BLASTX 7.6.2
Query= RU24024 /QuerySize=1124
(1123 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G50430.1 | Symbols: UBC33 | UBC33 (ubiquitin-c... 370 1e-102
TAIR9_protein||AT5G50430.2 | Symbols: UBC33 | UBC33 (ubiquitin-c... 370 1e-102
TAIR9_protein||AT1G17280.1 | Symbols: UBC34 | UBC34 (ubiquitin-c... 367 7e-102
TAIR9_protein||AT1G17280.2 | Symbols: UBC34 | UBC34 (ubiquitin-c... 367 7e-102
TAIR9_protein||AT5G50430.3 | Symbols: UBC33 | UBC33 (ubiquitin-c... 265 4e-071
TAIR9_protein||AT3G17000.1 | Symbols: UBC32 | UBC32 (ubiquitin-c... 117 1e-026
TAIR9_protein||AT5G56150.1 | Symbols: UBC30 | UBC30 (ubiquitin-c... 79 5e-015
TAIR9_protein||AT5G56150.2 | Symbols: UBC30 | UBC30 (ubiquitin-c... 79 5e-015
TAIR9_protein||AT1G36340.1 | Symbols: UBC31 | UBC31 (ubiquitin-c... 70 2e-012
>TAIR9_protein||AT5G50430.1 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating
enzyme 33); ubiquitin-protein ligase | chr5:20534366-20536307 REVERSE
Length = 244
Score = 370 bits (949), Expect = 1e-102
Identities = 183/245 (74%), Positives = 204/245 (83%), Gaps = 5/245 (2%)
Frame = +3
Query: 132 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKF 311
MAEK+CIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGG+YYGKIKF
Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKF 60
Query: 312 PPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 491
PPEYPYKPPGI+MTTPNGRF+TQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP
Sbjct: 61 PPEYPYKPPGITMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
Query: 492 TTGSVNTTVAEKQRLAKTSLAFNAKNVTFRKMFPEYVEKYXXXXXXXXXXXXXXXVASES 671
TTGSVNT+VAEKQRLAK+SLAFN K+VTFRK+FPEYVEKY SE+
Sbjct: 121 TTGSVNTSVAEKQRLAKSSLAFNCKSVTFRKLFPEYVEKYSQQQVAEEEAATQQTTTSEN 180
Query: 672 ----SQENSKPLLEKVDDSTAGGMKTVGALKDMRKNKKQSFPTWMMLLLISIFGVVMALP 839
++N+K EK ++ VG LK+ R+NKK++ P W++LLL+SI GVVMALP
Sbjct: 181 QDFPQKDNAKVESEKSVGLKKESIQEVG-LKERRRNKKEALPGWIVLLLVSIVGVVMALP 239
Query: 840 LLQL* 854
LLQL*
Sbjct: 240 LLQL* 244
>TAIR9_protein||AT5G50430.2 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating
enzyme 33); ubiquitin-protein ligase | chr5:20534366-20536307 REVERSE
Length = 244
Score = 370 bits (949), Expect = 1e-102
Identities = 183/245 (74%), Positives = 204/245 (83%), Gaps = 5/245 (2%)
Frame = +3
Query: 132 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKF 311
MAEK+CIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGG+YYGKIKF
Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKF 60
Query: 312 PPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 491
PPEYPYKPPGI+MTTPNGRF+TQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP
Sbjct: 61 PPEYPYKPPGITMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
Query: 492 TTGSVNTTVAEKQRLAKTSLAFNAKNVTFRKMFPEYVEKYXXXXXXXXXXXXXXXVASES 671
TTGSVNT+VAEKQRLAK+SLAFN K+VTFRK+FPEYVEKY SE+
Sbjct: 121 TTGSVNTSVAEKQRLAKSSLAFNCKSVTFRKLFPEYVEKYSQQQVAEEEAATQQTTTSEN 180
Query: 672 ----SQENSKPLLEKVDDSTAGGMKTVGALKDMRKNKKQSFPTWMMLLLISIFGVVMALP 839
++N+K EK ++ VG LK+ R+NKK++ P W++LLL+SI GVVMALP
Sbjct: 181 QDFPQKDNAKVESEKSVGLKKESIQEVG-LKERRRNKKEALPGWIVLLLVSIVGVVMALP 239
Query: 840 LLQL* 854
LLQL*
Sbjct: 240 LLQL* 244
>TAIR9_protein||AT1G17280.1 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating
