BLASTX 7.6.2
Query= RU23740 /QuerySize=761
(760 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G52740.1 | Symbols: HTA9 | HTA9 (HISTONE H2A P... 236 2e-062
TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding... 224 5e-059
TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 217 6e-057
TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 217 6e-057
TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 217 6e-057
TAIR9_protein||AT4G13570.1 | Symbols: HTA4 | HTA4; DNA binding |... 134 7e-032
TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding... 128 5e-030
TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding... 127 7e-030
TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding... 126 1e-029
TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A);... 126 2e-029
TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTA... 126 2e-029
TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA... 124 6e-029
TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7... 124 7e-029
TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA... 122 2e-028
TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |... 118 5e-027
>TAIR9_protein||AT1G52740.1 | Symbols: HTA9 | HTA9 (HISTONE H2A PROTEIN 9); DNA
binding | chr1:19645409-19646221 FORWARD
Length = 135
Score = 236 bits (600), Expect = 2e-062
Identities = 119/135 (88%), Positives = 128/135 (94%)
Frame = -2
Query: 600 MSGKGAKGLITGKGASNNKDKDKKKPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGATA 421
MSGKGAKGLI GK + ++KDKDKKKP +RSSRAGLQFPVGR+HRLLK R+TA+GRVGATA
Sbjct: 1 MSGKGAKGLIMGKPSGSDKDKDKKKPITRSSRAGLQFPVGRVHRLLKTRSTAHGRVGATA 60
Query: 420 AVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVI 241
AVY+AAILEYLTAEVLELAGNASKDLKVKRI+PRHLQLAIRGDEELDTLIKGTIAGGGVI
Sbjct: 61 AVYTAAILEYLTAEVLELAGNASKDLKVKRISPRHLQLAIRGDEELDTLIKGTIAGGGVI 120
Query: 240 PHIHKSLINKSTKE* 196
PHIHKSLINKS KE*
Sbjct: 121 PHIHKSLINKSAKE* 135
>TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding |
chr3:20196532-20197466 FORWARD
Length = 137
Score = 224 bits (570), Expect = 5e-059
Identities = 114/137 (83%), Positives = 125/137 (91%), Gaps = 2/137 (1%)
Frame = -2
Query: 600 MSGKGAKGLITGK--GASNNKDKDKKKPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGA 427
M+GKG KGL+ K A+ +KDKDKKKP SRS+RAG+QFPVGRIHR LK R +A+GRVGA
Sbjct: 1 MAGKGGKGLVAAKTMAANKDKDKDKKKPISRSARAGIQFPVGRIHRQLKTRVSAHGRVGA 60
Query: 426 TAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 247
TAAVY+A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG
Sbjct: 61 TAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 120
Query: 246 VIPHIHKSLINKSTKE* 196
VIPHIHKSLINK+TKE*
Sbjct: 121 VIPHIHKSLINKTTKE* 137
>TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 217 bits (552), Expect = 6e-057
Identities = 112/137 (81%), Positives = 122/137 (89%), Gaps = 2/137 (1%)
Frame = -2
Query: 600 MSGKGAKGLITGK--GASNNKDKDKKKPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGA 427
M+GKG KGL+ K A+ NKD KKK SRSSRAG+QFPVGRIHR LKQR +A+GRVGA
Sbjct: 1 MAGKGGKGLLAAKTTAAAANKDSVKKKSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGA 60
Query: 426 TAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 247
TAAVY+A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG
Sbjct: 61 TAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 120
Query: 246 VIPHIHKSLINKSTKE* 196
VIPHIHKSL+NK TK+*
Sbjct: 121 VIPHIHKSLVNKVTKD* 137
>TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 217 bits (552), Expect = 6e-057
Identities = 112/137 (81%), Positives = 122/137 (89%), Gaps = 2/137 (1%)
Frame = -2
Query: 600 MSGKGAKGLITGK--GASNNKDKDKKKPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGA 427
M+GKG KGL+ K A+ NKD KKK SRSSRAG+QFPVGRIHR LKQR +A+GRVGA
Sbjct: 1 MAGKGGKGLLAAKTTAAAANKDSVKKKSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGA 60
Query: 426 TAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 247
TAAVY+A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG
Sbjct: 61 TAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 120
