BLASTX 7.6.2
Query= RU23776 /QuerySize=642
(641 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G79990.1 | Symbols: | protein binding / struc... 132 2e-031
TAIR9_protein||AT1G79990.2 | Symbols: | LOCATED IN: endomembran... 130 8e-031
TAIR9_protein||AT1G79990.4 | Symbols: | LOCATED IN: endomembran... 130 8e-031
>TAIR9_protein||AT1G79990.1 | Symbols: | protein binding / structural molecule
| chr1:30084522-30091949 FORWARD
Length = 1136
Score = 132 bits (332), Expect = 2e-031
Identities = 61/104 (58%), Positives = 72/104 (69%), Gaps = 2/104 (1%)
Frame = +2
Query: 2 DYATVTISTVTGWCVIXXXXXXXXXXXXXXXXXIERSKKCLDFSVTLYIVHLFICIGYGG 181
DYAT+T ST TGW VI +ER++KCLDFS TLYI+HLF CI YGG
Sbjct: 50 DYATLTTSTFTGWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGG 109
Query: 182 WPSSITWWVVNGTGIGVMALLGEYLCMRRELQEIKIPTTRYRSN 313
WPSS+ WWVVNGTG+ VMALL EYLC++RE +E IP R+ SN
Sbjct: 110 WPSSMAWWVVNGTGLAVMALLAEYLCIKREQRE--IPMDRFHSN 151
>TAIR9_protein||AT1G79990.2 | Symbols: | LOCATED IN: endomembrane system, COPI
vesicle coat, Golgi membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SYS1
homologue (InterPro:IPR016973); Has 55556 Blast hits to 24059 proteins
in 620 species: Archae - 38; Bacteria - 5697; Metazoa - 25539; Fungi -
10898; Plants - 5309; Viruses - 0; Other Eukaryotes - 8075 (source:
NCBI BLink). | chr1:30084522-30085194 FORWARD
Length = 153
Score = 130 bits (326), Expect = 8e-031
Identities = 60/103 (58%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Frame = +2
Query: 2 DYATVTISTVTGWCVIXXXXXXXXXXXXXXXXXIERSKKCLDFSVTLYIVHLFICIGYGG 181
DYAT+T ST TGW VI +ER++KCLDFS TLYI+HLF CI YGG
Sbjct: 50 DYATLTTSTFTGWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGG 109
Query: 182 WPSSITWWVVNGTGIGVMALLGEYLCMRRELQEIKIPTTRYRS 310
WPSS+ WWVVNGTG+ VMALL EYLC++RE +E IP R+ S
Sbjct: 110 WPSSMAWWVVNGTGLAVMALLAEYLCIKREQRE--IPMDRFHS 150
>TAIR9_protein||AT1G79990.4 | Symbols: | LOCATED IN: endomembrane system, COPI
vesicle coat, Golgi membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SYS1
homologue (InterPro:IPR016973). | chr1:30084522-30085194 FORWARD
Length = 153
Score = 130 bits (326), Expect = 8e-031
Identities = 60/103 (58%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
Frame = +2
Query: 2 DYATVTISTVTGWCVIXXXXXXXXXXXXXXXXXIERSKKCLDFSVTLYIVHLFICIGYGG 181
DYAT+T ST TGW VI +ER++KCLDFS TLYI+HLF CI YGG
Sbjct: 50 DYATLTTSTFTGWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGG 109
Query: 182 WPSSITWWVVNGTGIGVMALLGEYLCMRRELQEIKIPTTRYRS 310
WPSS+ WWVVNGTG+ VMALL EYLC++RE +E IP R+ S
Sbjct: 110 WPSSMAWWVVNGTGLAVMALLAEYLCIKREQRE--IPMDRFHS 150
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,087,783,227
Number of Sequences: 33410
Number of Extensions: 4087783227
Number of Successful Extensions: 224564999
Number of sequences better than 0.0: 0
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