BLASTX 7.6.2
Query= RU24800 /QuerySize=910
(909 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G45190.1 | Symbols: AFO, FIL, YAB1 | AFO (ABNO... 253 1e-067
TAIR9_protein||AT4G00180.1 | Symbols: YAB3 | YAB3 (YABBY3); prot... 134 7e-032
TAIR9_protein||AT4G00180.2 | Symbols: YAB3 | YAB3 (YABBY3); prot... 134 7e-032
TAIR9_protein||AT1G08465.1 | Symbols: YAB2 | YAB2 (YABBY2); tran... 101 9e-022
TAIR9_protein||AT2G26580.1 | Symbols: YAB5 | YAB5 (YABBY5); tran... 101 9e-022
TAIR9_protein||AT2G26580.2 | Symbols: YAB5 | YAB5 (YABBY5); tran... 101 9e-022
TAIR9_protein||AT1G23420.1 | Symbols: INO | INO (INNER NO OUTER)... 75 7e-014
TAIR9_protein||AT1G69180.1 | Symbols: CRC | CRC (CRABS CLAW); tr... 72 6e-013
>TAIR9_protein||AT2G45190.1 | Symbols: AFO, FIL, YAB1 | AFO (ABNORMAL FLORAL
ORGANS); protein binding / transcription factor/ transcription
regulator | chr2:18628450-18630552 REVERSE
Length = 230
Score = 253 bits (646), Expect = 1e-067
Identities = 138/232 (59%), Positives = 167/232 (71%), Gaps = 11/232 (4%)
Frame = +1
Query: 28 LKMSAAASSNTVFSSPDHLSPSDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNL 207
+ MS+ +S ++ SPDH SPSD LCYV CNFC T+LAV+VP +SLFKTVTVRCG C+NL
Sbjct: 1 MSMSSMSSPSSAVCSPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNL 60
Query: 208 LSVNMRGLLLPAAAN-QRHLG-HSFFTPQNLPEEIRNAPSN----TFSNQPNMMMNESFM 369
LSVNMR +LPA+ Q LG HS+F PQ++ EE+R+APSN + P M SFM
Sbjct: 61 LSVNMRSYVLPASNQLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFM 120
Query: 370 PMIRGVEEIXXXXXXXXXXXXXXQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKN 549
+ + E QRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKN
Sbjct: 121 DLHQQHE--IPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKN 178
Query: 550 WAHFPHIHFGLMPD-QPVKKANI-RQDGEDMLIKDNGFFS-APANLGVSPY* 696
WAHFPHIHFGL+PD QPVKK N+ +Q+GED ++ GF++ A AN+GV+PY*
Sbjct: 179 WAHFPHIHFGLVPDNQPVKKTNMPQQEGEDNMVMKEGFYAPAAANVGVTPY* 230
>TAIR9_protein||AT4G00180.1 | Symbols: YAB3 | YAB3 (YABBY3); protein binding /
transcription factor | chr4:72804-75089 REVERSE
Length = 241
Score = 134 bits (337), Expect = 7e-032
Identities = 66/85 (77%), Positives = 74/85 (87%), Gaps = 2/85 (2%)
Frame = +1
Query: 439 QRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQ-PVKKANI 615
QRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLM D P KKAN+
Sbjct: 154 QRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANV 213
Query: 616 R-QDGEDMLIKDNGFFSAPANLGVS 687
R Q+GED ++ GF+ + AN+GV+
Sbjct: 214 RQQEGEDGMMGREGFYGSAANVGVA 238
Score = 122 bits (304), Expect = 5e-028
Identities = 71/116 (61%), Positives = 81/116 (69%), Gaps = 15/116 (12%)
Frame = +1
Query: 34 MSAAASSNTVFSSPDHLSPSDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNLLS 213
MS ++SS F PDH S +DQLCYVHC+FCDTVLAVSVP SSLFKTVTVRCGHCSNLLS
Sbjct: 4 MSMSSSSAPAF-PPDHFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLS 62
Query: 214 --VNMRGLLLPAAANQRHLGHSFF------TPQNLPEEIRNAPSNTFSNQPNMMMN 357
V+MR LLLP+ +N LGHSF P NL EE+R+ N NMMM+
Sbjct: 63 VTVSMRALLLPSVSN---LGHSFLPPPPPPPPPNLLEEMRSGGQNI---NMNMMMS 112
>TAIR9_protein||AT4G00180.2 | Symbols: YAB3 | YAB3 (YABBY3); protein binding /
transcription factor | chr4:72804-74888 REVERSE
Length = 210
Score = 134 bits (337), Expect = 7e-032
Identities = 66/85 (77%), Positives = 74/85 (87%), Gaps = 2/85 (2%)
Frame = +1
Query: 439 QRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQ-PVKKANI 615
QRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLM D P KKAN+
Sbjct: 123 QRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPTKKANV 182
Query: 616 R-QDGEDMLIKDNGFFSAPANLGVS 687
R Q+GED ++ GF+ + AN+GV+
Sbjct: 183 RQQEGEDGMMGREGFYGSAANVGVA 207
Score = 77 bits (188), Expect = 1e-014
Identities = 49/86 (56%), Positives = 55/86 (63%), Gaps = 14/86 (16%)
Frame = +1
Query: 124 CDTVLAVSVPCSSLFKTVTVRCGHCSNLLS--VNMRGLLLPAAANQRHLGHSFF------ 279
CD VSVP SSLFKTVTVRCGHCSNLLS V+MR LLLP+ +N LGHSF
Sbjct: 2 CDINWQVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSN---LGHSFLPPPPPP 58
Query: 280 TPQNLPEEIRNAPSNTFSNQPNMMMN 357
