BLASTX 7.6.2
Query= RU23704 /QuerySize=1103
(1102 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G47890.1 | Symbols: | zinc finger (B-box type... 82 5e-016
TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type... 73 3e-013
TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type... 73 3e-013
TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type... 69 5e-012
TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like... 65 5e-011
TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 61 1e-009
TAIR9_protein||AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 61 1e-009
TAIR9_protein||AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 61 1e-009
TAIR9_protein||AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 61 1e-009
TAIR9_protein||AT2G47890.2 | Symbols: | zinc finger (B-box type... 60 2e-009
TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger... 60 3e-009
TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger... 60 3e-009
TAIR9_protein||AT5G48250.1 | Symbols: | zinc finger (B-box type... 60 3e-009
TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast... 59 6e-009
TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (const... 58 1e-008
TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONST... 57 2e-008
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 57 2e-008
TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type... 56 3e-008
TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type... 56 3e-008
TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type... 56 3e-008
TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABI... 55 5e-008
TAIR9_protein||AT3G21880.1 | Symbols: | zinc finger (B-box type... 55 9e-008
TAIR9_protein||AT1G05290.1 | Symbols: | transcription factor | ... 54 2e-007
TAIR9_protein||AT4G15250.1 | Symbols: | zinc finger (B-box type... 54 2e-007
TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST I... 53 3e-007
TAIR9_protein||AT1G07050.1 | Symbols: | CONSTANS-like protein-r... 52 6e-007
TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type... 52 6e-007
TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type... 52 6e-007
TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-... 51 1e-006
>TAIR9_protein||AT2G47890.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:19608245-19609476 FORWARD
Length = 333
Score = 82 bits (201), Expect = 5e-016
Identities = 41/50 (82%), Positives = 46/50 (92%), Gaps = 1/50 (2%)
Frame = -3
Query: 488 SHEC-TLNRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
+HE +L R SALSRYKEKKK+RRY+KHIRYESRKVRAESRTRI+GRFAK
Sbjct: 279 THEINSLERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAK 328
Score = 60 bits (144), Expect = 2e-009
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Frame = -3
Query: 1001 LVWETP--XXXXXXXXXXXXPAHKFQAMGVPPLPKNRNAKCGRHKEEILSQLRVVAKSEP 828
L+WE+P H F+A VPPLPKNR+A CG++K+E++ QLR +++SEP
Sbjct: 123 LLWESPEIVSLNDLIVSGGSGTHNFRATDVPPLPKNRHATCGKYKDEMIRQLRGLSRSEP 182
Query: 827 NLM---NEDIDLNSFMRFQSPE 771
+ D ++++ +F +P+
Sbjct: 183 GCLKFETPDAEIDAGFQFLAPD 204
>TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 403
Score = 73 bits (178), Expect = 3e-013
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = -3
Query: 578 SNNDGTASHASDGFGGQMN-SEASSAFPKVPSHECTLNRESALSRYKEKKKTRRYDKHIR 402
S+ND H ++ N + A + NR++A+ RYKEKKKTRRYDK IR
Sbjct: 319 SSNDSCGLHCTEHIAITSNRATRLVAVTNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIR 378
Query: 401 YESRKVRAESRTRIKGRFAK 342
YE+RK RAE+R R+KGRF K
Sbjct: 379 YETRKARAETRLRVKGRFVK 398
>TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 402
Score = 73 bits (178), Expect = 3e-013
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = -3
Query: 578 SNNDGTASHASDGFGGQMN-SEASSAFPKVPSHECTLNRESALSRYKEKKKTRRYDKHIR 402
S+ND H ++ N + A + NR++A+ RYKEKKKTRRYDK IR
Sbjct: 318 SSNDSCGLHCTEHIAITSNRATRLVAVTNADLEQMAQNRDNAMQRYKEKKKTRRYDKTIR 377
Query: 401 YESRKVRAESRTRIKGRFAK 342
