = 2e-016
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Frame = +1
Query: 22 VRTYTKVQKAGS-VGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEN 198
+R+ TKV GS VGR+ID+T YE+L +E MF ++G L + W++VY D E+
Sbjct: 541 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLEST-KKWQVVYTDDED 599
Query: 199 DVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAAALQ 336
D+++VGDDPW EF G VR I I +P EV+++S + +N+ L+
Sbjct: 600 DMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLK 645
>TAIR9_protein||AT1G59750.2 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1);
DNA binding / transcription factor | chr1:21980414-21984193 FORWARD
Length = 663
Score = 82 bits (202), Expect = 2e-016
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Frame = +1
Query: 22 VRTYTKVQKAGS-VGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEN 198
+R+ TKV GS VGR+ID+T YE+L +E MF ++G L + W++VY D E+
Sbjct: 538 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLEST-KKWQVVYTDDED 596
Query: 199 DVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAAALQ 336
D+++VGDDPW EF G VR I I +P EV+++S + +N+ L+
Sbjct: 597 DMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLK 642
>TAIR9_protein||AT1G59750.3 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1);
DNA binding / transcription factor | chr1:21980414-21984193 FORWARD
Length = 666
Score = 82 bits (202), Expect = 2e-016
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Frame = +1
Query: 22 VRTYTKVQKAGS-VGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEN 198
+R+ TKV GS VGR+ID+T YE+L +E MF ++G L + W++VY D E+
Sbjct: 541 IRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLEST-KKWQVVYTDDED 599
Query: 199 DVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAAALQ 336
D+++VGDDPW EF G VR I I +P EV+++S + +N+ L+
Sbjct: 600 DMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKLAVNARMQLK 645
>TAIR9_protein||AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 639
Score = 72 bits (174), Expect = 3e-013
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
R+ TKVQ G VGR++D+ + Y EL IE +F ++G L + W++V+ D E D
Sbjct: 523 RSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS--RNQWEIVFTDDEGD 580
Query: 202 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 294
++LVGDDPW EF V+ I I S EV++M+
Sbjct: 581 MMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 611
>TAIR9_protein||AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 637
Score = 72 bits (174), Expect = 3e-013
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
R+ TKVQ G VGR++D+ + Y EL IE +F ++G L + W++V+ D E D
Sbjct: 521 RSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS--RNQWEIVFTDDEGD 578
Query: 202 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 294
++LVGDDPW EF V+ I I S EV++M+
Sbjct: 579 MMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 609
>TAIR9_protein||AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19104993-19108029 FORWARD
Length = 602
Score = 68 bits (165), Expect = 4e-012
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
R+ KVQ G +VGR++D+T +Y+EL +E MF +EG L+ P+ W +V+ D E D
Sbjct: 490 RSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS-PKDK-WAIVFTDDEGD 547
Query: 202 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGM 306
+LVGDDPW EF + + I EV++M + +
Sbjct: 548 RMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSL 582
>TAIR9_protein||AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105511-19108029 FORWARD
Length = 515
Score = 68 bits (165), Expect = 4e-012
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
R+ KVQ G +VGR++D+T +Y+EL +E MF +EG L+ P+ W +V+ D E D
Sbjct: 403 RSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS-PKDK-WAIVFTDDEGD 460
Query: 202 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGM 306
+LVGDDPW EF + + I EV++M + +
Sbjct: 461 RMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSL 495
>TAIR9_protein||AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105112-19108029 FORWARD
Length = 623
Score = 68 bits (165), Expect = 4e-012
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
R+ KVQ G +VGR++D+T +Y+EL +E MF +EG L+ P+ W +V+ D E D
Sbjct: 511 RSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS-PKDK-WAIVFTDDEGD 568
Query: 202 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGM 306
+LVGDDPW EF + + I EV++M + +
Sbjct: 569 RMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSL 603
>TAIR9_protein||AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);
transcription factor | chr3:22888171-22891179 FORWARD
Length = 603
Score = 68 bits (165), Expect = 4e-012
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
R+ TKVQ G +VGR++D+T +Y+EL +E MF ++G L W +V+ D E D
