BLASTX 7.6.2
Query= RU24443 /QuerySize=598
(597 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G02540.1 | Symbols: RAD23-3 | RAD23-3 (PUTATIV... 127 4e-030
TAIR9_protein||AT3G02540.2 | Symbols: RAD23-3 | RAD23-3 (PUTATIV... 127 4e-030
TAIR9_protein||AT5G38470.1 | Symbols: | DNA repair protein RAD2... 121 5e-028
TAIR9_protein||AT5G38470.2 | Symbols: | DNA repair protein RAD2... 121 5e-028
TAIR9_protein||AT1G16190.1 | Symbols: | DNA repair protein RAD2... 95 3e-020
TAIR9_protein||AT1G79650.2 | Symbols: RAD23 | RAD23; damaged DNA... 94 7e-020
TAIR9_protein||AT1G79650.3 | Symbols: RAD23 | RAD23; damaged DNA... 94 7e-020
TAIR9_protein||AT1G79650.1 | Symbols: RAD23 | RAD23; damaged DNA... 94 7e-020
TAIR9_protein||AT5G16090.1 | Symbols: | INVOLVED IN: protein mo... 85 3e-017
TAIR9_protein||AT1G23410.1 | Symbols: | ubiquitin extension pro... 47 8e-006
TAIR9_protein||AT1G65350.1 | Symbols: UBQ13 | UBQ13; protein bin... 47 8e-006
TAIR9_protein||AT2G47110.1 | Symbols: UBQ6 | UBQ6; protein bindi... 47 8e-006
TAIR9_protein||AT3G62250.1 | Symbols: UBQ5 | UBQ5 (ubiquitin 5);... 47 8e-006
TAIR9_protein||AT1G31340.1 | Symbols: RUB1, NEDD8, ATRUB1 | RUB1... 47 1e-005
TAIR9_protein||AT2G35635.1 | Symbols: UBQ7, RUB2 | UBQ7; protein... 47 1e-005
TAIR9_protein||AT2G36170.1 | Symbols: | ubiquitin extension pro... 47 1e-005
TAIR9_protein||AT3G52590.1 | Symbols: UBQ1, EMB2167, ERD16, HAP4... 47 1e-005
TAIR9_protein||AT4G05320.2 | Symbols: UBQ10 | UBQ10 (POLYUBIQUIT... 47 1e-005
TAIR9_protein||AT4G02890.1 | Symbols: UBQ14 | UBQ14; protein bin... 47 1e-005
TAIR9_protein||AT4G05050.1 | Symbols: UBQ11 | UBQ11 (UBIQUITIN 1... 47 1e-005
>TAIR9_protein||AT3G02540.1 | Symbols: RAD23-3 | RAD23-3 (PUTATIVE DNA REPAIR
PROTEIN RAD23-3); damaged DNA binding | chr3:533095-536151 REVERSE
Length = 420
Score = 127 bits (319), Expect = 4e-030
Identities = 60/88 (68%), Positives = 78/88 (88%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
MK+FVKTLKGT+FEIEV+P+ V DVK+ IE+ QGADVYPA+KQMLIHQGKVLKD TT+E
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 338 ENQVAENSFIVIMLSKASPSGSSSTQGA 421
EN+VAENSFIVIM++K+ P+ ++++ +
Sbjct: 61 ENKVAENSFIVIMMNKSKPASAAASSAS 88
>TAIR9_protein||AT3G02540.2 | Symbols: RAD23-3 | RAD23-3 (PUTATIVE DNA REPAIR
PROTEIN RAD23-3) | chr3:533906-536151 REVERSE
Length = 300
Score = 127 bits (319), Expect = 4e-030
Identities = 60/88 (68%), Positives = 78/88 (88%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
MK+FVKTLKGT+FEIEV+P+ V DVK+ IE+ QGADVYPA+KQMLIHQGKVLKD TT+E
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 338 ENQVAENSFIVIMLSKASPSGSSSTQGA 421
EN+VAENSFIVIM++K+ P+ ++++ +
Sbjct: 61 ENKVAENSFIVIMMNKSKPASAAASSAS 88
>TAIR9_protein||AT5G38470.1 | Symbols: | DNA repair protein RAD23, putative |
chr5:15404720-15407500 FORWARD
Length = 379
Score = 121 bits (301), Expect = 5e-028
Identities = 67/91 (73%), Positives = 75/91 (82%), Gaps = 4/91 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
MK+FVKTL G+NFEIEV+P V+DVK IET +GA+ YPA+KQMLIHQGKVLKD TTLE
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 59
Query: 338 ENQVAENSFIVIMLS--KASPSGSSSTQGAP 424
EN V ENSFIVIMLS KASPSG +ST AP
Sbjct: 60 ENNVVENSFIVIMLSKTKASPSG-ASTASAP 89
>TAIR9_protein||AT5G38470.2 | Symbols: | DNA repair protein RAD23, putative |
chr5:15404720-15407251 FORWARD
Length = 333
Score = 121 bits (301), Expect = 5e-028
Identities = 67/91 (73%), Positives = 75/91 (82%), Gaps = 4/91 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
MK+FVKTL G+NFEIEV+P V+DVK IET +GA+ YPA+KQMLIHQGKVLKD TTLE
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 59
Query: 338 ENQVAENSFIVIMLS--KASPSGSSSTQGAP 424
EN V ENSFIVIMLS KASPSG +ST AP
Sbjct: 60 ENNVVENSFIVIMLSKTKASPSG-ASTASAP 89
>TAIR9_protein||AT1G16190.1 | Symbols: | DNA repair protein RAD23, putative |
