BLASTX 7.6.2
Query= RU23350 /QuerySize=564
(563 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a... 274 3e-074
TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a... 274 3e-074
TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription... 267 4e-072
TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-L... 263 6e-071
TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-l... 224 4e-059
TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIK... 212 1e-055
TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcri... 153 7e-038
TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SC... 136 1e-032
TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription... 128 2e-030
TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcri... 119 2e-027
TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription... 117 7e-027
TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription... 117 7e-027
TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription... 117 7e-027
TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcri... 116 1e-026
TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE... 115 2e-026
TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription... 109 1e-024
TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); ... 107 4e-024
TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELL... 106 1e-023
TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSO... 105 2e-023
TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROT... 103 1e-022
TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transc... 90 9e-019
TAIR9_protein||AT1G63100.1 | Symbols: | scarecrow transcription... 88 3e-018
TAIR9_protein||AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW... 86 2e-017
TAIR9_protein||AT5G66770.1 | Symbols: | scarecrow transcription... 86 2e-017
TAIR9_protein||AT5G41920.1 | Symbols: | scarecrow transcription... 80 6e-016
TAIR9_protein||AT3G50650.1 | Symbols: | scarecrow-like transcri... 76 1e-014
TAIR9_protein||AT3G49950.1 | Symbols: | scarecrow transcription... 75 2e-014
>TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 274 bits (699), Expect = 3e-074
Identities = 130/183 (71%), Positives = 162/183 (88%)
Frame = +2
Query: 14 GDVALVGKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDE 193
G +++VG RL++LA+ + VPFEF++ +S SEV+ ++LGV+ GEALAVNFAF+LHHMPDE
Sbjct: 274 GGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDE 333
Query: 194 SVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALP 373
SVS +N RDRLLR+VKSLSPKVVTLVEQESNTNTA F PRF ET +Y++A+F+SIDV LP
Sbjct: 334 SVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLP 393
Query: 374 REHKERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSSIINAT 553
R+HK+RINVEQHCLAR++VNIIACEG +RVER ELL KWRSRF MAGF+PYPLS ++N+T
Sbjct: 394 RDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNST 453
Query: 554 IKT 562
IK+
Sbjct: 454 IKS 456
>TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 274 bits (699), Expect = 3e-074
Identities = 130/183 (71%), Positives = 162/183 (88%)
Frame = +2
Query: 14 GDVALVGKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDE 193
G +++VG RL++LA+ + VPFEF++ +S SEV+ ++LGV+ GEALAVNFAF+LHHMPDE
Sbjct: 274 GGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDE 333
Query: 194 SVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALP 373
SVS +N RDRLLR+VKSLSPKVVTLVEQESNTNTA F PRF ET +Y++A+F+SIDV LP
Sbjct: 334 SVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLP 393
Query: 374 REHKERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSSIINAT 553
R+HK+RINVEQHCLAR++VNIIACEG +RVER ELL KWRSRF MAGF+PYPLS ++N+T
Sbjct: 394 RDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNST 453
Query: 554 IKT 562
IK+
Sbjct: 454 IKS 456
>TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
chr1:18737398-18739547 REVERSE
Length = 598
Score = 267 bits (681), Expect = 4e-072
Identities = 130/183 (71%), Positives = 153/183 (83%)
Frame = +2
Query: 11 RGDVALVGKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPD 190
+G + LVG+RL +LAE VPFEFH A + +EV++E LGV+ GEALAVNF +LHHMPD
Sbjct: 380 QGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPD 439
Query: 191 ESVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVAL 370
ESV+++N RDRLLR+VK LSP VVTLVEQE+NTNTAPF PRF ET +++ AVF+SIDV L
Sbjct: 440 ESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKL 499
Query: 371 PREHKERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSSIINA 550
R+HKERINVEQHCLARE+VN+IACEGVER ER E L KWRSRF MAGF PYPLSS +NA
Sbjct: 500 ARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNA 559
Query: 551 TIK 559
TIK
Sbjct: 560 TIK 562
>TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
transcription factor | chr2:1720575-1721816 REVERSE
Length = 414
Score = 263 bits (671), Expect = 6e-071
Identities = 128/185 (69%), Positives = 156/185 (84%), Gaps = 1/185 (0%)
Frame = +2
Query: 8 GRGDVAL-VGKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHM 184
G G V + V KRL +LA+ + VPF F+A + EV++E+L V+ GEAL VNFA+MLHH+
Sbjct: 194 GDGSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENLDVRDGEALGVNFAYMLHHL 253
Query: 185 PDESVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDV 364
PDESVS++N RDRLLR+VKSLSPKVVTLVEQE NTNT+PF PRF ET SY++A+F+SIDV
Sbjct: 254 PDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDV 313
Query: 365 ALPREHKERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSSII 544
LPR HKERIN+EQHC+AR++VNIIACEG ER+ER ELL KW+SRF MAGF PYPLSSII
Sbjct: 314 MLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSII 373
Query: 545 NATIK 559
+ATI+
Sbjct: 374 SATIR 378
>TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13);
transcription factor | chr4:9661218-9662807 REVERSE
Length = 530
Score = 224 bits (569), Expect = 4e-059
Identities = 108/175 (61%), Positives = 142/175 (81%)
Frame = +2
Query: 14 GDVALVGKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDE 193
G ++LVG+RL+ LA+S VPFEFH A +S +VQ E LG++ G A+ VNF ++LHHMPDE
Sbjct: 309 GGLSLVGERLATLAQSCGVPFEFHDAIMSGCKVQREHLGLEPGFAVVVNFPYVLHHMPDE 368
Query: 194 SVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALP 373
SVS++N RDRLL ++KSLSPK+VTLVEQESNTNT+PF RF ET Y++A+F+SID A P
Sbjct: 369 SVSVENHRDRLLHLIKSLSPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDAARP 428
Query: 374 REHKERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSS 538
R+ K+RI+ EQHC+AR+IVN+IACE ERVER E+L WR R +MAGF+ +P+S+
Sbjct: 429 RDDKQRISAEQHCVARDIVNMIACEESERVERHEVLGIWRVRMMMAGFTGWPVST 483
>TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
transcription factor | chr1:7509721-7511502 FORWARD
Length = 594
Score = 212 bits (539), Expect = 1e-055
Identities = 103/182 (56%), Positives = 134/182 (73%)
Frame = +2
Query: 14 GDVALVGKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDE 193
G + ++G RL +LAE V F+F A S V LG + GE L VNFAF LHHMPDE
Sbjct: 376 GGLRIIGLRLEQLAEDNGVSFKFKAMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDE 435
Query: 194 SVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALP 373
SV+ N RD LL +VKSL+PK+VT+VEQ+ NTNT+PF PRF E + Y+SAVF+S+D+ LP
Sbjct: 436 SVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLP 495
Query: 374 REHKERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSSIINAT 553
RE +ER+NVE+ CLAR+IVNI+ACEG ER+ER E KWR+R +MAGF+P P+S+ +
Sbjct: 496 RESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNN 555
Query: 554 IK 559
I+
Sbjct: 556 IQ 557
>TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcription factor 8