Sbjct: 489 RSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQL--LARDKWIVVFTDDEGD 546
Query: 202 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 294
++L GDDPW EF + I I S EV++M+
Sbjct: 547 MMLAGDDPWNEFCKMAKKIFIYSSDEVKKMT 577
>TAIR9_protein||AT1G35240.1 | Symbols: ARF20 | ARF20 (AUXIN RESPONSE FACTOR 20);
transcription factor | chr1:12927457-12930523 REVERSE
Length = 591
Score = 65 bits (157), Expect = 3e-011
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
RT TKVQ G ++GR++D++ Y++L +E +F L+G L + WK+ + D +
Sbjct: 495 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ--TRNQWKIAFTDSDGY 552
Query: 202 VLLVGDDPWEEFVGCVRCIRILSPTEVQQM 291
+LVGDDPW EF V+ I I S EV+ +
Sbjct: 553 EMLVGDDPWPEFCKMVKKILIYSKEEVKNL 582
>TAIR9_protein||AT1G34410.1 | Symbols: ARF21 | ARF21 (AUXIN RESPONSE FACTOR 21);
transcription factor | chr1:12577722-12580824 FORWARD
Length = 607
Score = 64 bits (155), Expect = 5e-011
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
RT TKVQ G ++GR++D++ Y++L +E +F ++G L + WK+ + D +
Sbjct: 511 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQ--TRNQWKIAFTDSDGY 568
Query: 202 VLLVGDDPWEEFVGCVRCIRILSPTEVQQM 291
+LVGDDPW EF V+ I I S EV+ +
Sbjct: 569 EMLVGDDPWPEFCKMVKKILIYSKEEVKNL 598
>TAIR9_protein||AT1G35520.1 | Symbols: ARF15 | ARF15 (AUXIN RESPONSE FACTOR 15);
transcription factor | chr1:13082819-13085830 REVERSE
Length = 599
Score = 63 bits (151), Expect = 2e-010
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
RT TKVQ G ++GR++D++ Y++L +E +F L+G L + WK+++ + D
Sbjct: 516 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ--TRNQWKIIFTGSDED 573
Query: 202 VLLVGDDPWEEFVGCVRCIRI 264
+LVGDDPW EF V+ I I
Sbjct: 574 EMLVGDDPWPEFCNMVKRIYI 594
>TAIR9_protein||AT1G34310.1 | Symbols: ARF12 | ARF12 (AUXIN RESPONSE FACTOR 12);
transcription factor | chr1:12508548-12511520 REVERSE
Length = 594
Score = 62 bits (148), Expect = 3e-010
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
RT TKVQ G ++GR++D++ Y++L +E +F ++G L + W++ + D + D
Sbjct: 511 RTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQ--TRNQWEIAFTDSDED 568
Query: 202 VLLVGDDPWEEFVGCVRCIRI 264
+LVGDDPW EF V+ I I
Sbjct: 569 KMLVGDDPWPEFCNMVKKIFI 589
>TAIR9_protein||AT1G34390.1 | Symbols: ARF22 | ARF22 (AUXIN RESPONSE FACTOR 22);
transcription factor | chr1:12556005-12559082 FORWARD
Length = 599
Score = 60 bits (143), Expect = 1e-009
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +1
Query: 25 RTYTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 201
RT TKVQ G ++ R++D++ Y++L +E +F L+G L + W++ + D ++D
Sbjct: 509 RTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQ--TRNQWEIAFTDSDDD 566
Query: 202 VLLVGDDPWEEFVGCVRCIRI 264
+LVGDDPW EF V+ I I
Sbjct: 567 KMLVGDDPWPEFCNMVKKILI 587
>TAIR9_protein||AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID
INDUCIBLE 28); transcription factor | chr5:9033480-9034554 FORWARD
Length = 176
Score = 57 bits (136), Expect = 8e-009
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = +1
Query: 31 YTKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYENDVL 207
Y K+ G +GR +++++Y NY++L A++ +F + + R + LVY D E D +
Sbjct: 82 YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNR--QYTLVYEDTEGDKV 139
Query: 208 LVGDDPWEEFVGCVRCIRILSPTEVQQMS 294
LVGD PWE FV V+ + +L + +S
Sbjct: 140 LVGDVPWEMFVSTVKRLHVLKTSHAFSLS 168
>TAIR9_protein||AT1G34170.3 | Symbols: | transcription factor |
chr1:12443578-12446764 REVERSE
Length = 547
Score = 56 bits (133), Expect = 2e-008
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +1
Query: 34 TKVQKAG-SVGRSIDVTSYTNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYENDVLL 210
TKV G ++ R++D+T+ Y +L +E +F L+ L + W++V+ + E +L
Sbjct: 436 TKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELR--TRNQWEIVFTNNEGAEML 493
Query: 211 VGDDPWEEFVGCVRCIRILSPTEVQQM 291
VGDDPW EF + I I S E+++M
Sbjct: 494 VGDDPWPEFCNMAKRIFICSKEEIKKM 520
>TAIR9_protein||AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN
INDUCIBLE 2-11); DNA binding / transcription factor |
chr5:17550465-17551206 FORWARD
Length = 187
Score = 53 bits (125), Expect = 2e-007
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Frame = +1
Query: 31 YTKVQKAGS-VGRSIDVTSYTNYEELCSAIECMF----GLEGLLNDPRGSGWKLVYVDYE 195
Y KV G+ R ID+T Y Y EL ++E MF G +GS + Y D +
Sbjct: 90 YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKD 149
Query: 196 NDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGM 306
D +LVGD PWE FV + +RI+ +EV+ + G+
Sbjct: 150 GDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCGGL 186
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,031,423,600
Number of Sequences: 33410
Number of Extensions: 4031423600
Number of Successful Extensions: 224022325
Number of sequences better than 0.0: 0
|