BLASTX 7.6.2
Query= RU23539 /QuerySize=508
(507 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G38630.1 | Symbols: RPN10, MCB1, ATMCB1, MBP1 ... 130 7e-031
>TAIR9_protein||AT4G38630.1 | Symbols: RPN10, MCB1, ATMCB1, MBP1 | RPN10
(REGULATORY PARTICLE NON-ATPASE 10); peptide receptor |
chr4:18057357-18059459 REVERSE
Length = 387
Score = 130 bits (325), Expect = 7e-031
Identities = 70/135 (51%), Positives = 84/135 (62%), Gaps = 3/135 (2%)
Frame = +1
Query: 106 LKHRQNKKQQQRIIVFAGSVVKHEKKTLEMIGRKLKKNSVALDIINFGXXXXXXX-XXXX 282
LKHRQNK Q+QRIIVFAGS +K+EKK LE++G++LKKNSV+LDI+NFG
Sbjct: 98 LKHRQNKNQRQRIIVFAGSPIKYEKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLE 157
Query: 283 XXXXXVNNNDTSHIVHVPAGPSALSDVLISTPIFTXXXXXXXXXXXXXXXXXXXXXXXXX 462
VNNND SHIVHVP+G +ALSDVL+STP+FT
Sbjct: 158 ALLTAVNNNDGSHIVHVPSGANALSDVLLSTPVFT--GDEGASGYVSAAAAAAAAGGDFD 215
Query: 463 XXXXPNLDPELALAL 507
PN+DPELALAL
Sbjct: 216 FGVDPNIDPELALAL 230
Score = 63 bits (152), Expect = 8e-011
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +3
Query: 3 TPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLA 104
TPTSDLGKILACMHGL++GGE+NL A IQ+AQLA
Sbjct: 64 TPTSDLGKILACMHGLDVGGEINLTAAIQIAQLA 97
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,059,965,137
Number of Sequences: 33410
Number of Extensions: 4059965137
Number of Successful Extensions: 224407966
Number of sequences better than 0.0: 0
|