(SCL8) | chr5:21307196-21309118 FORWARD
Length = 641
Score = 153 bits (386), Expect = 7e-038
Identities = 80/186 (43%), Positives = 116/186 (62%), Gaps = 2/186 (1%)
Frame = +2
Query: 8 GRGDVALVGKRLSRLAESYKVPFEFH-AAGISASEVQLEDLGVQTGEALAVNFAFMLHHM 184
G + VG LS+L + + F+ + ++ E LG E LAVN AF L+ +
Sbjct: 422 GEERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRV 481
Query: 185 PDESVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDV 364
PDESV +NPRD LLR VK L P+VVTLVEQE N+NTAPF R +E+ + + A+ +S++
Sbjct: 482 PDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVES 541
Query: 365 ALPREHKERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSSII 544
+P + +R VE+ + R++VN +ACEG++R+ER E+ KWR R MAGF PLS I
Sbjct: 542 TVPSTNSDRAKVEEG-IGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKI 600
Query: 545 NATIKT 562
++K+
Sbjct: 601 AESMKS 606
>TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14
(SCARECROW-LIKE 14); transcription factor | chr1:2313828-2316137
REVERSE
Length = 770
Score = 136 bits (340), Expect = 1e-032
Identities = 68/176 (38%), Positives = 102/176 (57%)
Frame = +2
Query: 32 GKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESVSIQN 211
G RL+R + + VPFE++A +Q+EDL ++ GE + VN F ++ DE+V + +
Sbjct: 554 GHRLARYCQRHNVPFEYNAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNS 613
Query: 212 PRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREHKER 391
PRD +L++++ ++P V N N F RF E ++SAVFD D L RE + R
Sbjct: 614 PRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMR 673
Query: 392 INVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSSIINATIK 559
+ E+ REIVN++ACEG ERVER E +W++R I AGF PL + +K
Sbjct: 674 LMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLK 729
>TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription factor family
protein | chr2:12481991-12486941 FORWARD
Length = 1337
Score = 128 bits (321), Expect = 2e-030
Identities = 62/176 (35%), Positives = 103/176 (58%)
Frame = +2
Query: 32 GKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESVSIQN 211
G+RL++ + + +PFE++A ++LEDL ++ GE +AVN F ++ DE+V++ +
Sbjct: 480 GRRLAKYCQKFNIPFEYNAIAQKWESIKLEDLKLKEGEFVAVNSLFRFRNLLDETVAVHS 539
Query: 212 PRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREHKER 391
PRD +L++++ + P V + N F RF E ++S++FD D L RE R
Sbjct: 540 PRDTVLKLIRKIKPDVFIPGILSGSYNAPFFVTRFREVLFHYSSLFDMCDTNLTREDPMR 599
Query: 392 INVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSSIINATIK 559
+ E+ REI+N++ACEG ERVER E +W++R + AGF PL + +K
Sbjct: 600 VMFEKEFYGREIMNVVACEGTERVERPESYKQWQARAMRAGFRQIPLEKELVQKLK 655
Score = 121 bits (302), Expect = 4e-028
Identities = 63/164 (38%), Positives = 99/164 (60%), Gaps = 2/164 (1%)
Frame = +2
Query: 32 GKRLSRLAESYKVPFEFHA-AGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESVSIQ 208
G+RL+ + + VPFE+ A A + +++EDL ++ E LAVN L ++ DE+ S +
Sbjct: 1120 GRRLAEYCKRFNVPFEYKAIASQNWETIRIEDLDIRPNEVLAVNAGLRLKNLQDETGSEE 1179
Query: 209 N-PRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREHK 385
N PRD +L+++++++P V + N F RF E ++SA+FD D LPR++K
Sbjct: 1180 NCPRDAVLKLIRNMNPDVFIHAIVNGSFNAPFFISRFKEAVYHYSALFDMFDSTLPRDNK 1239
Query: 386 ERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGF 517
ERI E+ RE +N+IACE +RVER E +W+ R + AGF
Sbjct: 1240 ERIRFEREFYGREAMNVIACEEADRVERPETYRQWQVRMVRAGF 1283
>TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcription factor 11
(SCL11) | chr5:23974808-23976640 FORWARD
Length = 611
Score = 119 bits (296), Expect = 2e-027
Identities = 59/173 (34%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Frame = +2
Query: 32 GKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESVSIQN 211
G+RL R + + VPFEF+ + L++L + GE VN L + PDE+VS+ +
Sbjct: 385 GRRLKRFCDQFNVPFEFNFIAKKWETITLDELMINPGETTVVNCIHRLQYTPDETVSLDS 444
