BLASTX 7.6.2
Query= RU24666 /QuerySize=855
(854 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G17100.1 | Symbols: | transcription factor | ... 137 1e-032
TAIR9_protein||AT3G17100.2 | Symbols: | transcription factor | ... 137 1e-032
TAIR9_protein||AT1G09250.1 | Symbols: | transcription factor | ... 109 4e-024
TAIR9_protein||AT3G06590.1 | Symbols: | transcription factor | ... 91 6e-019
TAIR9_protein||AT3G06590.2 | Symbols: | transcription factor | ... 91 6e-019
TAIR9_protein||AT3G05800.1 | Symbols: | transcription factor | ... 87 9e-018
>TAIR9_protein||AT3G17100.1 | Symbols: | transcription factor |
chr3:5831552-5832244 FORWARD
Length = 231
Score = 137 bits (343), Expect = 1e-032
Identities = 72/117 (61%), Positives = 85/117 (72%), Gaps = 5/117 (4%)
Frame = +2
Query: 143 AVREAADRVLAVAAKGRTRWSRAILTNRLKLKF-----XXXXXXXXXXXXTGTGRLKKQK 307
AVRE ADR LAVAA+G+T WSRAIL+ +KLKF TG+ R KKQ+
Sbjct: 90 AVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQR 149
Query: 308 FSVFRLKGKGLPAVQRKVRVLGRLVPGCRKQPLPVILEEATDYIAALEMQVRAMSRL 478
+V RLK KGLPAVQRKV+VL RLVPGCRKQ LPV+LEE TDYIAA+EMQ+R M+ +
Sbjct: 150 ATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAI 206
>TAIR9_protein||AT3G17100.2 | Symbols: | transcription factor |
chr3:5831552-5832244 FORWARD
Length = 231
Score = 137 bits (343), Expect = 1e-032
Identities = 72/117 (61%), Positives = 85/117 (72%), Gaps = 5/117 (4%)
Frame = +2
Query: 143 AVREAADRVLAVAAKGRTRWSRAILTNRLKLKF-----XXXXXXXXXXXXTGTGRLKKQK 307
AVRE ADR LAVAA+G+T WSRAIL+ +KLKF TG+ R KKQ+
Sbjct: 90 AVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTTTTLTTGSIRSKKQR 149
Query: 308 FSVFRLKGKGLPAVQRKVRVLGRLVPGCRKQPLPVILEEATDYIAALEMQVRAMSRL 478
+V RLK KGLPAVQRKV+VL RLVPGCRKQ LPV+LEE TDYIAA+EMQ+R M+ +
Sbjct: 150 ATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAI 206
>TAIR9_protein||AT1G09250.1 | Symbols: | transcription factor |
chr1:2989509-2990132 FORWARD
Length = 208
Score = 109 bits (270), Expect = 4e-024
Identities = 59/113 (52%), Positives = 77/113 (68%), Gaps = 6/113 (5%)
Frame = +2
Query: 146 VREAADRVLAVAAKGRTRWSRAILTNRLKLKFXXXXXXXXXXXXTGTGRLKKQKFSVFRL 325
+R+ ADRVLA +A+G TRWSRAIL +R++ K TG + +K R+
Sbjct: 87 IRDTADRVLAASARGTTRWSRAILASRVRAKL---KKHRKAKKSTGNCKSRKGLTETNRI 143
Query: 326 KGKGLPAVQRKVRVLGRLVPGCRKQPLPVILEEATDYIAALEMQVRAMSRLTQ 484
K LPAV+RK+++LGRLVPGCRK +P +L+EATDYIAALEMQVRAM L +
Sbjct: 144 K---LPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVRAMEALAE 193
>TAIR9_protein||AT3G06590.1 | Symbols: | transcription factor |
chr3:2054647-2055312 REVERSE
Length = 222
Score = 91 bits (225), Expect = 6e-019
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = +2
Query: 278 TGTGRLKKQKFSVFRLKGKGLPAVQRKVRVLGRLVPGCRKQPLPVILEEATDYIAALEMQ 457
+ + R +K++ SV RL K +P V RKVRVLGRLVPGC KQ +PVILEEATDYI ALEMQ
Sbjct: 141 SSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQ 200
Query: 458 VRAMSRLTQ 484
VRAM+ L Q
Sbjct: 201 VRAMNSLVQ 209
Score = 60 bits (145), Expect = 1e-009
Identities = 35/79 (44%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +2
Query: 5 KYRKTQAAKFTPPKLLQALNQVXXXXXXXXXXXXXXXXXXXXXXXXAVREAADRVLAVAA 184
++R + + KL QAL QV AVREAADR LAV+A
Sbjct: 47 RWRSEKQQRIYSAKLFQALQQV-----RLNSSASTSSSPTAQKRGKAVREAADRALAVSA 101
Query: 185 KGRTRWSRAILTNRLKLKF 241
+GRT WSRAIL NR+KLKF
Sbjct: 102 RGRTLWSRAILANRIKLKF 120
>TAIR9_protein||AT3G06590.2 | Symbols: | transcription factor |
chr3:2054647-2055312 REVERSE
Length = 222
Score = 91 bits (225), Expect = 6e-019
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = +2
Query: 278 TGTGRLKKQKFSVFRLKGKGLPAVQRKVRVLGRLVPGCRKQPLPVILEEATDYIAALEMQ 457
+ + R +K++ SV RL K +P V RKVRVLGRLVPGC KQ +PVILEEATDYI ALEMQ
Sbjct: 141 SSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQ 200
Query: 458 VRAMSRLTQ 484
VRAM+ L Q
Sbjct: 201 VRAMNSLVQ 209
Score = 60 bits (145), Expect = 1e-009
Identities = 35/79 (44%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +2
Query: 5 KYRKTQAAKFTPPKLLQALNQVXXXXXXXXXXXXXXXXXXXXXXXXAVREAADRVLAVAA 184
++R + + KL QAL QV AVREAADR LAV+A
Sbjct: 47 RWRSEKQQRIYSAKLFQALQQV-----RLNSSASTSSSPTAQKRGKAVREAADRALAVSA 101
Query: 185 KGRTRWSRAILTNRLKLKF 241
+GRT WSRAIL NR+KLKF
Sbjct: 102 RGRTLWSRAILANRIKLKF 120
>TAIR9_protein||AT3G05800.1 | Symbols: | transcription factor |
chr3:1727476-1728111 FORWARD
Length = 212
Score = 87 bits (215), Expect = 9e-018
Identities = 53/113 (46%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Frame = +2
Query: 146 VREAADRVLAVAAKGRTRWSRAILTNRLKLKFXXXXXXXXXXXXTGTGRLKKQKFSVFRL 325
VR+ AD+VLA A+G TRWSRAIL +R ++ S R
Sbjct: 89 VRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAA--IRGSGGSGRRR 146
Query: 326 KGKGLPAVQRKVRVLGRLVPGCRKQPLPVILEEATDYIAALEMQVRAMSRLTQ 484
K L AV +VRVLG LVPGCR+ LP +L+E DYIAALEMQVRAM+ L++
Sbjct: 147 K---LSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSK 196
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,229,259,576
Number of Sequences: 33410
Number of Extensions: 4229259576
Number of Successful Extensions: 229917074
Number of sequences better than 0.0: 0
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