enzyme 34); ubiquitin-protein ligase | chr1:5917146-5919162 REVERSE
Length = 238
Score = 367 bits (942), Expect = 7e-102
Identities = 181/241 (75%), Positives = 196/241 (81%), Gaps = 3/241 (1%)
Frame = +3
Query: 132 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKF 311
MAEK+CIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGG+YYGKIKF
Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKF 60
Query: 312 PPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 491
PPEYPYKPPGI+MTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMD SP
Sbjct: 61 PPEYPYKPPGITMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
Query: 492 TTGSVNTTVAEKQRLAKTSLAFNAKNVTFRKMFPEYVEKYXXXXXXXXXXXXXXXVASES 671
TTGSVNTTV EKQRLAK+SLAFN K FRK+FPEYVEKY S
Sbjct: 121 TTGSVNTTVIEKQRLAKSSLAFNCKTPAFRKLFPEYVEKYNQQQLAEQATTQLTTPES-P 179
Query: 672 SQENSKPLLEKVDDSTAGGMKTVGALKDMRKNKKQSFPTWMMLLLISIFGVVMALPLLQL 851
+ ++K EK D T G + G LK+ +KN KQ P W++LLL+S+FGVVMALPLLQL
Sbjct: 180 QKSDTKVESEKTIDPTKGDSE--GGLKERKKNNKQGLPAWIILLLVSVFGVVMALPLLQL 237
Query: 852 * 854
*
Sbjct: 238 * 238
>TAIR9_protein||AT1G17280.2 | Symbols: UBC34 | UBC34 (ubiquitin-conjugating
enzyme 34); ubiquitin-protein ligase | chr1:5917146-5919162 REVERSE
Length = 238
Score = 367 bits (942), Expect = 7e-102
Identities = 181/241 (75%), Positives = 196/241 (81%), Gaps = 3/241 (1%)
Frame = +3
Query: 132 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKF 311
MAEK+CIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGG+YYGKIKF
Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKF 60
Query: 312 PPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 491
PPEYPYKPPGI+MTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMD SP
Sbjct: 61 PPEYPYKPPGITMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
Query: 492 TTGSVNTTVAEKQRLAKTSLAFNAKNVTFRKMFPEYVEKYXXXXXXXXXXXXXXXVASES 671
TTGSVNTTV EKQRLAK+SLAFN K FRK+FPEYVEKY S
Sbjct: 121 TTGSVNTTVIEKQRLAKSSLAFNCKTPAFRKLFPEYVEKYNQQQLAEQATTQLTTPES-P 179
Query: 672 SQENSKPLLEKVDDSTAGGMKTVGALKDMRKNKKQSFPTWMMLLLISIFGVVMALPLLQL 851
+ ++K EK D T G + G LK+ +KN KQ P W++LLL+S+FGVVMALPLLQL
Sbjct: 180 QKSDTKVESEKTIDPTKGDSE--GGLKERKKNNKQGLPAWIILLLVSVFGVVMALPLLQL 237
Query: 852 * 854
*
Sbjct: 238 * 238
>TAIR9_protein||AT5G50430.3 | Symbols: UBC33 | UBC33 (ubiquitin-conjugating
enzyme 33); ubiquitin-protein ligase | chr5:20534366-20536307 REVERSE
Length = 231
Score = 265 bits (677), Expect = 4e-071
Identities = 133/194 (68%), Positives = 153/194 (78%), Gaps = 5/194 (2%)
Frame = +3
Query: 285 GYYYGKIKFPPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGL 464
G+YYGKIKFPPEYPYKPPGI+MTTPNGRF+TQKKICLSMSDFHPESWNPMWSVSSILTGL
Sbjct: 39 GFYYGKIKFPPEYPYKPPGITMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGL 98
Query: 465 LSFMMDNSPTTGSVNTTVAEKQRLAKTSLAFNAKNVTFRKMFPEYVEKYXXXXXXXXXXX 644
LSFMMDNSPTTGSVNT+VAEKQRLAK+SLAFN K+VTFRK+FPEYVEKY
Sbjct: 99 LSFMMDNSPTTGSVNTSVAEKQRLAKSSLAFNCKSVTFRKLFPEYVEKYSQQQVAEEEAA 158
Query: 645 XXXXVASES----SQENSKPLLEKVDDSTAGGMKTVGALKDMRKNKKQSFPTWMMLLLIS 812
SE+ ++N+K EK ++ VG LK+ R+NKK++ P W++LLL+S
Sbjct: 159 TQQTTTSENQDFPQKDNAKVESEKSVGLKKESIQEVG-LKERRRNKKEALPGWIVLLLVS 217
Query: 813 IFGVVMALPLLQL* 854
I GVVMALPLLQL*
Sbjct: 218 IVGVVMALPLLQL* 231
Score = 80 bits (195), Expect = 3e-015
