BLASTX 7.6.2
Query= RU24258 /QuerySize=561
(560 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G27350.1 | Symbols: | FUNCTIONS IN: molecular... 114 6e-026
TAIR9_protein||AT1G27330.1 | Symbols: | FUNCTIONS IN: molecular... 114 6e-026
>TAIR9_protein||AT1G27350.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ribosome
associated membrane RAMP4 (InterPro:IPR010580); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT1G27330.1); Has 267
Blast hits to 267 proteins in 83 species: Archae - 0; Bacteria - 0;
Metazoa - 183; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes -
29 (source: NCBI BLink). | chr1:9498319-9499303 REVERSE
Length = 69
Score = 114 bits (283), Expect = 6e-026
Identities = 53/63 (84%), Positives = 59/63 (93%)
Frame = +3
Query: 129 LADRKVERFEKNITKRGAVPETTAKKGKDYPVGPILLGFFIFVVVGSSLFQIIRTATTGG 308
LADRK+E+F+KNI KRG VPETT KKGKDYPVGPILLGFF+FVV+GSSLFQIIRTAT+GG
Sbjct: 7 LADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIRTATSGG 66
Query: 309 MA* 317
MA*
Sbjct: 67 MA* 69
>TAIR9_protein||AT1G27330.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: response to oxidative stress; LOCATED IN:
cellular_component unknown; EXPRESSED IN: male gametophyte, pollen
tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen
stage; CONTAINS InterPro DOMAIN/s: Ribosome associated membrane RAMP4
(InterPro:IPR010580); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G27350.1); Has 267 Blast hits to 267 proteins
in 83 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). |
chr1:9493064-9493898 FORWARD
Length = 69
Score = 114 bits (283), Expect = 6e-026
Identities = 53/63 (84%), Positives = 59/63 (93%)
Frame = +3
Query: 129 LADRKVERFEKNITKRGAVPETTAKKGKDYPVGPILLGFFIFVVVGSSLFQIIRTATTGG 308
LADRK+E+F+KNI KRG VPETT KKGKDYPVGPILLGFF+FVV+GSSLFQIIRTAT+GG
Sbjct: 7 LADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIRTATSGG 66
Query: 309 MA* 317
MA*
Sbjct: 67 MA* 69
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,172,003,312
Number of Sequences: 33410
Number of Extensions: 4172003312
Number of Successful Extensions: 224782364
Number of sequences better than 0.0: 0
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