BLASTX 7.6.2
Query= RU24507 /QuerySize=1152
(1151 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G58640.1 | Symbols: | selenoprotein-related |... 254 1e-067
TAIR9_protein||AT5G58640.2 | Symbols: | selenoprotein-related |... 252 4e-067
TAIR9_protein||AT3G47300.1 | Symbols: SELT | SELT (SELT-LIKE PRO... 235 7e-062
>TAIR9_protein||AT5G58640.1 | Symbols: | selenoprotein-related |
chr5:23697996-23699505 FORWARD
Length = 229
Score = 254 bits (647), Expect = 1e-067
Identities = 127/223 (56%), Positives = 160/223 (71%), Gaps = 4/223 (1%)
Frame = -3
Query: 1125 MDRTQIVLLGLPLFLFCFDVLNLFTLRXXXXXXXXXXXXXXXXXXXXXXXXXXXDTLDFP 946
MDR Q++LLGLP+FLFC D+ NLFT +TLDFP
Sbjct: 1 MDRAQLILLGLPIFLFCSDLFNLFT-PPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFP 59
Query: 945 SQKP--IAGAVGVGNTVKISFCTSCSYKGTAVTMTKMLEAAYPGIEVVLSNYPPALPKRL 772
SQK + GA+G GNTV+I+FC SCSYKGTAVTM KMLE A+PG++V+L+NYPP PKRL
Sbjct: 60 SQKTSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRL 119
Query: 771 LSKLVPAVQFGIFGIVMGGEQLFPMVGMV-PPPWFYSLRANRFGTMASTWLLGNALQSFL 595
L+K+VP VQ G+ G+++ G+++ PM+G+ PP WF+SLRANRFG+MASTWL+GN LQS+L
Sbjct: 120 LAKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYL 179
Query: 594 QGTGAFEVSLNDELIFSKLQEGRFPGEIELRDAIGRKLVNSGI 466
Q +GAFEV N E +FSKL+EGRFPGEIELRD I + L I
Sbjct: 180 QSSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTLTRPSI 222
>TAIR9_protein||AT5G58640.2 | Symbols: | selenoprotein-related |
chr5:23697996-23699505 FORWARD
Length = 228
Score = 252 bits (642), Expect = 4e-067
Identities = 126/222 (56%), Positives = 159/222 (71%), Gaps = 3/222 (1%)
Frame = -3
Query: 1125 MDRTQIVLLGLPLFLFCFDVLNLFTLRXXXXXXXXXXXXXXXXXXXXXXXXXXXDTLDFP 946
MDR Q++LLGLP+FLFC D+ NLFT +TLDFP
Sbjct: 1 MDRAQLILLGLPIFLFCSDLFNLFT-PPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFP 59
Query: 945 SQ-KPIAGAVGVGNTVKISFCTSCSYKGTAVTMTKMLEAAYPGIEVVLSNYPPALPKRLL 769
SQ + GA+G GNTV+I+FC SCSYKGTAVTM KMLE A+PG++V+L+NYPP PKRLL
Sbjct: 60 SQTSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRLL 119
Query: 768 SKLVPAVQFGIFGIVMGGEQLFPMVGMV-PPPWFYSLRANRFGTMASTWLLGNALQSFLQ 592
+K+VP VQ G+ G+++ G+++ PM+G+ PP WF+SLRANRFG+MASTWL+GN LQS+LQ
Sbjct: 120 AKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYLQ 179
Query: 591 GTGAFEVSLNDELIFSKLQEGRFPGEIELRDAIGRKLVNSGI 466
+GAFEV N E +FSKL+EGRFPGEIELRD I + L I
Sbjct: 180 SSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTLTRPSI 221
>TAIR9_protein||AT3G47300.1 | Symbols: SELT | SELT (SELT-LIKE PROTEIN
PRECURSOR); selenium binding | chr3:17428685-17429555 REVERSE
Length = 210
Score = 235 bits (597), Expect = 7e-062
Identities = 111/169 (65%), Positives = 139/169 (82%), Gaps = 3/169 (1%)
Frame = -3
Query: 963 DTLDFPSQKPIAGAVGVGNTVKISFCTSCSYKGTAVTMTKMLEAAYPGIEVVLSNYPPAL 784
+TLDFP+QK + VG GNTV+I+FC SCSYKGTAV+M KMLE+ +PG++VVL+NYP
Sbjct: 41 ETLDFPAQK--STGVGYGNTVEINFCISCSYKGTAVSMKKMLESVFPGLDVVLANYPAPA 98
Query: 783 PKRLLSKLVPAVQFGIFGIVMGGEQLFPMVGMV-PPPWFYSLRANRFGTMASTWLLGNAL 607
PKR+L+K+VP Q G+ G++MGGEQ+FPM+G+ PP W++SLRANRFG+MASTWLLGN L
Sbjct: 99 PKRILAKVVPVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLLGNFL 158
Query: 606 QSFLQGTGAFEVSLNDELIFSKLQEGRFPGEIELRDAIGRKLVNSGITG 460
QSFLQ +GAFEVS N EL+FSKL+EGRFPGEIELRD I + +TG
Sbjct: 159 QSFLQSSGAFEVSCNGELVFSKLKEGRFPGEIELRDLISGTMTKPFVTG 207
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,229,259,576
Number of Sequences: 33410
Number of Extensions: 4229259576
Number of Successful Extensions: 229917074
Number of sequences better than 0.0: 0
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