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 132 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEW 242
MAEK+CIKRLQKEYRALCKEPVSHVVARPSPNDILEW
Sbjct: 1 MAEKACIKRLQKEYRALCKEPVSHVVARPSPNDILEW 37
>TAIR9_protein||AT3G17000.1 | Symbols: UBC32 | UBC32 (ubiquitin-conjugating
enzyme 32); ubiquitin-protein ligase | chr3:5797296-5799467 FORWARD
Length = 310
Score = 117 bits (293), Expect = 1e-026
Identities = 53/131 (40%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
Frame = +3
Query: 150 IKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPY 329
+KR+ +E + + P ++ P +I EW + + G T F GG Y+G+I+ P +YP+
Sbjct: 13 VKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPF 72
Query: 330 KPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDN-SPTTGSV 506
KPP + TPNGRF T KICLS+S++HPE W P WSV + L L++FM + + GSV
Sbjct: 73 KPPSFMLLTPNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPNGALGSV 132
Query: 507 NTTVAEKQRLA 539
+ E++ LA
Sbjct: 133 DYPKDERRTLA 143
>TAIR9_protein||AT5G56150.1 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating
enzyme 30); ubiquitin-protein ligase | chr5:22729756-22730964 FORWARD
Length = 149
Score = 79 bits (193), Expect = 5e-015
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Frame = +3
Query: 153 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYK 332
KR+ KE R L ++P A P+ +D+ +W + G +PFAGG + I FPP+YP+K
Sbjct: 4 KRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFK 63
Query: 333 PPGISMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 491
PP ++ T + + ICL D E W+P +VS +L + S + D +P
Sbjct: 64 PPKVAFRTKVYHPNINSNGSICL---DILKEQWSPALTVSKVLLSICSLLTDPNP 115
>TAIR9_protein||AT5G56150.2 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating
enzyme 30); ubiquitin-protein ligase | chr5:22729756-22730964 FORWARD
Length = 149
Score = 79 bits (193), Expect = 5e-015
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Frame = +3
Query: 153 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYK 332
KR+ KE R L ++P A P+ +D+ +W + G +PFAGG + I FPP+YP+K
Sbjct: 4 KRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFK 63
Query: 333 PPGISMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 491
PP ++ T + + ICL D E W+P +VS +L + S + D +P
Sbjct: 64 PPKVAFRTKVYHPNINSNGSICL---DILKEQWSPALTVSKVLLSICSLLTDPNP 115
>TAIR9_protein||AT1G36340.1 | Symbols: UBC31 | UBC31 (ubiquitin-conjugating
enzyme 31); small conjugating protein ligase/ ubiquitin-protein ligase
| chr1:13683791-13684924 REVERSE
Length = 155
Score = 70 bits (171), Expect = 2e-012
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Frame = +3
Query: 138 EKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKFPP 317
+K +R+ EYRA+ + + + S N+I EW V+ G +GTP+ GG + IKFP
Sbjct: 6 DKKAAQRIAMEYRAMISKESLFSIGQNS-NNIYEWTAVIRGPDGTPYEGGMFNLSIKFPT 64
Query: 318 EYPYKPPGISMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 491
+YP+KPP + TP + + IC+++ + W P V +L +L + +P
Sbjct: 65 DYPFKPPKFTFKTPIYHPNINDEGSICMNIL---KDKWTPALMVEKVLLSILLLLEKPNP 121
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,143,980,089
Number of Sequences: 33410
Number of Extensions: 4143980089
Number of Successful Extensions: 224723188
Number of sequences better than 0.0: 0
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