YE+RK RAE+R R+KGRF K
Sbjct: 378 YETRKARAETRLRVKGRFVK 397
>TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:9775768-9777657 REVERSE
Length = 434
Score = 69 bits (167), Expect = 5e-012
Identities = 34/78 (43%), Positives = 44/78 (56%)
Frame = -3
Query: 575 NNDGTASHASDGFGGQMNSEASSAFPKVPSHECTLNRESALSRYKEKKKTRRYDKHIRYE 396
+N + H ++ G K NR A+ RYKEK+KTRRYDK IRYE
Sbjct: 349 SNSSSDLHFTEHIAGTSCKTTRLVATKADLERLAQNRGDAMQRYKEKRKTRRYDKTIRYE 408
Query: 395 SRKVRAESRTRIKGRFAK 342
SRK RA++R R++GRF K
Sbjct: 409 SRKARADTRLRVRGRFVK 426
>TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2);
transcription factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 348
Score = 65 bits (158), Expect = 5e-011
Identities = 44/113 (38%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Frame = -3
Query: 680 SEANHYHKSSSQDFFPKTLQRSYLQDCSMVPDLNSNNDGTASHASDGFGGQMNSEASSAF 501
S HY+ +S +D S D S+VP+ ++ +D T H + + S
Sbjct: 212 SSGAHYNNNSLKDLNHSASVSS--MDISVVPE-STASDITVQHPRT--TKETIDQLSGPP 266
Query: 500 PKVPSHECTLNRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
+V + RE+ + RY+EKKKTR++DK IRY SRK AE R RIKGRFAK
Sbjct: 267 TQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
>TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 61 bits (147), Expect = 1e-009
Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Frame = -3
Query: 488 SHECTLNRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
SH T R +A+ RYKEKKK R++DK +RY SRK RA+ R R+KGRF K
Sbjct: 310 SHSVT--RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVK 356
>TAIR9_protein||AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 61 bits (147), Expect = 1e-009
Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Frame = -3
Query: 488 SHECTLNRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
SH T R +A+ RYKEKKK R++DK +RY SRK RA+ R R+KGRF K
Sbjct: 310 SHSVT--RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVK 356
>TAIR9_protein||AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 61 bits (147), Expect = 1e-009
Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Frame = -3
Query: 488 SHECTLNRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
SH T R +A+ RYKEKKK R++DK +RY SRK RA+ R R+KGRF K
Sbjct: 310 SHSVT--RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVK 356
>TAIR9_protein||AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 61 bits (147), Expect = 1e-009
Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Frame = -3
Query: 488 SHECTLNRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
SH T R +A+ RYKEKKK R++DK +RY SRK RA+ R R+KGRF K
Sbjct: 310 SHSVT--RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKGRFVK 356
>TAIR9_protein||AT2G47890.2 | Symbols: | zinc finger (B-box type) family
protein | chr2:19608245-19609036 FORWARD
Length = 238
Score = 60 bits (144), Expect = 2e-009
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Frame = -3
Query: 1001 LVWETP--XXXXXXXXXXXXPAHKFQAMGVPPLPKNRNAKCGRHKEEILSQLRVVAKSEP 828
L+WE+P H F+A VPPLPKNR+A CG++K+E++ QLR +++SEP
Sbjct: 123 LLWESPEIVSLNDLIVSGGSGTHNFRATDVPPLPKNRHATCGKYKDEMIRQLRGLSRSEP 182
Query: 827 NLM---NEDIDLNSFMRFQSPE 771
+ D ++++ +F +P+
Sbjct: 183 GCLKFETPDAEIDAGFQFLAPD 204
>TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type)
family protein | chr5:23355573-23356729 FORWARD
Length = 356
Score = 60 bits (143), Expect = 3e-009
Identities = 27/45 (60%), Positives = 37/45 (82%)
Frame = -3
Query: 476 TLNRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
+++RE+ + RY+EK+K R+++K IRY SRK AESR RIKGRFAK
Sbjct: 282 SMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAK 326
>TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 407
Score = 60 bits (143), Expect = 3e-009
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Frame = -3
Query: 605 DCSMVPDLNSNNDGTASHASDGFGGQMNSEASSAFPK-VPSHECTLNRESALSRYKEKKK 429
+ +VPD G+ + S +GG S A + VP + RE+ + RY+EK+K
Sbjct: 299 EVGVVPD-----GGSVADVSYPYGGPATSGADPGTQRAVPL--TSAEREARVMRYREKRK 351