P NL EE+R+ N NMMM+
Sbjct: 59 PPPNLLEEMRSGGQNI---NMNMMMS 81
>TAIR9_protein||AT1G08465.1 | Symbols: YAB2 | YAB2 (YABBY2); transcription
factor | chr1:2676033-2679382 FORWARD
Length = 185
Score = 101 bits (250), Expect = 9e-022
Identities = 51/74 (68%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Frame = +1
Query: 439 QRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQPVKKANIR 618
QRVPSAYNRFIKEEIQRIKA NP+ISHREAFS AAKNWAHFPHIHFGL D K +
Sbjct: 113 QRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGNKKGKQLD 172
Query: 619 QDGEDMLIKDNGFF 660
Q K NG++
Sbjct: 173 QSVAGQ--KSNGYY 184
Score = 75 bits (183), Expect = 5e-014
Identities = 31/44 (70%), Positives = 40/44 (90%)
Frame = +1
Query: 91 SDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNLLSVNM 222
S+++CYVHC+FC T+LAVSVP +SLF VTVRCGHC+NLLS+N+
Sbjct: 7 SERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNI 50
>TAIR9_protein||AT2G26580.1 | Symbols: YAB5 | YAB5 (YABBY5); transcription
factor | chr2:11303923-11306739 REVERSE
Length = 165
Score = 101 bits (250), Expect = 9e-022
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = +1
Query: 439 QRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLM 585
QRVPSAYN+FIKEEIQRIKA NPDISHREAFS AAKNWAHFPHIHFGLM
Sbjct: 106 QRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM 154
Score = 78 bits (191), Expect = 6e-015
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1
Query: 91 SDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNLLSVNMRGLL 234
++QLCY+ CNFC+ +LAV+VPCSSLF VTVRCGHC+NL SVNM L
Sbjct: 8 TEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAAL 55
>TAIR9_protein||AT2G26580.2 | Symbols: YAB5 | YAB5 (YABBY5); transcription
factor | chr2:11303923-11306739 REVERSE
Length = 165
Score = 101 bits (250), Expect = 9e-022
Identities = 46/49 (93%), Positives = 47/49 (95%)
Frame = +1
Query: 439 QRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLM 585
QRVPSAYN+FIKEEIQRIKA NPDISHREAFS AAKNWAHFPHIHFGLM
Sbjct: 106 QRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM 154
Score = 78 bits (191), Expect = 6e-015
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +1
Query: 91 SDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNLLSVNMRGLL 234
++QLCY+ CNFC+ +LAV+VPCSSLF VTVRCGHC+NL SVNM L
Sbjct: 8 TEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAAL 55
>TAIR9_protein||AT1G23420.1 | Symbols: INO | INO (INNER NO OUTER); protein
binding / transcription factor | chr1:8317423-8319104 FORWARD
Length = 232
Score = 75 bits (182), Expect = 7e-014
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +1
Query: 439 QRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIH 573
QR PSAYN FIKEEI+R+KA NP ++H+EAFS AAKNWAHFP H
Sbjct: 136 QRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAH 180
Score = 64 bits (155), Expect = 9e-011
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +1
Query: 97 QLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNLLSVNM 222
Q+C+V C FC T+L VSVP +SL VTVRCGHC++LLSVN+
Sbjct: 20 QICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNL 61
>TAIR9_protein||AT1G69180.1 | Symbols: CRC | CRC (CRABS CLAW); transcription
factor | chr1:26007734-26008940 REVERSE
Length = 182
Score = 72 bits (174), Expect = 6e-013
Identities = 31/41 (75%), Positives = 38/41 (92%)
Frame = +1
Query: 439 QRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHF 561
QR+PSAYNRF+++EIQRIK+ NP+I HREAFSAAAKNWA +
Sbjct: 116 QRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKY 156
Score = 54 bits (127), Expect = 2e-007
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +1
Query: 91 SDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNL 207
++ L YV C+ C+T+LAV +P + TVTV+CGHC NL
Sbjct: 18 AEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNL 56
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,287,271,046
Number of Sequences: 33410
Number of Extensions: 4287271046
Number of Successful Extensions: 235057511
Number of sequences better than 0.0: 0
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