Query: 212 PRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVAL--PREHK 385
PRD +L++ + ++P + E N+ F RF E ++S++FD D + E+K
Sbjct: 445 PRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYK 504
Query: 386 ERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSSII 544
R +E+ L R+ +++I+CEG ER R E +WR R + AGF P +S I
Sbjct: 505 NRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQI 557
>TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription factor family
protein | chr3:17158048-17159799 FORWARD
Length = 584
Score = 117 bits (291), Expect = 7e-027
Identities = 58/171 (33%), Positives = 92/171 (53%)
Frame = +2
Query: 32 GKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESVSIQN 211
G+RL R + + VPFE+ + + L+DL + +GE VN L + PDE+VS+ +
Sbjct: 368 GRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNS 427
Query: 212 PRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREHKER 391
PRD L++ + ++P + E N+ F RF E + S++FD + L + R
Sbjct: 428 PRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCR 487
Query: 392 INVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSSII 544
VE+ + R+ +++IACEG ER R E +W+ R + AGF P LS I
Sbjct: 488 TLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQI 538
>TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription factor family
protein | chr3:17158379-17159799 FORWARD
Length = 454
Score = 117 bits (291), Expect = 7e-027
Identities = 58/171 (33%), Positives = 92/171 (53%)
Frame = +2
Query: 32 GKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESVSIQN 211
G+RL R + + VPFE+ + + L+DL + +GE VN L + PDE+VS+ +
Sbjct: 238 GRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNS 297
Query: 212 PRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREHKER 391
PRD L++ + ++P + E N+ F RF E + S++FD + L + R
Sbjct: 298 PRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCR 357
Query: 392 INVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSSII 544
VE+ + R+ +++IACEG ER R E +W+ R + AGF P LS I
Sbjct: 358 TLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQI 408
>TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription factor family
protein | chr3:17158052-17159799 FORWARD
Length = 552
Score = 117 bits (291), Expect = 7e-027
Identities = 58/171 (33%), Positives = 92/171 (53%)
Frame = +2
Query: 32 GKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESVSIQN 211
G+RL R + + VPFE+ + + L+DL + +GE VN L + PDE+VS+ +
Sbjct: 336 GRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNS 395
Query: 212 PRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREHKER 391
PRD L++ + ++P + E N+ F RF E + S++FD + L + R
Sbjct: 396 PRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCR 455
Query: 392 INVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSSII 544
VE+ + R+ +++IACEG ER R E +W+ R + AGF P LS I
Sbjct: 456 TLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQI 506
>TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcription factor 9
(SCL9) | chr2:15792623-15794779 FORWARD
Length = 719
Score = 116 bits (289), Expect = 1e-026
Identities = 60/174 (34%), Positives = 93/174 (53%)
Frame = +2
Query: 32 GKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESVSIQN 211
G+RL+ A+ + VPFE+ A +QLEDL + E VN + ++ DESV +++
Sbjct: 502 GQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVES 561
Query: 212 PRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREHKER 391
RD +L ++ ++P + N F RF E +FS++FD ++ +PRE +ER
Sbjct: 562 CRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEER 621
Query: 392 INVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSSIINAT 553
+ +E RE +N+IACEG ERVER E +W R + +G P I T
Sbjct: 622 MFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKT 675
>TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1);
transcription factor | chr1:24748327-24749862 FORWARD
Length = 512
Score = 115 bits (287), Expect = 2e-026
Identities = 67/176 (38%), Positives = 110/176 (62%), Gaps = 10/176 (5%)
Frame = +2
Query: 17 DVALVGKRLSRLAESYKVPFEFHAAGI-SASEVQLEDLGVQTG-EALAVNFAFMLHHMPD 190
D+ VG +L +LA + V FEF + + + S+++ E L ++ G E++AVN F LH +
Sbjct: 295 DIQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLA 354
Query: 191 ESVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVAL 370
SI D+ L +KS+ P ++T+VEQE+N N F RF E+ Y+S++FDS++
Sbjct: 355 HPGSI----DKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLE--- 407
Query: 371 PREHKERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSS 538
++R+ + + L R+I+N++ACEG +RVER E L++WR+RF + GF P + S
Sbjct: 408 GPPSQDRV-MSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGS 462
>TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription factor family
protein | chr1:2309718-2311805 REVERSE
Length = 696
Score = 109 bits (272), Expect = 1e-024
Identities = 58/171 (33%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Frame = +2
Query: 32 GKRLSRLAESYKVPFEFHA-AGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESVSIQ 208
G+RL+ + + VPFE++A A + +++E+ ++ E LAVN ++ D +
Sbjct: 479 GRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEE 538
Query: 209 N-PRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREHK 385
+ PRD L++++ ++P V + N F RF E ++SA+FD L +E+
Sbjct: 539 DCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENP 598
Query: 386 ERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSS 538
ERI+ E RE++N+IACEGV+RVER E +W+ R I AGF P+ +
Sbjct: 599 ERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEA 649
>TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription
factor | chr3:819636-821279 REVERSE
Length = 548
Score = 107 bits (267), Expect = 4e-024
Identities = 66/172 (38%), Positives = 101/172 (58%), Gaps = 7/172 (4%)
Frame = +2
Query: 29 VGKRLSRLAESYKVPFEFHA-AGISASEVQLEDLGVQ-TGEALAVNFAFMLHHMPDESVS 202
+G +L++ A++ V FEF A S S+++ E + E L VN F LH + S S
Sbjct: 335 LGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGS 394
Query: 203 IQNPRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREH 382
I ++LL VK++ P +VT+VEQE+N N F RF E Y+S++FDS++ +
Sbjct: 395 I----EKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPS 450
Query: 383 KERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSS 538
++R+ E + L R+I+N++A EG +RVER E ++WR R AGF P L S
Sbjct: 451 QDRVMSEVY-LGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGS 501
>TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID
INSENSITIVE); transcription factor | chr1:5149414-5151015 FORWARD
Length = 534
Score = 106 bits (263), Expect = 1e-023
Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 16/176 (9%)
Frame = +2
Query: 29 VGKRLSRLAESYKVPFEFHA------AGISASEVQLEDLGVQTGEALAVNFAFMLHHMPD 190
VG +L+ LAE+ V FE+ A + AS ++L + E++AVN F LH +
Sbjct: 320 VGCKLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEI---ESVAVNSVFELHKLLG 376
Query: 191 ESVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVAL 370
+I D++L VV + P++ T+VEQESN N+ F RF E+ Y+S +FDS++
Sbjct: 377 RPGAI----DKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVP 432
Query: 371 PREHKERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSS 538
+ K V L ++I N++AC+G +RVER E LS+WR+RF AGF+ + S
Sbjct: 433 SGQDKVMSEV---YLGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGS 485
>TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1);
protein binding / transcription factor | chr2:255581-257344 REVERSE
Length = 588
Score = 105 bits (261), Expect = 2e-023
Identities = 66/173 (38%), Positives = 103/173 (59%), Gaps = 10/173 (5%)
