BLASTX 7.6.2
Query= RU24309 /QuerySize=754
(753 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G07790.1 | Symbols: HTB1 | HTB1; DNA binding |... 177 9e-045
TAIR9_protein||AT5G59910.1 | Symbols: HTB4 | HTB4; DNA binding |... 177 9e-045
TAIR9_protein||AT3G46030.1 | Symbols: HTB11 | HTB11; DNA binding... 176 2e-044
TAIR9_protein||AT3G45980.1 | Symbols: H2B, HTB9 | HTB9; DNA bind... 176 2e-044
TAIR9_protein||AT5G02570.1 | Symbols: | histone H2B, putative |... 176 2e-044
TAIR9_protein||AT2G28720.1 | Symbols: | histone H2B, putative |... 175 3e-044
TAIR9_protein||AT3G53650.1 | Symbols: | histone H2B, putative |... 175 4e-044
TAIR9_protein||AT2G37470.1 | Symbols: | histone H2B, putative |... 174 6e-044
TAIR9_protein||AT5G22880.1 | Symbols: H2B, HTB2 | HTB2; DNA bind... 174 6e-044
TAIR9_protein||AT3G09480.1 | Symbols: | histone H2B, putative |... 170 1e-042
TAIR9_protein||AT1G08170.1 | Symbols: | histone H2B family prot... 119 3e-027
>TAIR9_protein||AT1G07790.1 | Symbols: HTB1 | HTB1; DNA binding |
chr1:2413049-2413495 FORWARD
Length = 149
Score = 177 bits (447), Expect = 9e-045
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = -3
Query: 523 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 344
+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSR
Sbjct: 57 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 116
Query: 343 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 245
EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 117 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 149
>TAIR9_protein||AT5G59910.1 | Symbols: HTB4 | HTB4; DNA binding |
chr5:24127206-24127658 FORWARD
Length = 151
Score = 177 bits (447), Expect = 9e-045
Identities = 90/93 (96%), Positives = 92/93 (98%)
Frame = -3
Query: 523 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 344
SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSR
Sbjct: 59 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 118
Query: 343 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 245
EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 119 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 151
>TAIR9_protein||AT3G46030.1 | Symbols: HTB11 | HTB11; DNA binding |
chr3:16913614-16914051 REVERSE
Length = 146
Score = 176 bits (445), Expect = 2e-044
Identities = 90/93 (96%), Positives = 91/93 (97%)
Frame = -3
Query: 523 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 344
SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSR
Sbjct: 54 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSR 113
Query: 343 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 245
EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 114 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 146
>TAIR9_protein||AT3G45980.1 | Symbols: H2B, HTB9 | HTB9; DNA binding |
chr3:16897492-16897944 REVERSE
Length = 151
Score = 176 bits (445), Expect = 2e-044
Identities = 90/93 (96%), Positives = 91/93 (97%)
Frame = -3
Query: 523 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 344
SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSR
Sbjct: 59 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSR 118
Query: 343 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 245
EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 119 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 151
>TAIR9_protein||AT5G02570.1 | Symbols: | histone H2B, putative |
chr5:576742-577140 REVERSE
Length = 133
Score = 176 bits (445), Expect = 2e-044
Identities = 90/93 (96%)
Frame = -3
Query: 523 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 344
S ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR
Sbjct: 41 STETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 100
Query: 343 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 245
EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 101 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 133
>TAIR9_protein||AT2G28720.1 | Symbols: | histone H2B, putative |
chr2:12327043-12327498 FORWARD
Length = 152
Score = 175 bits (443), Expect = 3e-044
Identities = 89/93 (95%), Positives = 91/93 (97%)
Frame = -3
Query: 523 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 344
S ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSR
Sbjct: 60 STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSR 119
Query: 343 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 245
EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 120 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 152
>TAIR9_protein||AT3G53650.1 | Symbols: | histone H2B, putative |
chr3:19889358-19889774 FORWARD
Length = 139
Score = 175 bits (442), Expect = 4e-044
Identities = 88/93 (94%), Positives = 91/93 (97%)
Frame = -3
Query: 523 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 344
++ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR
Sbjct: 47 NIETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 106
Query: 343 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 245
EIQTAVRLVLPGEL+KHAVSEGTKAVTKFTSS*
Sbjct: 107 EIQTAVRLVLPGELSKHAVSEGTKAVTKFTSS* 139
>TAIR9_protein||AT2G37470.1 | Symbols: | histone H2B, putative |
chr2:15736832-15737248 FORWARD
Length = 139
Score = 174 bits (440), Expect = 6e-044
Identities = 88/91 (96%), Positives = 90/91 (98%)
Frame = -3
Query: 523 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 344
SVETYKIYIFKVLKQVHPD+GIS KAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSR
Sbjct: 48 SVETYKIYIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSR 107
Query: 343 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 251
EIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct: 108 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 138
>TAIR9_protein||AT5G22880.1 | Symbols: H2B, HTB2 | HTB2; DNA binding |
chr5:7652130-7652567 REVERSE
Length = 146
Score = 174 bits (440), Expect = 6e-044
Identities = 89/93 (95%), Positives = 91/93 (97%)
Frame = -3
Query: 523 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 344
+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSR
Sbjct: 54 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSR 113
Query: 343 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 245
EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 114 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 146
>TAIR9_protein||AT3G09480.1 | Symbols: | histone H2B, putative |
chr3:2914890-2915270 REVERSE
Length = 127
Score = 170 bits (429), Expect = 1e-042
Identities = 86/93 (92%), Positives = 88/93 (94%)
Frame = -3
Query: 523 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 344
S ETYKIY+FKVLKQVHPDIGIS KAMGIMNSFIND FEK+A ESSRLARYNKKPTITSR
Sbjct: 35 STETYKIYLFKVLKQVHPDIGISGKAMGIMNSFINDTFEKIALESSRLARYNKKPTITSR 94
Query: 343 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 245
EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS*
Sbjct: 95 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 127
>TAIR9_protein||AT1G08170.1 | Symbols: | histone H2B family protein |
chr1:2562941-2563672 REVERSE
Length = 244
Score = 119 bits (296), Expect = 3e-027
Identities = 52/87 (59%), Positives = 77/87 (88%)
Frame = -3
Query: 517 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 338
+ Y+ Y++KV+KQVHPD+GI+SKAM ++N F+ D+FE++AQE++RL+ Y K+ T++SREI
Sbjct: 149 DEYRRYVYKVMKQVHPDLGITSKAMTVVNMFMGDMFERIAQEAARLSDYTKRRTLSSREI 208
Query: 337 QTAVRLVLPGELAKHAVSEGTKAVTKF 257
+ AVRLVLPGEL++HAV+EG+KAV+ F
Sbjct: 209 EAAVRLVLPGELSRHAVAEGSKAVSNF 235
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,172,003,312
Number of Sequences: 33410
Number of Extensions: 4172003312
Number of Successful Extensions: 224782364
Number of sequences better than 0.0: 0
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