BLASTX 7.6.2
Query= RU23666 /QuerySize=710
(709 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G02080.1 | Symbols: | 40S ribosomal protein S... 242 3e-064
TAIR9_protein||AT5G15520.1 | Symbols: | 40S ribosomal protein S... 242 3e-064
TAIR9_protein||AT5G61170.1 | Symbols: | 40S ribosomal protein S... 241 5e-064
>TAIR9_protein||AT3G02080.1 | Symbols: | 40S ribosomal protein S19 (RPS19A) |
chr3:364138-365161 REVERSE
Length = 144
Score = 242 bits (615), Expect = 3e-064
Identities = 117/139 (84%), Positives = 125/139 (89%)
Frame = +2
Query: 65 MATAKTVKDVSPHEFVKHYAAHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYIRAAS 244
MAT KTVKDVSPH+FVK YA+HLKRSGKIELP WTDIVKT KELAPYDPDWYYIRAAS
Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAAS 60
Query: 245 MARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLAEVKIVEIDPKG 424
MARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG IARHILQQL + IVE+D KG
Sbjct: 61 MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKG 120
Query: 425 GRRITSNC*LDLDQVAGRI 481
GRRITS+ DLDQVAGRI
Sbjct: 121 GRRITSSGQRDLDQVAGRI 139
>TAIR9_protein||AT5G15520.1 | Symbols: | 40S ribosomal protein S19 (RPS19B) |
chr5:5037242-5038136 REVERSE
Length = 144
Score = 242 bits (615), Expect = 3e-064
Identities = 118/139 (84%), Positives = 125/139 (89%)
Frame = +2
Query: 65 MATAKTVKDVSPHEFVKHYAAHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYIRAAS 244
MAT KTVKDVSPH+FVK YA+HLKRSGKIELP WTDIVKT KELAPYDPDWYYIRAAS
Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAAS 60
Query: 245 MARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLAEVKIVEIDPKG 424
MARKIYLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG IARHILQQL + IVE+D KG
Sbjct: 61 MARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKG 120
Query: 425 GRRITSNC*LDLDQVAGRI 481
GRRITS+ DLDQVAGRI
Sbjct: 121 GRRITSSGQRDLDQVAGRI 139
>TAIR9_protein||AT5G61170.1 | Symbols: | 40S ribosomal protein S19 (RPS19C) |
chr5:24611158-24612202 FORWARD
Length = 144
Score = 241 bits (613), Expect = 5e-064
Identities = 116/139 (83%), Positives = 125/139 (89%)
Frame = +2
Query: 65 MATAKTVKDVSPHEFVKHYAAHLKRSGKIELPHWTDIVKTATFKELAPYDPDWYYIRAAS 244
MAT KTVKDVSPHEFVK YAAHLKRSGKIELP WTDIVKT KELAPYDPDWYYIRAAS
Sbjct: 1 MATGKTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAAS 60
Query: 245 MARKIYLRGGLGVGAFKRIYGGSKRNGSRPPHFCESSGAIARHILQQLAEVKIVEIDPKG 424
MARK+YLRGGLGVGAF+RIYGGSKRNGSRPPHFC+SSG +ARHILQQL + IV++D KG
Sbjct: 61 MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKG 120
Query: 425 GRRITSNC*LDLDQVAGRI 481
GR+ITS+ DLDQVAGRI
Sbjct: 121 GRKITSSGQRDLDQVAGRI 139
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,087,783,227
Number of Sequences: 33410
Number of Extensions: 4087783227
Number of Successful Extensions: 224564999
Number of sequences better than 0.0: 0
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