BLASTX 7.6.2
Query= RU24267 /QuerySize=547
(546 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA... 213 5e-056
TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA... 213 7e-056
TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A);... 166 1e-041
TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding... 165 2e-041
TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTA... 164 5e-041
TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding... 163 1e-040
TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |... 144 4e-035
TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding... 137 5e-033
TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7... 137 6e-033
TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 94 4e-020
TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 94 4e-020
TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 94 4e-020
TAIR9_protein||AT1G52740.1 | Symbols: HTA9 | HTA9 (HISTONE H2A P... 93 8e-020
TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding... 93 1e-019
TAIR9_protein||AT4G13570.1 | Symbols: HTA4 | HTA4; DNA binding |... 52 2e-007
>TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA-H2AX | H2AXA;
DNA binding | chr1:2847144-2847676 REVERSE
Length = 143
Score = 213 bits (542), Expect = 5e-056
Identities = 110/137 (80%), Positives = 112/137 (81%)
Frame = +1
Query: 49 SPTSKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXX 228
S T+KGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAP
Sbjct: 7 SGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYL 66
Query: 229 XXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPK 408
GNAARDNKK RIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ LLP
Sbjct: 67 AAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPS 126
Query: 409 KTGKGKGDIGSASQEF* 459
K GK KGDIGSASQEF*
Sbjct: 127 KVGKNKGDIGSASQEF* 143
>TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX |
GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX); DNA binding |
chr1:20414607-20415206 REVERSE
Length = 143
Score = 213 bits (541), Expect = 7e-056
Identities = 110/141 (78%), Positives = 113/141 (80%)
Frame = +1
Query: 37 SDMSSPTSKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXX 216
S S T+KGGRGKPKATKSVSRSSKAGLQFPVGRIARFLK+GKYAERVGAGAP
Sbjct: 3 SGAGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 62
Query: 217 XXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQN 396
GNAARDNKK RIVPRHIQLAVRNDEELSKLLG+VTIANGGVLPNIHQ
Sbjct: 63 LEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 122
Query: 397 LLPKKTGKGKGDIGSASQEF* 459
LLP K GK KGDIGSASQEF*
Sbjct: 123 LLPSKVGKNKGDIGSASQEF* 143
>TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A); DNA binding |
chr4:13637515-13638325 REVERSE
Length = 132
Score = 166 bits (418), Expect = 1e-041
Identities = 89/124 (71%), Positives = 91/124 (73%), Gaps = 4/124 (3%)
Frame = +1
Query: 67 GRGKP----KATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXX 234
GRGK A KS SRSSKAGLQFPVGRIARFLK+GKYAERVGAGAP
Sbjct: 3 GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 235 XXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKT 414
GNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK
Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122
Query: 415 GKGK 426
G K
Sbjct: 123 GSSK 126
>TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding |
chr1:18926948-18927443 FORWARD
Length = 133
Score = 165 bits (416), Expect = 2e-041
Identities = 88/124 (70%), Positives = 91/124 (73%), Gaps = 4/124 (3%)
Frame = +1
Query: 67 GRGKP----KATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXX 234
GRGK A K+ +RSSKAGLQFPVGRIARFLK GKYAERVGAGAP
Sbjct: 3 GRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 235 XXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKT 414
GNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKKT
Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 122
Query: 415 GKGK 426
G K
Sbjct: 123 GASK 126
>TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTANT TO
AGROBACTERIUM TRANSFORMATION 5); DNA binding | chr5:22196540-22197279
FORWARD
Length = 131
Score = 164 bits (413), Expect = 5e-041
Identities = 88/124 (70%), Positives = 91/124 (73%), Gaps = 4/124 (3%)
Frame = +1
Query: 67 GRGKP----KATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXX 234
GRGK A K+ SRSSKAGLQFPVGRIARFLK+GKYAERVGAGAP
Sbjct: 3 GRGKTLGSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 235 XXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKT 414
GNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK
Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122
Query: 415 GKGK 426
G K
Sbjct: 123 GASK 126
>TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding |
chr3:7229472-7229963 FORWARD
Length = 133
Score = 163 bits (410), Expect = 1e-040
Identities = 88/124 (70%), Positives = 90/124 (72%), Gaps = 4/124 (3%)
Frame = +1
Query: 67 GRGKP----KATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXX 234
GRGK A KS SRSSKAGLQFPVGRIARFLK+GKYA RVGAGAP
Sbjct: 3 GRGKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAA 62
Query: 235 XXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKT 414
GNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH LLPKK
Sbjct: 63 EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKA 122
Query: 415 GKGK 426
G K
Sbjct: 123 GASK 126
>TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |
chr5:24115605-24116144 REVERSE
Length = 151
Score = 144 bits (362), Expect = 4e-035
Identities = 75/119 (63%), Positives = 86/119 (72%), Gaps = 2/119 (1%)
Frame = +1
Query: 64 GGRGKPKA--TKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXXX 237
GGR P A TKSVS+S KAGLQFPVGRI RFLK G+YA+R+G GAP
