BLASTX 7.6.2
Query= RU23913 /QuerySize=650
(649 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G26840.1 | Symbols: SUM1, SUMO 1, SUMO1, ATSUM... 165 3e-041
TAIR9_protein||AT5G55160.1 | Symbols: SUM2, SUMO 2, SUMO2, ATSUM... 164 7e-041
TAIR9_protein||AT5G55160.2 | Symbols: SUM2, SUMO 2, SUMO2, ATSUM... 131 5e-031
TAIR9_protein||AT5G55170.1 | Symbols: SUM3, SUMO 3, SUMO3, ATSUM... 93 1e-019
TAIR9_protein||AT5G55856.1 | Symbols: | FUNCTIONS IN: molecular... 90 9e-019
TAIR9_protein||AT5G48710.1 | Symbols: | ubiquitin-related | chr... 75 2e-014
TAIR9_protein||AT2G32765.1 | Symbols: SUM5, SUMO5, ATSUMO5 | SUM... 70 7e-013
>TAIR9_protein||AT4G26840.1 | Symbols: SUM1, SUMO 1, SUMO1, ATSUMO1 | SUMO1
(SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag |
chr4:13497466-13498458 FORWARD
Length = 101
Score = 165 bits (416), Expect = 3e-041
Identities = 80/93 (86%), Positives = 86/93 (92%)
Frame = -1
Query: 556 SQPQEEDKKPNHQGAHINLKVKGQEGNQVFFRIKRSTQLKKLMNAYCDPQSVELNSIAFL 377
S QEEDKKP GAHINLKVKGQ+GN+VFFRIKRSTQLKKLMNAYCD QSV++NSIAFL
Sbjct: 2 SANQEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFL 61
Query: 376 FDGRPLRAEQTPDELEMEDGDEIDAMLHQTGGA 278
FDGR LRAEQTPDEL+MEDGDEIDAMLHQTGG+
Sbjct: 62 FDGRRLRAEQTPDELDMEDGDEIDAMLHQTGGS 94
>TAIR9_protein||AT5G55160.1 | Symbols: SUM2, SUMO 2, SUMO2, ATSUMO2 | SUMO2
(SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag |
chr5:22383747-22384772 REVERSE
Length = 104
Score = 164 bits (413), Expect = 7e-041
Identities = 82/95 (86%), Positives = 87/95 (91%), Gaps = 1/95 (1%)
Frame = -1
Query: 556 SQPQEEDKKPNHQGAHINLKVKGQEGNQVFFRIKRSTQLKKLMNAYCDPQSVELNSIAFL 377
S EEDKKP+ QGAHINLKVKGQ+GN+VFFRIKRSTQLKKLMNAYCD QSV+ NSIAFL
Sbjct: 2 SATPEEDKKPD-QGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFL 60
Query: 376 FDGRPLRAEQTPDELEMEDGDEIDAMLHQTGGAAQ 272
FDGR LRAEQTPDELEMEDGDEIDAMLHQTGG A+
Sbjct: 61 FDGRRLRAEQTPDELEMEDGDEIDAMLHQTGGGAK 95
>TAIR9_protein||AT5G55160.2 | Symbols: SUM2, SUMO 2, SUMO2, ATSUMO2 | SUMO2
(SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag |
chr5:22383747-22384772 REVERSE
Length = 117
Score = 131 bits (328), Expect = 5e-031
Identities = 63/71 (88%), Positives = 67/71 (94%)
Frame = -1
Query: 484 EGNQVFFRIKRSTQLKKLMNAYCDPQSVELNSIAFLFDGRPLRAEQTPDELEMEDGDEID 305
+GN+VFFRIKRSTQLKKLMNAYCD QSV+ NSIAFLFDGR LRAEQTPDELEMEDGDEID
Sbjct: 38 DGNEVFFRIKRSTQLKKLMNAYCDRQSVDFNSIAFLFDGRRLRAEQTPDELEMEDGDEID 97
Query: 304 AMLHQTGGAAQ 272
AMLHQTGG A+
Sbjct: 98 AMLHQTGGGAK 108
>TAIR9_protein||AT5G55170.1 | Symbols: SUM3, SUMO 3, SUMO3, ATSUMO3 | SUMO3
(SMALL UBIQUITIN-LIKE MODIFIER 3); protein binding / protein tag |
chr5:22385468-22386071 REVERSE
Length = 112
