BLASTX 7.6.2
Query= RU24178 /QuerySize=827
(826 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A);... 151 8e-037
TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTA... 151 8e-037
TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding... 149 3e-036
TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding... 144 8e-035
TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA... 143 2e-034
TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA... 142 4e-034
TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |... 121 7e-028
TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding... 116 2e-026
TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7... 113 2e-025
TAIR9_protein||AT1G52740.1 | Symbols: HTA9 | HTA9 (HISTONE H2A P... 76 2e-014
TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding... 75 6e-014
TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 74 1e-013
TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 74 1e-013
TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 74 1e-013
TAIR9_protein||AT4G13570.1 | Symbols: HTA4 | HTA4; DNA binding |... 49 3e-006
>TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A); DNA binding |
chr4:13637515-13638325 REVERSE
Length = 132
Score = 151 bits (379), Expect = 8e-037
Identities = 77/95 (81%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRH 501
LQFPVGRIARFLKAGKYAERVGAGAP GNAARDNKKTRIVPRH
Sbjct: 25 LQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRH 84
Query: 500 IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 396
IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP
Sbjct: 85 IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 119
>TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTANT TO
AGROBACTERIUM TRANSFORMATION 5); DNA binding | chr5:22196540-22197279
FORWARD
Length = 131
Score = 151 bits (379), Expect = 8e-037
Identities = 77/95 (81%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRH 501
LQFPVGRIARFLKAGKYAERVGAGAP GNAARDNKKTRIVPRH
Sbjct: 25 LQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRH 84
Query: 500 IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 396
IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP
Sbjct: 85 IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 119
>TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding |
chr1:18926948-18927443 FORWARD
Length = 133
Score = 149 bits (374), Expect = 3e-036
Identities = 76/95 (80%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRH 501
LQFPVGRIARFLK GKYAERVGAGAP GNAARDNKKTRIVPRH
Sbjct: 25 LQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRH 84
Query: 500 IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 396
IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP
Sbjct: 85 IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 119
>TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding |
chr3:7229472-7229963 FORWARD
Length = 133
Score = 144 bits (362), Expect = 8e-035
Identities = 74/95 (77%), Positives = 75/95 (78%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRH 501
LQFPVGRIARFLK GKYA RVGAGAP GNAARDNKKTRIVPRH
Sbjct: 25 LQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRH 84
Query: 500 IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 396
IQLAVRNDEELSKLLGDVTIANGGVMPNIH+LLLP
Sbjct: 85 IQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLP 119
>TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX |
GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX); DNA binding |
chr1:20414607-20415206 REVERSE
Length = 143
Score = 143 bits (359), Expect = 2e-034
Identities = 73/95 (76%), Positives = 74/95 (77%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRH 501
LQFPVGRIARFLKAGKYAERVGAGAP GNAARDNKKTRIVPRH
Sbjct: 31 LQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRH 90
Query: 500 IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 396
IQLAVRNDEELSKLLG VTIANGGV+PNIH LLP
Sbjct: 91 IQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 125
>TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA-H2AX | H2AXA;
DNA binding | chr1:2847144-2847676 REVERSE
Length = 143
Score = 142 bits (356), Expect = 4e-034
Identities = 72/95 (75%), Positives = 74/95 (77%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRH 501
LQFPVGRIARFLK+GKYAERVGAGAP GNAARDNKKTRIVPRH
Sbjct: 31 LQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRIVPRH 90
Query: 500 IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 396
IQLAVRNDEELSKLLG VTIANGGV+PNIH LLP
Sbjct: 91 IQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLP 125
>TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |
chr5:24115605-24116144 REVERSE
Length = 151
Score = 121 bits (302), Expect = 7e-028