Frame = +2
Query: 29 VGKRLSRLAESYKVPFE---FHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESV 199
VG +L++LAE+ V FE F A ++ + + +L EA+AVN F LH +
Sbjct: 372 VGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPG 431
Query: 200 SIQNPRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPRE 379
I +++L VVK + P + T+VEQESN N F RF E+ Y+S +FDS++ +P
Sbjct: 432 GI----EKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLE-GVPNS 486
Query: 380 HKERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSS 538
++++ E + L ++I N++ACEG +RVER E LS+W +RF +G +P L S
Sbjct: 487 -QDKVMSEVY-LGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGS 537
>TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3);
transcription factor | chr5:5764316-5765887 REVERSE
Length = 524
Score = 103 bits (255), Expect = 1e-022
Identities = 64/178 (35%), Positives = 105/178 (58%), Gaps = 7/178 (3%)
Frame = +2
Query: 11 RGDVALVGKRLSRLAESYKVPFEFHAAGIS-ASEVQLEDLGVQT-GEALAVNFAFMLHHM 184
R + +G +L++LA++ V F+F+ S+++ + +T E L VN F LH +
Sbjct: 300 REGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPV 359
Query: 185 PDESVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDV 364
+ SI ++LL VK++ P +VT+VEQE+N N F RF E Y+S++FDS++
Sbjct: 360 LSQPGSI----EKLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLED 415
Query: 365 ALPREHKERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLSS 538
+ ++R+ E + L R+I+N++A EG +R+ER E L++WR R AGF P L S
Sbjct: 416 GVVIPSQDRVMSEVY-LGRQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGS 472
>TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor
| chr1:18678177-18679625 REVERSE
Length = 483
Score = 90 bits (221), Expect = 9e-019
Identities = 45/106 (42%), Positives = 63/106 (59%)
Frame = +2
Query: 218 DRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREHKERIN 397
D L + LSPKV+ + EQ+S+ N + R E+ ++A+FD ++ +PR ++RI
Sbjct: 330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIK 389
Query: 398 VEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLS 535
VE+ EI NII+CEG ER ER E L KW R +AGF PLS
Sbjct: 390 VEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLS 435
>TAIR9_protein||AT1G63100.1 | Symbols: | scarecrow transcription factor family
protein | chr1:23399391-23401367 REVERSE
Length = 659
Score = 88 bits (217), Expect = 3e-018
Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Frame = +2
Query: 32 GKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESVSIQN 211
G RL AE+ + FEFH +V+L L V+ GE++AVN +H +
Sbjct: 432 GDRLHGFAEAMNLQFEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAA- 490
Query: 212 PRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREHKER 391
RD L +++S +P + L EQE+ N+ R + Y+SA+FD+I L + R
Sbjct: 491 IRD-FLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMR 549
Query: 392 INVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGF 517
+ VE+ REI NI+ACEG R ER WR GF
Sbjct: 550 VKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGF 591
>TAIR9_protein||AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW); protein
binding / protein homodimerization/ sequence-specific DNA binding /
transcription factor | chr3:20070550-20072625 FORWARD
Length = 654
Score = 86 bits (210), Expect = 2e-017
Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 8/168 (4%)
Frame = +2
Query: 32 GKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESVSIQN 211
GKRLS A+ +PFEF + E L V+ EA+AV H + +
Sbjct: 447 GKRLSDFADKLGLPFEFCPLAEKVGNLDTERLNVRKREAVAV------HWLQHSLYDVTG 500
Query: 212 PRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREHKER 391
L +++ L+PKVVT+VEQ+ ++ F RF E Y+SA+FDS+ + E +ER
Sbjct: 501 SDAHTLWLLQRLAPKVVTVVEQDL-SHAGSFLGRFVEAIHYYSALFDSLGASYGEESEER 559
Query: 392 INVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGFSPYPLS 535
