BLASTX 7.6.2
Query= RU24513 /QuerySize=328
(327 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2 (UBI... 72 4e-014
TAIR9_protein||AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQU... 70 2e-013
TAIR9_protein||AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQU... 70 2e-013
TAIR9_protein||AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-con... 58 1e-009
>TAIR9_protein||AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2
(UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase |
chr2:774271-775149 FORWARD
Length = 153
Score = 72 bits (176), Expect = 4e-014
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = -3
Query: 325 NPNSPANSEAARMFSENKREYNRTIREIVEQSWTAD* 215
NPNSPANSEAARMFSE+KREYNR +RE+VEQSWTAD*
Sbjct: 117 NPNSPANSEAARMFSESKREYNRRVREVVEQSWTAD* 153
>TAIR9_protein||AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase | chr1:4927294-4928136 REVERSE
Length = 153
Score = 70 bits (170), Expect = 2e-013
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -3
Query: 325 NPNSPANSEAARMFSENKREYNRTIREIVEQSWTAD* 215
NPNSPANSEAARM+SE+KREYNR +R++VEQSWTAD*
Sbjct: 117 NPNSPANSEAARMYSESKREYNRRVRDVVEQSWTAD* 153
>TAIR9_protein||AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase | chr1:4927294-4928136 REVERSE
Length = 153
Score = 70 bits (170), Expect = 2e-013
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -3
Query: 325 NPNSPANSEAARMFSENKREYNRTIREIVEQSWTAD* 215
NPNSPANSEAARM+SE+KREYNR +R++VEQSWTAD*
Sbjct: 117 NPNSPANSEAARMYSESKREYNRRVRDVVEQSWTAD* 153
>TAIR9_protein||AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-conjugating enzyme
3); ubiquitin-protein ligase | chr5:25104679-25105465 FORWARD
Length = 151
Score = 58 bits (138), Expect = 1e-009
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = -3
Query: 325 NPNSPANSEAARMFSENKREYNRTIREIVEQSW 227
NP+SPAN+EAAR+FSENKREYNR + EIVEQS+
Sbjct: 117 NPDSPANAEAARLFSENKREYNRKVIEIVEQSY 149
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,229,259,576
Number of Sequences: 33410
Number of Extensions: 4229259576
Number of Successful Extensions: 229917074
Number of sequences better than 0.0: 0
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