chr1:5543267-5545892 FORWARD
Length = 369
Score = 95 bits (234), Expect = 3e-020
Identities = 51/89 (57%), Positives = 63/89 (70%), Gaps = 3/89 (3%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
MK+ VKTLKG++FEI V P + VK+ IE +Q D YP +Q+LIH GKVLKD TTL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 338 ENQVAENSFIVIMLSK---ASPSGSSSTQ 415
EN+V E F+V+MLSK AS +G SSTQ
Sbjct: 61 ENKVTEEGFLVVMLSKSKTASSAGPSSTQ 89
>TAIR9_protein||AT1G79650.2 | Symbols: RAD23 | RAD23; damaged DNA binding |
chr1:29972406-29975132 REVERSE
Length = 366
Score = 94 bits (231), Expect = 7e-020
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
MK+ VKTLKG++FEI V P + VK+ IE +QG D YP +Q+LIH GKVLKD T+L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 338 ENQVAENSFIVIMLSKASPSGSS 406
EN+V E F+V+MLSK+ GS+
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGGSA 83
>TAIR9_protein||AT1G79650.3 | Symbols: RAD23 | RAD23; damaged DNA binding |
chr1:29972406-29975132 REVERSE
Length = 352
Score = 94 bits (231), Expect = 7e-020
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
MK+ VKTLKG++FEI V P + VK+ IE +QG D YP +Q+LIH GKVLKD T+L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 338 ENQVAENSFIVIMLSKASPSGSS 406
EN+V E F+V+MLSK+ GS+
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGGSA 83
>TAIR9_protein||AT1G79650.1 | Symbols: RAD23 | RAD23; damaged DNA binding |
chr1:29972406-29975132 REVERSE
Length = 372
Score = 94 bits (231), Expect = 7e-020
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
MK+ VKTLKG++FEI V P + VK+ IE +QG D YP +Q+LIH GKVLKD T+L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 338 ENQVAENSFIVIMLSKASPSGSS 406
EN+V E F+V+MLSK+ GS+
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGGSA 83
>TAIR9_protein||AT5G16090.1 | Symbols: | INVOLVED IN: protein modification
process; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation
elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940),
Ubiquitin-associated/translation elongation factor EF1B, N-terminal
(InterPro:IPR000449), Ubiquitin (InterPro:IPR000626), UV excision
repair protein Rad23, C-terminal (InterPro:IPR014761), UBA-like
(InterPro:IPR009060); BEST Arabidopsis thaliana protein match is:
RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3) (TAIR:AT3G02540.2); Has
550 Blast hits to 550 proteins in 137 species: Archae - 0; Bacteria -
0; Metazoa - 338; Fungi - 37; Plants - 110; Viruses - 26; Other
Eukaryotes - 39 (source: NCBI BLink). | chr5:5255797-5257230 REVERSE
Length = 172
Score = 85 bits (208), Expect = 3e-017
Identities = 41/76 (53%), Positives = 57/76 (75%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
MK+ VKTLKG FEIEV+P VA+VK+ IET GA YPA++Q+LIH+ + L+D TT+E
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 338 ENQVAENSFIVIMLSK 385
N+V + S I I+++K
Sbjct: 61 ANKVFDKSVIAIIITK 76
>TAIR9_protein||AT1G23410.1 | Symbols: | ubiquitin extension protein, putative
/ 40S ribosomal protein S27A (RPS27aA) | chr1:8314940-8315410 FORWARD
Length = 157
Score = 47 bits (110), Expect = 8e-006
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 57
Query: 338 ENQVAENS--FIVIMLSKASPSGSSSTQGAPK 427
+ + + S +V+ L + T PK
Sbjct: 58 DYNIQKESTLHLVLRLRGGAKKRKKKTYTKPK 89
>TAIR9_protein||AT1G65350.1 | Symbols: UBQ13 | UBQ13; protein binding |
chr1:24272518-24277275 REVERSE
Length = 320
Score = 47 bits (110), Expect = 8e-006
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 133
Query: 338 ENQVAENSFIVIM 376
+N E++ +++
Sbjct: 134 DNIQKESTLHLVL 146
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 57
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR9_protein||AT2G47110.1 | Symbols: UBQ6 | UBQ6; protein binding |
chr2:19344701-19345174 FORWARD
Length = 158
Score = 47 bits (110), Expect = 8e-006
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 57