Query: 246 VIPHIHKSLINKSTKE* 196
VIPHIHKSL+NK TK+*
Sbjct: 121 VIPHIHKSLVNKVTKD* 137
>TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 217 bits (552), Expect = 6e-057
Identities = 112/137 (81%), Positives = 122/137 (89%), Gaps = 2/137 (1%)
Frame = -2
Query: 600 MSGKGAKGLITGK--GASNNKDKDKKKPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGA 427
M+GKG KGL+ K A+ NKD KKK SRSSRAG+QFPVGRIHR LKQR +A+GRVGA
Sbjct: 1 MAGKGGKGLLAAKTTAAAANKDSVKKKSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGA 60
Query: 426 TAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 247
TAAVY+A+ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG
Sbjct: 61 TAAVYTASILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGG 120
Query: 246 VIPHIHKSLINKSTKE* 196
VIPHIHKSL+NK TK+*
Sbjct: 121 VIPHIHKSLVNKVTKD* 137
>TAIR9_protein||AT4G13570.1 | Symbols: HTA4 | HTA4; DNA binding |
chr4:7884516-7885664 FORWARD
Length = 119
Score = 134 bits (336), Expect = 7e-032
Identities = 68/91 (74%), Positives = 73/91 (80%)
Frame = -2
Query: 501 GLQFPVGRIHRLLKQRTTANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITP 322
G F V RIH+ LK R +A+ VGAT VY +ILEYLT EVL+LA N SKDLKVKRITP
Sbjct: 28 GEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITP 87
Query: 321 RHLQLAIRGDEELDTLIKGTIAGGGVIPHIH 229
RHLQLAIRGDEELDTLIKGTI GG VIPHIH
Sbjct: 88 RHLQLAIRGDEELDTLIKGTIIGGSVIPHIH 118
>TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding |
chr5:575437-576456 FORWARD
Length = 154
Score = 128 bits (320), Expect = 5e-030
Identities = 75/132 (56%), Positives = 93/132 (70%), Gaps = 9/132 (6%)
Frame = -2
Query: 591 KGAKGLITGKGASNNKDKDKKKPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGATAAVY 412
KGA G +G G KKKP SRS ++GLQFPVGRI R LK+ + RVG A VY
Sbjct: 9 KGAAGRRSGGG-------PKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSK-RVGTGAPVY 60
Query: 411 SAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPH 235
AA+LEYL AEVLELAGNA++D K RI PRH+ LA+R DEEL TL+KG TIA GGV+P+
Sbjct: 61 LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPN 120
Query: 234 IHKSLINKSTKE 199
I+ L+ K +++
Sbjct: 121 INPILLPKKSEK 132
>TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding |
chr1:18926948-18927443 FORWARD
Length = 133
Score = 127 bits (319), Expect = 7e-030
Identities = 71/110 (64%), Positives = 83/110 (75%), Gaps = 2/110 (1%)
Frame = -2
Query: 531 KKPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGATAAVYSAAILEYLTAEVLELAGNAS 352
KK T+RSS+AGLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA+
Sbjct: 14 KKATTRSSKAGLQFPVGRIARFLKKGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAA 72
Query: 351 KDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKST 205
+D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K T
Sbjct: 73 RDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 122
>TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding |
chr3:7229472-7229963 FORWARD
Length = 133
Score = 126 bits (316), Expect = 1e-029
Identities = 71/108 (65%), Positives = 81/108 (75%), Gaps = 2/108 (1%)
Frame = -2
Query: 531 KKPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGATAAVYSAAILEYLTAEVLELAGNAS 352
KK TSRSS+AGLQFPVGRI R LK A RVGA A VY AA+LEYL AEVLELAGNA+
Sbjct: 14 KKSTSRSSKAGLQFPVGRIARFLKNGKYAT-RVGAGAPVYLAAVLEYLAAEVLELAGNAA 72
Query: 351 KDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 211
+D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K
Sbjct: 73 RDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPK 120
>TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A); DNA binding |
chr4:13637515-13638325 REVERSE
Length = 132
Score = 126 bits (315), Expect = 2e-029
Identities = 71/108 (65%), Positives = 81/108 (75%), Gaps = 2/108 (1%)
Frame = -2
Query: 531 KKPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGATAAVYSAAILEYLTAEVLELAGNAS 352
KK TSRSS+AGLQFPVGRI R LK A RVGA A VY AA+LEYL AEVLELAGNA+
Sbjct: 14 KKSTSRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAA 72