Query: 428 TRRYDKHIRYESRKVRAESRTRIKGRFAK 342
R+++K IRY SRK AE R RIKGRFAK
Sbjct: 352 NRKFEKTIRYASRKAYAEMRPRIKGRFAK 380
>TAIR9_protein||AT5G48250.1 | Symbols: | zinc finger (B-box type) family
protein | chr5:19561719-19563113 REVERSE
Length = 374
Score = 60 bits (143), Expect = 3e-009
Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Frame = -3
Query: 488 SHECTLNRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
SH T R +A+ RYKEKKK R++DK +RY SRK RA+ R R+KGRF K
Sbjct: 311 SHATT--RNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVKGRFVK 357
>TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis
thaliana protein match is: CIL (TAIR:AT4G25990.1); Has 1815 Blast hits
to 1506 proteins in 139 species: Archae - 0; Bacteria - 8; Metazoa -
291; Fungi - 53; Plants - 1145; Viruses - 0; Other Eukaryotes - 318
(source: NCBI BLink). | chr5:4632147-4633651 REVERSE
Length = 340
Score = 59 bits (140), Expect = 6e-009
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 16/89 (17%)
Frame = -3
Query: 593 VPDLNSNNDGTASHASDGFGGQMNSEASSAFPKVPSHECTL-----NRESALSRYKEKKK 429
VPDL+++ DG +DG EA + + VP E T +RE++L RYKEK++
Sbjct: 258 VPDLHASADG----FNDG------GEAGNLW-AVPEMETTERLWRGHREASLLRYKEKRQ 306
Query: 428 TRRYDKHIRYESRKVRAESRTRIKGRFAK 342
R + K IRY+ RK+ AE R R+KGRF K
Sbjct: 307 NRLFSKRIRYQVRKLNAEKRPRVKGRFVK 335
>TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1);
transcription factor/ zinc ion binding | chr5:5176297-5177473 REVERSE
Length = 356
Score = 58 bits (138), Expect = 1e-008
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = -3
Query: 470 NRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
+RE+ + RY+EKKK R+++K IRY SRK AE R RIKGRFAK
Sbjct: 285 DREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAK 327
>TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567946 FORWARD
Length = 295
Score = 57 bits (136), Expect = 2e-008
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = -3
Query: 548 SDGFGGQMNSEASSAFPKVPSHECTLNRESALSRYKEKKKTRRYDKHIRYESRKVRAESR 369
S G +M + + A P+ RE+ + RY+EK+K R+++K IRY SRK AE R
Sbjct: 207 SGGVTAEMTNTETPAVQLSPA-----EREARVLRYREKRKNRKFEKTIRYASRKAYAEMR 261
Query: 368 TRIKGRFAK 342
RIKGRFAK
Sbjct: 262 PRIKGRFAK 270
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 57 bits (135), Expect = 2e-008
Identities = 25/44 (56%), Positives = 35/44 (79%)
Frame = -3
Query: 473 LNRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
++RE+ + RY+EK+KTR+++K IRY SRK AE R R+ GRFAK
Sbjct: 304 MDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAK 347
>TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:27779214-27780522 FORWARD
Length = 393
Score = 56 bits (134), Expect = 3e-008
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = -3
Query: 467 RESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
RE+ + RYKEK++TR + K IRYE RK+ AE R RIKGRF K
Sbjct: 345 REARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVK 386
>TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:8933939-8935284 REVERSE
Length = 418
Score = 56 bits (134), Expect = 3e-008
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = -3
Query: 467 RESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
RE+ +SRY+EK++TR + K IRYE RK+ AE R R+KGRF K
Sbjct: 361 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 402
>TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:25709331-25710749 REVERSE
Length = 407
Score = 56 bits (134), Expect = 3e-008
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = -3
Query: 467 RESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
RE+ +SRY+EK++TR + K IRYE RK+ AE R R+KGRF K
Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVK 398
>TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component
response regulator | chr5:8356204-8358873 REVERSE
Length = 668
Score = 55 bits (132), Expect = 5e-008
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Frame = -3
Query: 701 PAYEAQESEANHYHKSSSQDFFPKTLQRSYLQDCSMVPDLNSNNDGTASHAS-----DGF 537