Query: 338 ENQVAENS--FIVIMLSKASPSGSSSTQGAPK 427
+ + + S +V+ L + T PK
Sbjct: 58 DYNIQKESTLHLVLRLRGGAKKRKKKTYTKPK 89
>TAIR9_protein||AT3G62250.1 | Symbols: UBQ5 | UBQ5 (ubiquitin 5); protein
binding / structural constituent of ribosome | chr3:23037138-23037611
FORWARD
Length = 158
Score = 47 bits (110), Expect = 8e-006
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 57
Query: 338 ENQVAENS--FIVIMLSKASPSGSSSTQGAPK 427
+ + + S +V+ L + T PK
Sbjct: 58 DYNIQKESTLHLVLRLRGGAKKRKKKTYTKPK 89
>TAIR9_protein||AT1G31340.1 | Symbols: RUB1, NEDD8, ATRUB1 | RUB1 (RELATED TO
UBIQUITIN 1); protein binding | chr1:11218076-11219417 REVERSE
Length = 157
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 57
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR9_protein||AT2G35635.1 | Symbols: UBQ7, RUB2 | UBQ7; protein binding |
chr2:14981044-14981943 FORWARD
Length = 155
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 57
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR9_protein||AT2G36170.1 | Symbols: | ubiquitin extension protein 2 (UBQ2) /
60S ribosomal protein L40 (RPL40A) | chr2:15172153-15173046 FORWARD
Length = 129
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 57
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR9_protein||AT3G52590.1 | Symbols: UBQ1, EMB2167, ERD16, HAP4 | UBQ1
(UBIQUITIN EXTENSION PROTEIN 1); protein binding / structural
constituent of ribosome | chr3:19505668-19506681 FORWARD
Length = 129
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 57
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 58 DYNIQKESTLHLVL 71
>TAIR9_protein||AT4G05320.2 | Symbols: UBQ10 | UBQ10 (POLYUBIQUITIN 10); protein
binding | chr4:2718559-2719932 FORWARD
Length = 458
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 57
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 58 DYNIQKESTLHLVL 71
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 133
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 209
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 285
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 286 DYNIQKESTLHLVL 299
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 361
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 362 DYNIQKESTLHLVL 375
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 437
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 438 DYNIQKESTLHLVL 451
>TAIR9_protein||AT4G02890.1 | Symbols: UBQ14 | UBQ14; protein binding |
chr4:1278747-1279664 REVERSE
Length = 230
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 57
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 58 DYNIQKESTLHLVL 71
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 133
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 209
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 210 DYNIQKESTLHLVL 223
>TAIR9_protein||AT4G05050.1 | Symbols: UBQ11 | UBQ11 (UBIQUITIN 11); protein
binding | chr4:2588271-2588960 REVERSE
Length = 230
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 57
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 58 DYNIQKESTLHLVL 71
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 133
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 134 DYNIQKESTLHLVL 147
Score = 47 bits (109), Expect = 1e-005
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 158 MKVFVKTLKGTNFEIEVEPQQLVADVKQIIETAQGADVYPASKQMLIHQGKVLKDATTLE 337
M++FVKTL G +EVE + +VK I+ +G P +Q LI GK L+D TL
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLA 209
Query: 338 ENQVAENSFIVIML 379
+ + + S + ++L
Sbjct: 210 DYNIQKESTLHLVL 223
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,172,003,312
Number of Sequences: 33410
Number of Extensions: 4172003312
Number of Successful Extensions: 224782364
Number of sequences better than 0.0: 0
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