Query: 351 KDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 211
+D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K
Sbjct: 73 RDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120
>TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTANT TO
AGROBACTERIUM TRANSFORMATION 5); DNA binding | chr5:22196540-22197279
FORWARD
Length = 131
Score = 126 bits (315), Expect = 2e-029
Identities = 71/108 (65%), Positives = 81/108 (75%), Gaps = 2/108 (1%)
Frame = -2
Query: 531 KKPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGATAAVYSAAILEYLTAEVLELAGNAS 352
KK TSRSS+AGLQFPVGRI R LK A RVGA A VY AA+LEYL AEVLELAGNA+
Sbjct: 14 KKATSRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAA 72
Query: 351 KDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINK 211
+D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH L+ K
Sbjct: 73 RDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPK 120
>TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA-H2AX | H2AXA;
DNA binding | chr1:2847144-2847676 REVERSE
Length = 143
Score = 124 bits (311), Expect = 6e-029
Identities = 72/123 (58%), Positives = 86/123 (69%), Gaps = 6/123 (4%)
Frame = -2
Query: 570 TGKGASNNKDKDKK----KPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGATAAVYSAA 403
TG G+ K K K SRSS+AGLQFPVGRI R LK A RVGA A VY +A
Sbjct: 3 TGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAE-RVGAGAPVYLSA 61
Query: 402 ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHK 226
+LEYL AEVLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH+
Sbjct: 62 VLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 121
Query: 225 SLI 217
+L+
Sbjct: 122 TLL 124
>TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7); DNA binding
| chr5:9792807-9793365 REVERSE
Length = 151
Score = 124 bits (310), Expect = 7e-029
Identities = 71/121 (58%), Positives = 86/121 (71%), Gaps = 2/121 (1%)
Frame = -2
Query: 564 KGASNNKDKDKKKPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGATAAVYSAAILEYLT 385
+GA K D+KK S+S +AGLQFPVGRI R LK+ A R G+ A VY AA+LEYL
Sbjct: 12 RGAGGRKGGDRKKSVSKSVKAGLQFPVGRIARYLKKGRYAL-RYGSGAPVYLAAVLEYLA 70
Query: 384 AEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKS 208
AEVLELAGNA++D K RI PRHL LAIR DEEL L+ G TIA GGV+P+I+ L+ K
Sbjct: 71 AEVLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKK 130
Query: 207 T 205
+
Sbjct: 131 S 131
>TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX |
GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX); DNA binding |
chr1:20414607-20415206 REVERSE
Length = 143
Score = 122 bits (306), Expect = 2e-028
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 6/123 (4%)
Frame = -2
Query: 570 TGKGASNNKDKDKK----KPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGATAAVYSAA 403
+G G+ K K K SRSS+AGLQFPVGRI R LK A RVGA A VY +A
Sbjct: 3 SGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLSA 61
Query: 402 ILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHK 226
+LEYL AEVLELAGNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH+
Sbjct: 62 VLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQ 121
Query: 225 SLI 217
+L+
Sbjct: 122 TLL 124
>TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |
chr5:24115605-24116144 REVERSE
Length = 151
Score = 118 bits (294), Expect = 5e-027
Identities = 67/111 (60%), Positives = 80/111 (72%), Gaps = 2/111 (1%)
Frame = -2
Query: 534 KKKPTSRSSRAGLQFPVGRIHRLLKQRTTANGRVGATAAVYSAAILEYLTAEVLELAGNA 355
K K S+S +AGLQFPVGRI R LK+ A R+G A VY AA+LEYL AEVLELAGNA
Sbjct: 21 KTKSVSKSMKAGLQFPVGRITRFLKKGRYAQ-RLGGGAPVYMAAVLEYLAAEVLELAGNA 79
Query: 354 SKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLINKST 205
++D K RI PRHL LAIR DEEL L+ G TIA GGV+P+I+ L+ K +
Sbjct: 80 ARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKS 130
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,087,783,227
Number of Sequences: 33410
Number of Extensions: 4087783227
Number of Successful Extensions: 224564999
Number of sequences better than 0.0: 0
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