Identities = 58/95 (61%), Positives = 70/95 (73%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRH 501
LQFPVGRI RFLK G+YA+R+G GAP GNAARDNKK+RI+PRH
Sbjct: 33 LQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRIIPRH 92
Query: 500 IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 396
+ LA+RNDEEL KLL VTIA+GGV+PNI+++LLP
Sbjct: 93 LLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLP 127
>TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding |
chr5:575437-576456 FORWARD
Length = 154
Score = 116 bits (289), Expect = 2e-026
Identities = 57/95 (60%), Positives = 67/95 (70%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRH 501
LQFPVGRI R+LK G+Y++RVG GAP GNAARDNKK RI+PRH
Sbjct: 33 LQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRH 92
Query: 500 IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 396
+ LAVRNDEEL LL VTIA+GGV+PNI+ +LLP
Sbjct: 93 VLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLP 127
>TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7); DNA binding
| chr5:9792807-9793365 REVERSE
Length = 151
Score = 113 bits (281), Expect = 2e-025
Identities = 57/95 (60%), Positives = 67/95 (70%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPRH 501
LQFPVGRIAR+LK G+YA R G+GAP GNAARDNKK RI PRH
Sbjct: 34 LQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRINPRH 93
Query: 500 IQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLP 396
+ LA+RNDEEL +LL VTIA+GGV+PNI+ +LLP
Sbjct: 94 LCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLP 128
>TAIR9_protein||AT1G52740.1 | Symbols: HTA9 | HTA9 (HISTONE H2A PROTEIN 9); DNA
binding | chr1:19645409-19646221 FORWARD
Length = 135
Score = 76 bits (186), Expect = 2e-014
Identities = 45/95 (47%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPR 504
LQFPVGR+ R LK A RVGA A GNA++D K RI PR
Sbjct: 35 LQFPVGRVHRLLKTRSTAHGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRISPR 94
Query: 503 HIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLL 399
H+QLA+R DEEL L+ TIA GGV+P+IH L+
Sbjct: 95 HLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLI 128
>TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding |
chr3:20196532-20197466 FORWARD
Length = 137
Score = 75 bits (182), Expect = 6e-014
Identities = 45/95 (47%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPR 504
+QFPVGRI R LK A RVGA A GNA++D K RI PR
Sbjct: 37 IQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPR 96
Query: 503 HIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLL 399
H+QLA+R DEEL L+ TIA GGV+P+IH L+
Sbjct: 97 HLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLI 130
>TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 74 bits (180), Expect = 1e-013
Identities = 45/95 (47%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPR 504
+QFPVGRI R LK A RVGA A GNA++D K RI PR
Sbjct: 37 IQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPR 96
Query: 503 HIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLL 399
H+QLA+R DEEL L+ TIA GGV+P+IH L+
Sbjct: 97 HLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLV 130
>TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 74 bits (180), Expect = 1e-013
Identities = 45/95 (47%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPR 504
+QFPVGRI R LK A RVGA A GNA++D K RI PR
Sbjct: 37 IQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPR 96
Query: 503 HIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLL 399
H+QLA+R DEEL L+ TIA GGV+P+IH L+
Sbjct: 97 HLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLV 130
>TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 74 bits (180), Expect = 1e-013
Identities = 45/95 (47%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = -3
Query: 680 LQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKTRIVPR 504
+QFPVGRI R LK A RVGA A GNA++D K RI PR
Sbjct: 37 IQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRITPR 96
Query: 503 HIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLL 399
H+QLA+R DEEL L+ TIA GGV+P+IH L+
Sbjct: 97 HLQLAIRGDEELDTLIKG-TIAGGGVIPHIHKSLV 130
>TAIR9_protein||AT4G13570.1 | Symbols: HTA4 | HTA4; DNA binding |
chr4:7884516-7885664 FORWARD
Length = 119
Score = 49 bits (115), Expect = 3e-006
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = -3
Query: 545 NAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIH 411
N ++D K RI PRH+QLA+R DEEL L+ TI G V+P+IH
Sbjct: 75 NTSKDLKVKRITPRHLQLAIRGDEELDTLIKG-TIIGGSVIPHIH 118
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,172,003,312
Number of Sequences: 33410
Number of Extensions: 4172003312
Number of Successful Extensions: 224782364
Number of sequences better than 0.0: 0
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