Score = 93 bits (230), Expect = 1e-019
Identities = 44/92 (47%), Positives = 63/92 (68%)
Frame = -1
Query: 556 SQPQEEDKKPNHQGAHINLKVKGQEGNQVFFRIKRSTQLKKLMNAYCDPQSVELNSIAFL 377
S PQ++ Q AH+ LKVK Q+G++V F+ K+S LKKLM YCD + ++L++ AF+
Sbjct: 2 SNPQDDKPIDQEQEAHVILKVKSQDGDEVLFKNKKSAPLKKLMYVYCDRRGLKLDAFAFI 61
Query: 376 FDGRPLRAEQTPDELEMEDGDEIDAMLHQTGG 281
F+G + +TPDEL+MEDGD IDA +GG
Sbjct: 62 FNGARIGGLETPDELDMEDGDVIDACRAMSGG 93
>TAIR9_protein||AT5G55856.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: protein modification process; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin
(InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: SUMO1
(SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag
(TAIR:AT4G26840.1); Has 781 Blast hits to 780 proteins in 173 species:
Archae - 0; Bacteria - 0; Metazoa - 477; Fungi - 93; Plants - 124;
Viruses - 1; Other Eukaryotes - 86 (source: NCBI BLink). |
chr5:22607927-22608640 FORWARD
Length = 98
Score = 90 bits (222), Expect = 9e-019
Identities = 43/86 (50%), Positives = 60/86 (69%)
Frame = -1
Query: 538 DKKPNHQGAHINLKVKGQEGNQVFFRIKRSTQLKKLMNAYCDPQSVELNSIAFLFDGRPL 359
DKKP +HI +KVK Q+ V+FRIKR +L+K+M+AY D VE++++ FLFDG +
Sbjct: 5 DKKPLIPSSHITVKVKNQDDICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRI 64
Query: 358 RAEQTPDELEMEDGDEIDAMLHQTGG 281
+ QTP+EL +ED DEI+A Q GG
Sbjct: 65 KLNQTPNELGLEDEDEIEAFGEQLGG 90
>TAIR9_protein||AT5G48710.1 | Symbols: | ubiquitin-related |
chr5:19755065-19755572 REVERSE
Length = 115
Score = 75 bits (184), Expect = 2e-014
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = -1
Query: 511 HINLKVKGQEGNQV-FFRIKRSTQLKKLMNAYCDPQSVELNSIAFLFDGRPLRAEQTPDE 335
H+ LKVKGQ+ F ++R+ +L K+M Y + +E N+ FLFDG +R TPDE
Sbjct: 27 HVTLKVKGQDEEDFRVFWVRRNAKLLKMMELYTKMRGIEWNTFRFLFDGSRIREYHTPDE 86
Query: 334 LEMEDGDEIDAMLHQTGG 281
LE +DGDEIDAML Q G
Sbjct: 87 LERKDGDEIDAMLCQQSG 104
>TAIR9_protein||AT2G32765.1 | Symbols: SUM5, SUMO5, ATSUMO5 | SUMO5 (SMALL
UBIQUITINRELATED MODIFIER 5); protein tag | chr2:13894968-13895399
FORWARD
Length = 109
Score = 70 bits (171), Expect = 7e-013
Identities = 31/76 (40%), Positives = 52/76 (68%)
Frame = -1
Query: 508 INLKVKGQEGNQVFFRIKRSTQLKKLMNAYCDPQSVELNSIAFLFDGRPLRAEQTPDELE 329
+ LKVK Q+G + ++I LKKLM+AYC ++++ +S+ F+++GR ++A QTP +L
Sbjct: 28 VTLKVKNQQGAEDLYKIGTHAHLKKLMSAYCTKRNLDYSSVRFVYNGREIKARQTPAQLH 87
Query: 328 MEDGDEIDAMLHQTGG 281
ME+ DEI ++ GG
Sbjct: 88 MEEEDEICMVMELGGG 103
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,116,082,589
Number of Sequences: 33410
Number of Extensions: 4116082589
Number of Successful Extensions: 224650338
Number of sequences better than 0.0: 0
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