P+ + ++ +H +S+ P+ LQ +DCSM D H++ D
Sbjct: 543 PSSVSPHEYSSMFHPFNSK---PEGLQD---RDCSMDVDERRYVSSATEHSAIGNHIDQL 596
Query: 536 GGQMNSEASSAFPKVPSHECTLNRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIK 357
+ N + S V + +L RE+AL++++ K+K R Y+K +RYESRK AE R RIK
Sbjct: 597 IEKKNEDGYSL--SVGKIQQSLQREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIK 654
Query: 356 GRFAK 342
G+F +
Sbjct: 655 GQFVR 659
>TAIR9_protein||AT3G21880.1 | Symbols: | zinc finger (B-box type) family
protein | chr3:7706748-7708093 FORWARD
Length = 365
Score = 55 bits (130), Expect = 9e-008
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = -3
Query: 590 PDLNSNNDGTASHASDGFGGQMNSEASSAFPKVPSHE--CTLNRESALSRYKEKKKTRRY 417
P LN + A+ D G S P + E C R A RYKEKK R +
Sbjct: 266 PSLNITGENNAADYQD--CGMSPGFIMSEAPWETNFEVSCPQARNEAKLRYKEKKLKRSF 323
Query: 416 DKHIRYESRKVRAESRTRIKGRFAK 342
K IRY SRK RA++R R+KGRF K
Sbjct: 324 GKQIRYASRKARADTRKRVKGRFVK 348
>TAIR9_protein||AT1G05290.1 | Symbols: | transcription factor |
chr1:1539152-1540546 REVERSE
Length = 370
Score = 54 bits (128), Expect = 2e-007
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = -3
Query: 470 NRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
+RE A RY EKKK R++ K IRYESRK A+++ R+KGRF K
Sbjct: 306 DREEAKKRYFEKKKKRKFGKQIRYESRKSTADTKKRMKGRFTK 348
>TAIR9_protein||AT4G15250.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:8709942-8711106 REVERSE
Length = 331
Score = 54 bits (128), Expect = 2e-007
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = -3
Query: 467 RESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
R+ A RYK+KK R + K IRY SRK RA++R R+KGRF K
Sbjct: 276 RDEAKKRYKQKKSKRMFGKQIRYASRKARADTRKRVKGRFVK 317
>TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170763 FORWARD
Length = 436
Score = 53 bits (126), Expect = 3e-007
Identities = 23/45 (51%), Positives = 34/45 (75%)
Frame = -3
Query: 467 RESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAKIDN 333
RE+++ RYKEK++TR + K IRY+ RK+ A+ R R+KGRF + N
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRRPN 427
>TAIR9_protein||AT1G07050.1 | Symbols: | CONSTANS-like protein-related |
chr1:2164327-2165133 REVERSE
Length = 196
Score = 52 bits (123), Expect = 6e-007
Identities = 22/44 (50%), Positives = 33/44 (75%)
Frame = -3
Query: 473 LNRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
+ RE+++ RYKEK+++R + K IRY+ RK+ A+ R R KGRF K
Sbjct: 149 MRREASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVK 192
>TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175936 REVERSE
Length = 327
Score = 52 bits (123), Expect = 6e-007
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = -3
Query: 500 PKVPSHECTLNRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
P + RE+ + RY++K+K R ++K IRYE RKV A+ R R+KGRF +
Sbjct: 267 PGIEEKRVRSEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVR 319
>TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175811 REVERSE
Length = 320
Score = 52 bits (123), Expect = 6e-007
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = -3
Query: 500 PKVPSHECTLNRESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAK 342
P + RE+ + RY++K+K R ++K IRYE RKV A+ R R+KGRF +
Sbjct: 260 PGIEEKRVRSEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVR 312
>TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-13193543
REVERSE
Length = 395
Score = 51 bits (121), Expect = 1e-006
Identities = 22/45 (48%), Positives = 33/45 (73%)
Frame = -3
Query: 467 RESALSRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAKIDN 333
RE+++ RYKEK++ R + K IRY+ RK+ A+ R R+KGRF + N
Sbjct: 341 REASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFVRRPN 385
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,087,783,227
Number of Sequences: 33410
Number of Extensions: 4087783227
Number of Successful Extensions: 224564999
Number of sequences better than 0.0: 0
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