VEQ L++EI N++A G R + S WR + GF L+
Sbjct: 560 HVVEQQLLSKEIRNVLAVGGPSRSGEVKFES-WREKMQQCGFKGISLA 606
>TAIR9_protein||AT5G66770.1 | Symbols: | scarecrow transcription factor family
protein | chr5:26660723-26662477 FORWARD
Length = 585
Score = 86 bits (210), Expect = 2e-017
Identities = 60/171 (35%), Positives = 85/171 (49%), Gaps = 6/171 (3%)
Frame = +2
Query: 32 GKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESVSIQN 211
G RL A+ + F+F + V E LAVNF L+ + DE+ +I
Sbjct: 373 GNRLRDFAKVLDLNFDFIPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIV- 431
Query: 212 PRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREHKER 391
D LR+ KSL+P+VVTL E E + N F R ++SAVF+S++ L R+ +ER
Sbjct: 432 --DTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEER 489
Query: 392 INVEQHCLAREIVNIIACE--GVERVERTELLSKWRSRFIMAGFSPYPLSS 538
+ VE+ R I +I E G+ R ER E +WR AGF LS+
Sbjct: 490 VRVERELFGRRISGLIGPEKTGIHR-ERMEEKEQWRVLMENAGFESVKLSN 539
>TAIR9_protein||AT5G41920.1 | Symbols: | scarecrow transcription factor family
protein | chr5:16779982-16781199 FORWARD
Length = 406
Score = 80 bits (197), Expect = 6e-016
Identities = 54/149 (36%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
Frame = +2
Query: 20 VALVGKRLSRLAESYKVPFEFH-AAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDES 196
+A G+RL+ A S +PFEFH GI + + L + GEA+ V+ +M H + D
Sbjct: 194 LASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVH--WMQHRLYD-- 249
Query: 197 VSIQNPRDRLLRVVKSLSPKVVTLVEQE-SNTNTAPFCPRFAETFSYFSAVFDSIDVALP 373
+ L +++ L P ++T+VEQE S + F RF E Y+SA+FD++ L
Sbjct: 250 --VTGNNLETLEILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLG 307
Query: 374 REHKERINVEQHCLAREIVNIIACEGVER 460
E ER VEQ L EI NI+A G R
Sbjct: 308 EESGERFTVEQIVLGTEIRNIVAHGGGRR 336
>TAIR9_protein||AT3G50650.1 | Symbols: | scarecrow-like transcription factor 7
(SCL7) | chr3:18806472-18808100 REVERSE
Length = 543
Score = 76 bits (186), Expect = 1e-014
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Frame = +2
Query: 32 GKRLSRLAESYKVPFEFHAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPDESVSIQN 211
G RL A + FEF+ + V E L VNF L+ + DE+ +
Sbjct: 327 GNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVLVVNFMLELYKLLDETATTVG 386
Query: 212 PRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDVALPREHKER 391
LR+ +SL+P++VTL E E + N F R + ++SAVF+S++ L R+ KER
Sbjct: 387 ---TALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSAVFESLEPNLDRDSKER 443
Query: 392 INVEQHCLAREIVNIIACEGVERVERT-----ELLSKWRSRFIMAGFSP 523
+ VE+ R I++++ + T E +WR AGF P
Sbjct: 444 LRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLMEKAGFEP 492
>TAIR9_protein||AT3G49950.1 | Symbols: | scarecrow transcription factor family
protein | chr3:18522570-18523802 FORWARD
Length = 411
Score = 75 bits (184), Expect = 2e-014
Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 12/171 (7%)
Frame = +2
Query: 29 VGKRLSRLAESYKVPFEF------HAAGISASEVQLEDLGVQTGEALAVNFAFMLHHMPD 190
+G +L A + + EF ++ G S+ QL EAL VN ML ++P+
Sbjct: 191 LGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPE 250
Query: 191 ESV--SIQNPRDRLLRVVKSLSPKVVTLVEQESNTNTAPFCPRFAETFSYFSAVFDSIDV 364
E + S + R L+ ++SL+P++VTL+E++ + + R F+YF FD+ D
Sbjct: 251 EPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDT 310
Query: 365 ALPREHKERINVEQHCLAREIVNIIACEGVERVERTELLSKWRSRFIMAGF 517
+ E + E ++ +I N++A EG ERVERTE +W R A F
Sbjct: 311 FM-SEQRRWYEAE---ISWKIENVVAKEGAERVERTETKRRWIERMREAEF 357
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,031,423,600
Number of Sequences: 33410
Number of Extensions: 4031423600
Number of Successful Extensions: 224022325
Number of sequences better than 0.0: 0
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