Sbjct: 12 GGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAE 71
Query: 238 XXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKT 414
GNAARDNKK+RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLPKK+
Sbjct: 72 VLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKKS 130
>TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding |
chr5:575437-576456 FORWARD
Length = 154
Score = 137 bits (344), Expect = 5e-033
Identities = 75/132 (56%), Positives = 87/132 (65%), Gaps = 6/132 (4%)
Frame = +1
Query: 40 DMSSPTSKGGRGK-----PKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXX 204
D + KG G+ PK K VSRS K+GLQFPVGRI R+LK G+Y++RVG GAP
Sbjct: 2 DSGTKVKKGAAGRRSGGGPK-KKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60
Query: 205 XXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPN 384
GNAARDNKKNRI+PRH+ LAVRNDEEL LL VTIA+GGVLPN
Sbjct: 61 LAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPN 120
Query: 385 IHQNLLPKKTGK 420
I+ LLPKK+ K
Sbjct: 121 INPILLPKKSEK 132
>TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7); DNA binding
| chr5:9792807-9793365 REVERSE
Length = 151
Score = 137 bits (343), Expect = 6e-033
Identities = 74/128 (57%), Positives = 84/128 (65%)
Frame = +1
Query: 64 GGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPXXXXXXXXXXXXXXX 243
GGR KSVS+S KAGLQFPVGRIAR+LK G+YA R G+GAP
Sbjct: 15 GGRKGGDRKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVL 74
Query: 244 XXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKTGKG 423
GNAARDNKKNRI PRH+ LA+RNDEEL +LL VTIA+GGVLPNI+ LLPKK+
Sbjct: 75 ELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLPNINPVLLPKKSTAS 134
Query: 424 KGDIGSAS 447
AS
Sbjct: 135 SSQAEKAS 142
>TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 94 bits (233), Expect = 4e-020
Identities = 55/109 (50%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Frame = +1
Query: 91 KSVSRSSKAGLQFPVGRIARFLKSGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAAR 267
KS+SRSS+AG+QFPVGRI R LK A RVGA A GNA++
Sbjct: 27 KSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
Query: 268 DNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKT 414
D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K T
Sbjct: 87 DLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLVNKVT 134
>TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 94 bits (233), Expect = 4e-020
Identities = 55/109 (50%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Frame = +1
Query: 91 KSVSRSSKAGLQFPVGRIARFLKSGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAAR 267
KS+SRSS+AG+QFPVGRI R LK A RVGA A GNA++
Sbjct: 27 KSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
Query: 268 DNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKT 414
D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K T
Sbjct: 87 DLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLVNKVT 134
>TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 94 bits (233), Expect = 4e-020
Identities = 55/109 (50%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Frame = +1
Query: 91 KSVSRSSKAGLQFPVGRIARFLKSGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAAR 267
KS+SRSS+AG+QFPVGRI R LK A RVGA A GNA++
Sbjct: 27 KSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
Query: 268 DNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKT 414
D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++L+ K T
Sbjct: 87 DLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKSLVNKVT 134
>TAIR9_protein||AT1G52740.1 | Symbols: HTA9 | HTA9 (HISTONE H2A PROTEIN 9); DNA
binding | chr1:19645409-19646221 FORWARD
Length = 135
Score = 93 bits (230), Expect = 8e-020
Identities = 59/131 (45%), Positives = 76/131 (58%), Gaps = 10/131 (7%)
Frame = +1
Query: 43 MSSPTSKG-GRGKPKAT-------KSVSRSSKAGLQFPVGRIARFLKSGKYAE-RVGAGA 195
MS +KG GKP + K ++RSS+AGLQFPVGR+ R LK+ A RVGA A
Sbjct: 1 MSGKGAKGLIMGKPSGSDKDKDKKKPITRSSRAGLQFPVGRVHRLLKTRSTAHGRVGATA 60
Query: 196 PXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGV 375
GNA++D K RI PRH+QLA+R DEEL L+ TIA GGV
Sbjct: 61 AVYTAAILEYLTAEVLELAGNASKDLKVKRISPRHLQLAIRGDEELDTLI-KGTIAGGGV 119
Query: 376 LPNIHQNLLPK 408
+P+IH++L+ K
Sbjct: 120 IPHIHKSLINK 130
>TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding |
chr3:20196532-20197466 FORWARD
Length = 137
Score = 93 bits (229), Expect = 1e-019
Identities = 56/126 (44%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Frame = +1
Query: 43 MSSPTSKGGRGKPK-ATKSVSRSSKAGLQFPVGRIARFLKSGKYAE-RVGAGAPXXXXXX 216
+++ T + K K K +SRS++AG+QFPVGRI R LK+ A RVGA A
Sbjct: 10 VAAKTMAANKDKDKDKKKPISRSARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASI 69
Query: 217 XXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQN 396
GNA++D K RI PRH+QLA+R DEEL L+ TIA GGV+P+IH++
Sbjct: 70 LEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIAGGGVIPHIHKS 128
Query: 397 LLPKKT 414
L+ K T
Sbjct: 129 LINKTT 134
>TAIR9_protein||AT4G13570.1 | Symbols: HTA4 | HTA4; DNA binding |
chr4:7884516-7885664 FORWARD
Length = 119
Score = 52 bits (124), Expect = 2e-007
Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +1
Query: 76 KPKATKSVSRSSKAGLQFPVGRIARFLKSGKYA-ERVGAGAPXXXXXXXXXXXXXXXXXX 252
K A ++V G F V RI + LK+ A VGA
Sbjct: 14 KISAFENVRMIMVEGEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLA 73
Query: 253 GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIH 390
N ++D K RI PRH+QLA+R DEEL L+ TI G V+P+IH
Sbjct: 74 ENTSKDLKVKRITPRHLQLAIRGDEELDTLI-KGTIIGGSVIPHIH 118
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,172,003,312
Number of Sequences: 33410
Number of Extensions: 4172003312
Number of Successful Extensions: 224782364
Number of sequences better than 0.0: 0
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